FFCP PHASE1:Hg19::chr11:131781197..131781214,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-120bp_to_ENST00000479431_5end | |association_with_transcript=-120bp_to_ENST00000479431_5end | ||
|cluster_id=chr11:131781197..131781214,+ | |||
|coexpression_cluster_id=C2112 | |||
|description=CAGE_peak_14_at_NTM_5end | |description=CAGE_peak_14_at_NTM_5end | ||
|id=chr11:131781197..131781214,+ | |id=chr11:131781197..131781214,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.56e-17!180;CL:0000359!7.14e-12!32;CL:0000680!1.03e-11!57;CL:0000056!1.03e-11!57;CL:0000355!1.03e-11!57;CL:0000057!5.83e-11!75;CL:0000187!3.75e-10!54;CL:0000192!9.49e-10!42;CL:0000514!9.49e-10!42;CL:0000183!3.36e-09!59;CL:0000393!2.98e-08!60;CL:0000211!2.98e-08!60;CL:0002371!8.47e-08!591 | |ontology_enrichment_celltype=CL:0000055!1.56e-17!180;CL:0000359!7.14e-12!32;CL:0000680!1.03e-11!57;CL:0000056!1.03e-11!57;CL:0000355!1.03e-11!57;CL:0000057!5.83e-11!75;CL:0000187!3.75e-10!54;CL:0000192!9.49e-10!42;CL:0000514!9.49e-10!42;CL:0000183!3.36e-09!59;CL:0000393!2.98e-08!60;CL:0000211!2.98e-08!60;CL:0002371!8.47e-08!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-12;32!CL:0002594;2.09e-12;4!CL:0002621;2.25e-09;3!CL:0002536;5.81e-08;2!CL:0002539;2.40e-07;10!CL:0000192;3.64e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.04e-13,32;CL:0002594,1.22e-12,4;CL:0002621,1.38e-09,3;CL:0000192,5.25e-09,43;CL:0000514,5.25e-09,43;CL:0000680,3.80e-08,58;CL:0000056,3.80e-08,58;CL:0000355,3.80e-08,58;CL:0002536,5.87e-08,2;CL:0002539,1.30e-07,10;CL:0000187,1.40e-07,55 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.57e-10;3!CL:0000514;3.64e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.63e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.11e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.57e-13,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.83e-14!83;UBERON:0002329!3.83e-14!83;UBERON:0003077!3.83e-14!83;UBERON:0003059!3.83e-14!83;UBERON:0007282!3.83e-14!83;UBERON:0009618!3.83e-14!83;UBERON:0007285!3.83e-14!83;UBERON:0000486!1.69e-11!82;UBERON:0000475!9.73e-11!365;UBERON:0001134!2.78e-10!61;UBERON:0002036!2.78e-10!61;UBERON:0003082!2.78e-10!61;UBERON:0000119!1.04e-09!312;UBERON:0002385!1.21e-09!63;UBERON:0001015!1.21e-09!63;UBERON:0000383!1.21e-09!63;UBERON:0000483!2.36e-09!309;UBERON:0004290!3.95e-09!70;UBERON:0000467!4.92e-08!625;UBERON:0003129!5.33e-08!11;UBERON:0000480!5.95e-08!626;UBERON:0001637!6.00e-08!42;UBERON:0003509!6.00e-08!42;UBERON:0004572!6.00e-08!42;UBERON:0004872!9.27e-08!84;UBERON:0000075!1.17e-07!13;UBERON:0005944!1.17e-07!13;UBERON:0004288!1.17e-07!13;UBERON:0003089!1.17e-07!13;UBERON:0004573!4.99e-07!33;UBERON:0004571!4.99e-07!33;UBERON:0000468!7.53e-07!659;UBERON:0005256!8.66e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.09e-12;4!UBERON:0001949;2.25e-09;3!UBERON:0000992;7.92e-08;13!UBERON:0001637;8.91e-08;42!UBERON:0003509;8.91e-08;42!UBERON:0004572;8.91e-08;42!UBERON:0002119;2.09e-07;4!UBERON:0004237;2.40e-07;10!UBERON:0004695;2.40e-07;10!UBERON:0002111;2.40e-07;10!UBERON:0004178;2.40e-07;10!UBERON:0004573;5.04e-07;33!UBERON:0004571;5.04e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.22e-12,4;UBERON:0001637,5.10e-11,42;UBERON:0003509,5.10e-11,42;UBERON:0004572,5.10e-11,42;UBERON:0001949,1.38e-09,3;UBERON:0000486,1.77e-09,83;UBERON:0000992,5.16e-08,13;UBERON:0007524,1.04e-07,73;UBERON:0004237,1.30e-07,10;UBERON:0004695,1.30e-07,10;UBERON:0002111,1.30e-07,10;UBERON:0004178,1.30e-07,10;UBERON:0002119,1.62e-07,4;UBERON:0004872,1.76e-07,83;UBERON:0001134,2.08e-07,62;UBERON:0002036,2.08e-07,62;UBERON:0003082,2.08e-07,62;UBERON:0004573,2.48e-07,33;UBERON:0004571,2.48e-07,33;UBERON:0002385,4.48e-07,64;UBERON:0001015,4.48e-07,64;UBERON:0000383,4.48e-07,64;UBERON:0002329,4.90e-07,71;UBERON:0003059,4.90e-07,71;UBERON:0007282,4.90e-07,71;UBERON:0004290,4.90e-07,71;UBERON:0009618,4.90e-07,71;UBERON:0007500,6.14e-07,59;UBERON:0001981,6.14e-07,59;UBERON:0004537,6.14e-07,59;UBERON:0006965,6.14e-07,59;UBERON:0003077,6.85e-07,72;UBERON:0007285,6.85e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,6.11635841964482,16.6173196283926,0,0.331397375727916,0,1.20538905604795,1.46062018077475,1.46379839637152,0.246242116153576,0,0.313454721478088,0,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0.919421224478927,2.10844143144775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.702678285545008,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,0,4.01571269048339,0.709336764396714,0.560677600142307,1.06748995729705,0.49333509683432,0,0,0.163461903113459,0,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0,0,0.989067717114227,0,0,0.336672227908132,0.250237039743928,0.831192346452549,0,0.612975591598039,0.600952235626387,0,1.25572744982203,0.213557388818567,0.211931901159562,0,0.515262646192195,0.257640540045629,0.37223371266318,1.0126579934476,1.16924406193438,0,0,0,1.06502877754984,0.503760491138201,0,1.73934767846967,1.36373060295417,1.14721838155602,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.502644862058154,1.20364978706088,0,0,0,0.115930404975077,2.7003999674239,0,0,0,0,0,0,0,0,0.93733833986777,3.19166043577833,0.992425680696705,0.626909658919938,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0.381988425558278,0,0,0.205654985406647,0,0,0.112131084345361,0,0.1466765716419,3.23179289394444,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,1.10621501125022,0.434418072340414,0,0,0,0,0,0,4.99306318531491,4.83824469327489,0,0.306923946576125,0.280660094433074,0,0.511707249066704,0.804269605718038,0,0.462629081407967,2.13074070375753,0.739144404124282,1.03850885836724,0.697262270759755,0,2.80709058424599,0,0.114814448164607,0,0,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0.676695028044854,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,1.15699440752685,2.69066094311149,1.65896526242959,0.50578890427775,0.464845549297286,7.870308670766,0.6970372701606,0,0,1.73986598415015,2.22389062924704,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,1.01091240786658,0,0.842516912477962,0,0.974853958525138,1.05650146756755,0.136499911407986,0,0,0,0.66343897524122,2.19225442626881,0,0,1.62328301570163,1.54911749049875,3.09865162785466,0.430234056612155,0.0982490410131212,1.07001315444375,0.354761064070598,0.422215270595328,0,0,0,0.673554789078584,0,1.08890984861323,0,0.43050537267123,0,0.443430153536676,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11308705022906,0,0,0,0,0,0.613612095012929,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,1.54810963903714,1.18219047581419,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0.959293472527256,1.19228767021794,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.653174720218818,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.467426619694449,0.554805861502613,0.568209015825267,0.251567901752575,0,0.228840068396924,1.05861646634267,0.466311601748341,0.73927574994817,1.27437413730962,2.69881867298163,1.39736661188633,0,1.86089200190596,2.60872530905867,0,0,1.22061219961398,0.181848659202559,0.966695013382396,2.32016879939247,1.99047944349308,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,1.06013487567529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0.128458450192919,0,0.159633859057151,0,0,0.345786262321089,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0.337687923091973,0.781078098613847,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0.5290268405154,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.336395587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| ||
|short_description=p14@NTM | |short_description=p14@NTM | ||
}} | }} |
Latest revision as of 19:04, 16 September 2015
Short description: | p14@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NTM_5end |
Coexpression cluster: | C2112_Smooth_Amniotic_mesenchymal_Myoblast_Fibroblast_Lens_cerebellum |
Association with transcript: | -120bp_to_ENST00000479431_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.04e-13 | 32 |
smooth muscle cell of the umbilical artery | 1.22e-12 | 4 |
gingival epithelial cell | 1.38e-09 | 3 |
smooth muscle cell | 5.25e-09 | 43 |
smooth muscle myoblast | 5.25e-09 | 43 |
muscle precursor cell | 3.80e-08 | 58 |
myoblast | 3.80e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.80e-08 | 58 |
amniotic epithelial cell | 5.87e-08 | 2 |
aortic smooth muscle cell | 1.30e-07 | 10 |
muscle cell | 1.40e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.22e-12 | 4 |
artery | 5.10e-11 | 42 |
arterial blood vessel | 5.10e-11 | 42 |
arterial system | 5.10e-11 | 42 |
gingival epithelium | 1.38e-09 | 3 |
multilaminar epithelium | 1.77e-09 | 83 |
female gonad | 5.16e-08 | 13 |
dense mesenchyme tissue | 1.04e-07 | 73 |
blood vessel smooth muscle | 1.30e-07 | 10 |
arterial system smooth muscle | 1.30e-07 | 10 |
artery smooth muscle tissue | 1.30e-07 | 10 |
aorta smooth muscle tissue | 1.30e-07 | 10 |
left ovary | 1.62e-07 | 4 |
splanchnic layer of lateral plate mesoderm | 1.76e-07 | 83 |
skeletal muscle tissue | 2.08e-07 | 62 |
striated muscle tissue | 2.08e-07 | 62 |
myotome | 2.08e-07 | 62 |
systemic artery | 2.48e-07 | 33 |
systemic arterial system | 2.48e-07 | 33 |
muscle tissue | 4.48e-07 | 64 |
musculature | 4.48e-07 | 64 |
musculature of body | 4.48e-07 | 64 |
somite | 4.90e-07 | 71 |
presomitic mesoderm | 4.90e-07 | 71 |
presumptive segmental plate | 4.90e-07 | 71 |
dermomyotome | 4.90e-07 | 71 |
trunk paraxial mesoderm | 4.90e-07 | 71 |
epithelial tube open at both ends | 6.14e-07 | 59 |
blood vessel | 6.14e-07 | 59 |
blood vasculature | 6.14e-07 | 59 |
vascular cord | 6.14e-07 | 59 |
paraxial mesoderm | 6.85e-07 | 72 |
presumptive paraxial mesoderm | 6.85e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.57e-13 | 14 |