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FFCP PHASE1:Mm9::chr13:58909180..58909199,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18212
|EntrezGene=18212
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P15209
|UniProt=P15209
|association_with_transcript=0bp_to_NM_001025074,uc007quj.1_5end
|association_with_transcript=0bp_to_NM_001025074,uc007quj.1_5end
|cluster_id=chr13:58909180..58909199,+
|description=CAGE_peak_3_at_Ntrk2_5end
|description=CAGE_peak_3_at_Ntrk2_5end
|id=chr13:58909180..58909199,+
|id=chr13:58909180..58909199,+
|ontology_enrichment_celltype=CL:0000117!1.92e-12!23;CL:0000337!1.92e-12!23;CL:0002319!1.12e-09!43;CL:0000221!1.20e-09!44;CL:0000133!1.20e-09!44
|ontology_enrichment_celltype=CL:0000117!1.92e-12!23;CL:0000337!1.92e-12!23;CL:0002319!1.12e-09!43;CL:0000221!1.20e-09!44;CL:0000133!1.20e-09!44
|ontology_enrichment_celltype_v019_2=CL:0000117,5.47e-14,23;CL:0000337,5.47e-14,23;CL:0002319,5.92e-11,43;CL:0000221,6.40e-11,44;CL:0000133,6.40e-11,44;CL:0000540,2.75e-07,33;CL:0000047,2.75e-07,33;CL:0000031,2.75e-07,33;CL:0000404,2.75e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.18e-28!102;UBERON:0000924!3.18e-28!102;UBERON:0006601!3.18e-28!102;UBERON:0001049!4.80e-28!52;UBERON:0005068!4.80e-28!52;UBERON:0006241!4.80e-28!52;UBERON:0007135!4.80e-28!52;UBERON:0000955!3.83e-27!50;UBERON:0006238!3.83e-27!50;UBERON:0001017!5.01e-27!73;UBERON:0005743!5.01e-27!73;UBERON:0000073!7.84e-27!75;UBERON:0001016!7.84e-27!75;UBERON:0000033!8.22e-27!63;UBERON:0002616!2.09e-26!49;UBERON:0002346!4.90e-25!71;UBERON:0003075!4.90e-25!71;UBERON:0007284!4.90e-25!71;UBERON:0003056!8.15e-22!49;UBERON:0003080!1.43e-21!40;UBERON:0002780!6.25e-21!39;UBERON:0001890!6.25e-21!39;UBERON:0006240!6.25e-21!39;UBERON:0002020!2.25e-20!34;UBERON:0002791!1.41e-17!29;UBERON:0003528!1.41e-17!29;UBERON:0001893!1.41e-17!29;UBERON:0007811!2.75e-13!86;UBERON:0000956!3.06e-13!21;UBERON:0001869!3.06e-13!21;UBERON:0000203!3.06e-13!21;UBERON:0000153!3.21e-13!94;UBERON:0002619!1.09e-11!17;UBERON:0002021!2.97e-08!10;UBERON:0000411!2.97e-08!10;UBERON:0001950!2.97e-08!10;UBERON:0000025!5.21e-07!114;UBERON:0003076!6.09e-07!12;UBERON:0003057!6.09e-07!12;UBERON:0004111!6.11e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.78e-33,54;UBERON:0004121,5.59e-32,95;UBERON:0000924,5.59e-32,95;UBERON:0006601,5.59e-32,95;UBERON:0001049,7.98e-32,52;UBERON:0005068,7.98e-32,52;UBERON:0006241,7.98e-32,52;UBERON:0007135,7.98e-32,52;UBERON:0001017,2.40e-31,73;UBERON:0001016,1.30e-30,75;UBERON:0010371,3.88e-30,73;UBERON:0002346,2.38e-29,64;UBERON:0003075,2.38e-29,64;UBERON:0007284,2.38e-29,64;UBERON:0000955,1.54e-28,47;UBERON:0006238,1.54e-28,47;UBERON:0002616,1.04e-27,46;UBERON:0003056,1.06e-24,49;UBERON:0003080,2.02e-24,40;UBERON:0002780,1.09e-23,39;UBERON:0001890,1.09e-23,39;UBERON:0006240,1.09e-23,39;UBERON:0002020,4.72e-23,34;UBERON:0003528,7.45e-20,29;UBERON:0002791,7.45e-20,29;UBERON:0001893,7.45e-20,29;UBERON:0010314,1.10e-17,92;UBERON:0000956,6.71e-15,21;UBERON:0001869,6.71e-15,21;UBERON:0000203,6.71e-15,21;UBERON:0002619,3.97e-13,17;UBERON:0002021,3.32e-09,10;UBERON:0000411,3.32e-09,10;UBERON:0001950,3.32e-09,10;UBERON:0003076,1.04e-07,12;UBERON:0003057,1.04e-07,12
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,23.9827672018491,39.5435128922049,57.3568202269136,16.5183977517928,38.8131923785423,0,0,0,0,0,1.54701627683233,17.3992156339254,24.8625760257855,20.9164363157039,0.338844532069132,4.4464739805557,0,0,0,32.6564120465061,67.238203431272,6.947204024668,7.69533848490637,6.30974884054146,22.8520787523043,27.6085676189517,9.92175473641128,9.39285615978716,18.3843757322004,36.3382407297983,38.9446381159823,22.1193407888991,15.4306956644327,13.631658896759,10.939180781692,40.4815348552002,27.0126052815206,39.421947926417,26.5165726926301,22.7794689278565,24.4183274031144,0.605809546665472,2.72057616384428,0,0,0,0,0,0,1.68533304158102,0,0,0,1.54927761754349,0,0,0,0,0,0,2.05530983494308,1.03575153458869,2.22663208597237,0.867426633830679,1.52232739156071,1.15307748628029,1.05505848386836,2.11659672844269,2.63899841792318,0.494389935468748,9.39895819979426,0.884610551949874,0.808834249737046,0.883366073841574,0.969750506270444,0,23.7152445579353,23.458031163107,0,0,0,0,34.4518470631092,36.6000482254901,21.2355855070741,36.1554585999935,35.2887331115856,29.9214784165767,32.9349764027548,6.21220119486929,1.36847667671102,1.0108910337347,3.15662783829711,1.30120442962704,2.98872735763515,2.16074555766419,2.71268672104287,2.10913147369116,2.562274405697,3.65436725782942,4.9153640440413,0.646703978798527,0.567318240503458,0.703804496655795,1.97276159184817,1.66828349535359,2.43776516565517,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,29.8611726961061,10.7020796874456,0.330418782983798,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.561086559122548,0.442655759869801,0.738050739898011,0,0.370191491765402,0.592905254174298,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,1.89491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,1.57635144106191,1.32878813789265,1.11618338060241,1.14704320301017,1.20879487306127,2.31438493730419,0,0,1.96705709207614,3.58717770196152,20.3899249284496,23.3251256318484,0,1.76729649043061,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,39.8438432363041,3.69044221541498,8.72521457969551,9.44744364250741,6.10389454998381,1.32745138339963,1.94224508923985,1.209294227859,3.01768127609437,2.06711325016541,1.22974059177571,2.32585463851399,0.727067458955011,1.78248689192361,0.948110273807448,0,1.03135543248187,7.83011093233712,2.16073312837572,4.13947788104814,3.85806663056866,4.78818630834139,9.81028496811388,7.0756078858912,7.30715877875038,2.3467170806371,1.0591603543191,0.661585194164886,3.79238381765404,1.61464426695906,1.62844897306021,2.50681922406587,3.61109979439135,0,21.3239097312086,0,7.01715351074956,4.07427960213366,0,0.136694227721025,0.228778173206523,0,0,0,0,0,1.21991680276109,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.330613822901344,0.785267825952089,0,0,0,0,0,0.972255941720238,1.16243841129958,2.36538575687089,3.52071715937262,2.3436789271911,0.734015410979976,0.724752362478018,0.864090018773596,0,3.24360344464263,0.616265742988964,0.389762468933385,0.716106782669926,0,0.240390899039938,0.295379054349154,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0,5.66825959038028,0,0,0,0.965947970160952,7.88266396894964,3.84618410961257,3.42989406526505,0,58.1694397895579,50.1754507792823,50.9877006961063,53.6181928912305,41.7900337060092,37.769694869485,54.0018000185445,58.5417564191487,63.8930796667728,68.8621214629921,0.726511433089237,2.79317411380722,2.56100408631201,3.8897074730927,2.30574478890781,1.65459157605013,4.66718128383392,3.7086310303001,4.49286893428541,3.53776096469316,4.30914809813408,4.52703219326583,3.93294331373506,3.45735822986294,3.79074095107048,4.28664322154766,4.28772005995965,3.47236596834669,5.35711671044299,3.82717192349433,4.4573002810104,4.2594193478241,3.33810665926249,3.63366041580821,4.14081273827455,3.46919892355874,3.10977553883713,2.36762740294059,4.07412341537585,3.36685362994643,4.03359061622192,3.15214343601803,3.6830793885272,3.40861050609125,5.01557188550968,8.74337022782811,6.78401664491684,4.72716318906256,5.54736162999646,3.75005412503176,3.70988536992674
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,23.9827672018491,39.5435128922049,57.3568202269136,16.5183977517928,38.8131923785423,0,0,0,0,0,1.54701627683233,17.3992156339254,24.8625760257855,20.9164363157039,0.338844532069132,4.4464739805557,0,0,0,32.6564120465061,67.238203431272,6.947204024668,7.69533848490637,6.30974884054146,22.8520787523043,27.6085676189517,9.92175473641128,9.39285615978716,18.3843757322004,36.3382407297983,38.9446381159823,22.1193407888991,15.4306956644327,13.631658896759,10.939180781692,40.4815348552002,27.0126052815206,39.421947926417,26.5165726926301,22.7794689278565,24.4183274031144,0.605809546665472,2.72057616384428,0,0,0,0,0,0,1.68533304158102,0,0,0,1.54927761754349,0,0,0,0,0,0,2.05530983494308,1.03575153458869,2.22663208597237,0.867426633830679,1.52232739156071,1.15307748628029,1.05505848386836,2.11659672844269,2.63899841792318,0.494389935468748,9.39895819979426,0.884610551949874,0.808834249737046,0.883366073841574,0.969750506270444,0,23.7152445579353,23.458031163107,0,0,0,0,34.4518470631092,36.6000482254901,21.2355855070741,36.1554585999935,35.2887331115856,29.9214784165767,32.9349764027548,6.21220119486929,1.36847667671102,1.0108910337347,3.15662783829711,1.30120442962704,2.98872735763515,2.16074555766419,2.71268672104287,2.10913147369116,2.562274405697,3.65436725782942,4.9153640440413,0.646703978798527,0.567318240503458,0.703804496655795,1.97276159184817,1.66828349535359,2.43776516565517,2.05782136407943,2.18937693500343,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,29.8611726961061,10.7020796874456,0.330418782983798,0,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,1.1270773567308,0,0.193952487167626,0.561086559122548,0.442655759869801,0.738050739898011,0,0.370191491765402,0.592905254174298,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.739012760666419,1.89491411770485,0.325929952884052,0.509235257325564,0.234690248288502,0.335012514883631,0.476087281772027,0.585400943573396,1.57635144106191,1.32878813789265,1.11618338060241,1.14704320301017,1.20879487306127,2.31438493730419,0,0,1.96705709207614,3.58717770196152,20.3899249284496,23.3251256318484,0,1.76729649043061,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0,39.8438432363041,3.69044221541498,8.72521457969551,9.44744364250741,6.10389454998381,1.32745138339963,1.94224508923985,1.209294227859,3.01768127609437,2.06711325016541,1.22974059177571,2.32585463851399,0.727067458955011,1.78248689192361,0.948110273807448,0,1.03135543248187,7.83011093233712,2.16073312837572,4.13947788104814,3.85806663056866,4.78818630834139,9.81028496811388,7.0756078858912,7.30715877875038,2.3467170806371,1.0591603543191,0.661585194164886,3.79238381765404,1.61464426695906,1.62844897306021,2.50681922406587,3.61109979439135,0,21.3239097312086,0,7.01715351074956,4.07427960213366,0,0.136694227721025,0.228778173206523,0,0,0,0,0,1.21991680276109,0.108005340821801,0.627264888043406,0.218362563746178,0.674321731924103,0.330613822901344,0.785267825952089,0,0,0,0,0,0.972255941720238,1.16243841129958,2.36538575687089,3.52071715937262,2.3436789271911,0.734015410979976,0.724752362478018,0.864090018773596,0,3.24360344464263,0.616265742988964,0.389762468933385,0.716106782669926,0,0.240390899039938,0.295379054349154,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0,5.66825959038028,0,0,0,0.965947970160952,7.88266396894964,3.84618410961257,3.42989406526505,0,58.1694397895579,50.1754507792823,50.9877006961063,53.6181928912305,41.7900337060092,37.769694869485,54.0018000185445,58.5417564191487,63.8930796667728,68.8621214629921,0.726511433089237,2.79317411380722,2.56100408631201,3.8897074730927,2.30574478890781,1.65459157605013,4.66718128383392,3.7086310303001,4.49286893428541,3.53776096469316,4.30914809813408,4.52703219326583,3.93294331373506,3.45735822986294,3.79074095107048,4.28664322154766,4.28772005995965,3.47236596834669,5.35711671044299,3.82717192349433,4.4573002810104,4.2594193478241,3.33810665926249,3.63366041580821,4.14081273827455,3.46919892355874,3.10977553883713,2.36762740294059,4.07412341537585,3.36685362994643,4.03359061622192,3.15214343601803,3.6830793885272,3.40861050609125,5.01557188550968,8.74337022782811,6.78401664491684,4.72716318906256,5.54736162999646,3.75005412503176,3.70988536992674
|short_description=p3@Ntrk2
|short_description=p3@Ntrk2
}}
}}

Latest revision as of 20:02, 1 October 2015

Short description:p3@Ntrk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ntrk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_NM_001025074, uc007quj.1_5end
EntrezGene:Ntrk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ntrk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C223.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B839.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C357.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E324.86
Mouse Granule cells, donor3.CNhs12108.11636-122C720.92
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C832.66
Mouse Microglia, donor2.CNhs12634.11736-123E867.24
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E527.01
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D626.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F622.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B223.72
cerebellum, neonate N30.CNhs11135.1395-42I223.46
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A434.45
corpus striatum, adult.CNhs10487.19-21D836.60
corpus striatum, neonate N00.CNhs11226.630-43F121.24
cortex, adult.CNhs10473.12-14D536.16
cortex, neonate N30.CNhs11107.1392-42F235.29
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B232.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E829.86
hippocampus, neonate N00.CNhs11228.627-43G110.70
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C220.39
medulla oblongata, neonate N30.CNhs11200.1396-42A323.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I939.84
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C921.32
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A158.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.99
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D753.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.79
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.54
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A968.86
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.47e-1423
neuroblast (sensu Vertebrata)5.47e-1423
neural cell5.92e-1143
ectodermal cell6.40e-1144
neurectodermal cell6.40e-1144
neuron2.75e-0733
neuronal stem cell2.75e-0733
neuroblast2.75e-0733
electrically signaling cell2.75e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.78e-3354
ectoderm-derived structure5.59e-3295
ectoderm5.59e-3295
presumptive ectoderm5.59e-3295
neural tube7.98e-3252
neural rod7.98e-3252
future spinal cord7.98e-3252
neural keel7.98e-3252
central nervous system2.40e-3173
nervous system1.30e-3075
ecto-epithelium3.88e-3073
neurectoderm2.38e-2964
neural plate2.38e-2964
presumptive neural plate2.38e-2964
brain1.54e-2847
future brain1.54e-2847
regional part of brain1.04e-2746
pre-chordal neural plate1.06e-2449
anterior neural tube2.02e-2440
regional part of forebrain1.09e-2339
forebrain1.09e-2339
future forebrain1.09e-2339
gray matter4.72e-2334
brain grey matter7.45e-2029
regional part of telencephalon7.45e-2029
telencephalon7.45e-2029
structure with developmental contribution from neural crest1.10e-1792
cerebral cortex6.71e-1521
cerebral hemisphere6.71e-1521
pallium6.71e-1521
regional part of cerebral cortex3.97e-1317
occipital lobe3.32e-0910
visual cortex3.32e-0910
neocortex3.32e-0910
posterior neural tube1.04e-0712
chordal neural plate1.04e-0712
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