Personal tools

FFCP PHASE1:Mm9::chr19:46380054..46380065,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=231
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=35bp_to_uc008hss.1_5end
|association_with_transcript=35bp_to_uc008hss.1_5end
|cluster_id=chr19:46380054..46380065,-
|description=CAGE_peak_2_at_uc008hss.1_5end
|description=CAGE_peak_2_at_uc008hss.1_5end
|id=chr19:46380054..46380065,-
|id=chr19:46380054..46380065,-
|ontology_enrichment_celltype=CL:0000063!9.70e-16!66;CL:0000988!6.35e-11!32;CL:0002032!6.35e-11!32;CL:0000037!6.35e-11!32;CL:0000566!6.35e-11!32;CL:0000837!6.35e-11!32;CL:0002320!5.73e-09!46;CL:0000134!5.73e-09!46;CL:0000838!1.81e-08!12;CL:0002031!2.68e-08!25;CL:0000738!7.48e-08!17;CL:0002087!7.48e-08!17;CL:0000084!8.43e-08!11;CL:0000827!8.43e-08!11;CL:0000542!2.57e-07!13;CL:0000051!2.57e-07!13;CL:0000791!3.04e-07!9;CL:0000789!3.04e-07!9;CL:0002420!3.04e-07!9;CL:0002419!3.04e-07!9;CL:0000790!3.04e-07!9;CL:0000144!6.20e-07!121;CL:0000012!6.20e-07!121
|ontology_enrichment_celltype_v019_2=CL:0000988,5.97e-17,32;CL:0002032,5.97e-17,32;CL:0000037,5.97e-17,32;CL:0000837,5.97e-17,32;CL:0002320,5.33e-15,46;CL:0000134,5.33e-15,46;CL:0000791,1.17e-14,9;CL:0000789,1.17e-14,9;CL:0002420,1.17e-14,9;CL:0002419,1.17e-14,9;CL:0000790,1.17e-14,9;CL:0000838,1.97e-13,12;CL:0000738,3.78e-13,17;CL:0002087,3.78e-13,17;CL:0000624,9.24e-13,8;CL:0000542,3.01e-12,13;CL:0000051,3.01e-12,13;CL:0000219,5.52e-12,54;CL:0000084,1.06e-11,11;CL:0000827,1.06e-11,11;CL:0002031,2.75e-11,25;CL:0000893,3.36e-09,6;CL:0002489,3.36e-09,6;CL:0000898,3.36e-09,6;CL:0000809,3.36e-09,6;CL:0000810,3.36e-09,6;CL:0000895,3.36e-09,6;CL:0000808,3.36e-09,6;CL:0000894,3.36e-09,6;CL:0000806,3.36e-09,6;CL:0000807,3.36e-09,6;CL:0000805,3.36e-09,6;CL:0002425,3.36e-09,6;CL:0002436,3.36e-09,6;CL:0002427,3.36e-09,6;CL:0002428,3.36e-09,6;CL:0002429,3.36e-09,6;CL:0002433,3.36e-09,6;CL:0002431,3.36e-09,6;CL:0002432,3.36e-09,6;CL:0000239,8.45e-09,6;CL:0000677,8.45e-09,6;CL:0000584,8.45e-09,6;CL:0000034,3.16e-08,97;CL:0002563,1.14e-07,9;CL:0002251,1.14e-07,9;CL:0000066,1.30e-07,25;CL:0000075,1.79e-07,7;CL:0000473,6.82e-07,7;CL:0000049,7.11e-07,19
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!4.24e-13!48;UBERON:0002390!1.35e-11!45;UBERON:0003061!1.35e-11!45;UBERON:0003408!1.12e-09!24;UBERON:0000072!4.80e-09!27;UBERON:0002370!4.87e-09!23;UBERON:0000974!4.87e-09!23;UBERON:0004807!4.87e-09!23;UBERON:0005058!4.87e-09!23;UBERON:0003351!4.87e-09!23;UBERON:0009113!4.87e-09!23;UBERON:0003295!4.87e-09!23;UBERON:0009722!4.87e-09!23;UBERON:0005562!4.87e-09!23;UBERON:0007690!4.87e-09!23;UBERON:0002384!5.73e-09!46;UBERON:0006562!3.08e-08!24;UBERON:0001557!3.08e-08!24;UBERON:0001042!3.08e-08!24;UBERON:0008814!3.08e-08!24;UBERON:0009145!3.08e-08!24;UBERON:0004177!1.08e-07!29;UBERON:0000344!2.21e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.33e-15,46;UBERON:0002193,2.05e-11,48;UBERON:0002405,2.05e-11,48;UBERON:0000344,3.60e-09,15;UBERON:0002390,1.01e-08,45;UBERON:0003061,1.01e-08,45;UBERON:0003350,1.14e-07,9;UBERON:0004808,1.14e-07,9;UBERON:0001277,1.14e-07,9;UBERON:0001242,8.74e-07,13;UBERON:0001262,8.74e-07,13;UBERON:0004786,8.74e-07,13
|phase1_expression=0.640595388419176,3.83872948403297,5.91499011206397,1.51232105653415,0.500895729946347,2.51818907867835,2.10251376535973,6.97265946584512,6.05391505252167,4.21316147379588,1.36974374580404,0.717949430958028,3.25281386869291,4.19617931611188,0.333109761815663,0.404950534779652,0,1.57731082679119,1.09691546884591,0.84877930359606,0.0850432901510698,0.496454756004426,0.783599367416806,1.11994695955385,1.60586496747019,1.72269589234506,2.58457197695445,1.72376986148711,0.190023419456374,0.252030129759931,1.99557459589774,0.635030673459631,0,0,0.577703239502549,0.332469290716985,1.02084678131185,1.67412652294763,0.7813353445238,0,4.70585190424811,1.36609096991689,0.971020706062307,0.377690453926732,0.608261587317087,0.367093504323363,0,0,0,0,0.139986421625363,0,2.85230430298152,1.45072428402269,3.36093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,0,1.7997994345628,0,2.1314403448383,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,3.47837386442013,0,0,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.323533699894818,0.662524555381181,0,0,0,0,0.766371165625774,1.67741174308288,4.19931911695385,2.03312363316904,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,2.1066395619397,2.57347907114715,0.852490498186778,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.190225626112559,0,0.658795818896044,0,0.198956472041151,0,0,0.432276099749388,0.597423819763102,0.569003702859245,0,0,0,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,2.17562273527484,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0.388076051348264,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,2.37969801991397,4.19854356970974,4.00779924032829,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,3.10669656543463,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.948033361884535,1.21635129174099,1.1298205288131,0.909445760844565,0.716106782669926,1.19208812868759,0.360586348559907,0.590758108698309,0.908698049533329,0.838274873204998,0.504130925684203,0.877120926657772,0.481059208201647,0.584384510907845,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0,0,0.220591419119515,0
|phase1_expression=0.640595388419176,3.83872948403297,5.91499011206397,1.51232105653415,0.500895729946347,2.51818907867835,2.10251376535973,6.97265946584512,6.05391505252167,4.21316147379588,1.36974374580404,0.717949430958028,3.25281386869291,4.19617931611188,0.333109761815663,0.404950534779652,0,1.57731082679119,1.09691546884591,0.84877930359606,0.0850432901510698,0.496454756004426,0.783599367416806,1.11994695955385,1.60586496747019,1.72269589234506,2.58457197695445,1.72376986148711,0.190023419456374,0.252030129759931,1.99557459589774,0.635030673459631,0,0,0.577703239502549,0.332469290716985,1.02084678131185,1.67412652294763,0.7813353445238,0,4.70585190424811,1.36609096991689,0.971020706062307,0.377690453926732,0.608261587317087,0.367093504323363,0,0,0,0,0.139986421625363,0,2.85230430298152,1.45072428402269,3.36093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,0,1.7997994345628,0,2.1314403448383,1.19840044207362,0.768436610643109,0.103689612308478,0.135005938331691,0.420649922702764,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,3.47837386442013,0,0,0.539703191637817,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0.506719730950197,0.505524445014783,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0.323533699894818,0.662524555381181,0,0,0,0,0.766371165625774,1.67741174308288,4.19931911695385,2.03312363316904,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,2.1066395619397,2.57347907114715,0.852490498186778,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.243206428637567,0.146199987425332,0,0,0,0,0.660837565967596,0,0,0,0.257734922644187,0.201683524623343,0.667134131534611,0.190225626112559,0,0.658795818896044,0,0.198956472041151,0,0,0.432276099749388,0.597423819763102,0.569003702859245,0,0,0,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0.241177159752417,0.763877555344259,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.172684981865896,0,0,2.17562273527484,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0.404810701674894,0,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0.388076051348264,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,2.37969801991397,4.19854356970974,4.00779924032829,0,0.316335993581135,0.406638934253697,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.330613822901344,0.26175594198403,0.259229946583586,3.10669656543463,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0.948033361884535,1.21635129174099,1.1298205288131,0.909445760844565,0.716106782669926,1.19208812868759,0.360586348559907,0.590758108698309,0.908698049533329,0.838274873204998,0.504130925684203,0.877120926657772,0.481059208201647,0.584384510907845,0,0.221985953374065,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.341467211508268,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0,0.685738504770831,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0,0,0.220591419119515,0
|short_description=p2@uc008hss.1
|short_description=p2@uc008hss.1
}}
}}

Latest revision as of 05:24, 4 August 2015

Short description:p2@uc008hss.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_uc008hss.1_5end
Coexpression cluster:MCL_coexpression_mm9:231
Association with transcript: 35bp_to_uc008hss.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@uc008hss.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell5.97e-1732
hematopoietic oligopotent progenitor cell5.97e-1732
hematopoietic stem cell5.97e-1732
hematopoietic multipotent progenitor cell5.97e-1732
connective tissue cell5.33e-1546
mesenchymal cell5.33e-1546
mature alpha-beta T cell1.17e-149
alpha-beta T cell1.17e-149
immature T cell1.17e-149
mature T cell1.17e-149
immature alpha-beta T cell1.17e-149
lymphoid lineage restricted progenitor cell1.97e-1312
leukocyte3.78e-1317
nongranular leukocyte3.78e-1317
CD4-positive, alpha-beta T cell9.24e-138
lymphocyte3.01e-1213
common lymphoid progenitor3.01e-1213
motile cell5.52e-1254
T cell1.06e-1111
pro-T cell1.06e-1111
hematopoietic lineage restricted progenitor cell2.75e-1125
thymocyte3.36e-096
double negative thymocyte3.36e-096
naive T cell3.36e-096
double-positive, alpha-beta thymocyte3.36e-096
CD4-positive, alpha-beta thymocyte3.36e-096
naive thymus-derived CD4-positive, alpha-beta T cell3.36e-096
DN4 thymocyte3.36e-096
DN1 thymic pro-T cell3.36e-096
DN2 thymocyte3.36e-096
DN3 thymocyte3.36e-096
immature single positive thymocyte3.36e-096
early T lineage precursor3.36e-096
mature CD4 single-positive thymocyte3.36e-096
resting double-positive thymocyte3.36e-096
double-positive blast3.36e-096
CD69-positive double-positive thymocyte3.36e-096
CD69-positive, CD4-positive single-positive thymocyte3.36e-096
CD4-positive, CD8-intermediate double-positive thymocyte3.36e-096
CD24-positive, CD4 single-positive thymocyte3.36e-096
brush border epithelial cell8.45e-096
gut absorptive cell8.45e-096
enterocyte8.45e-096
stem cell3.16e-0897
intestinal epithelial cell1.14e-079
epithelial cell of alimentary canal1.14e-079
epithelial cell1.30e-0725
columnar/cuboidal epithelial cell1.79e-077
defensive cell6.82e-077
common myeloid progenitor7.11e-0719

Uber anatomy
Ontology termp-valuen
connective tissue5.33e-1546
hemolymphoid system2.05e-1148
immune system2.05e-1148
mucosa3.60e-0915
hematopoietic system1.01e-0845
blood island1.01e-0845
epithelium of mucosa1.14e-079
gastrointestinal system epithelium1.14e-079
intestinal epithelium1.14e-079
intestinal mucosa8.74e-0713
wall of intestine8.74e-0713
gastrointestinal system mucosa8.74e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:46380054..46380065,-&oldid=3741151"