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FFCP PHASE1:Mm9::chr16:90935047..90935102,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68001
|EntrezGene=68001
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8BL95,Q9CU27
|UniProt=Q8BL95,Q9CU27
|association_with_transcript=0bp_to_ENSMUST00000023694,ENSMUST00000131583,NM_026502,uc007zwt.2,uc007zwu.2_5end
|association_with_transcript=0bp_to_ENSMUST00000023694,ENSMUST00000131583,NM_026502,uc007zwt.2,uc007zwu.2_5end
|cluster_id=chr16:90935047..90935102,-
|description=CAGE_peak_1_at_1110004E09Rik_5end
|description=CAGE_peak_1_at_1110004E09Rik_5end
|id=chr16:90935047..90935102,-
|id=chr16:90935047..90935102,-
|ontology_enrichment_celltype=CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!5.87e-07!43
|ontology_enrichment_celltype=CL:0000117!1.23e-08!23;CL:0000337!1.23e-08!23;CL:0000221!3.36e-07!44;CL:0000133!3.36e-07!44;CL:0002319!5.87e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-08,23;CL:0000337,1.23e-08,23;CL:0000221,3.36e-07,44;CL:0000133,3.36e-07,44;CL:0002319,5.87e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.42e-16!50;UBERON:0006238!1.42e-16!50;UBERON:0002616!1.67e-16!49;UBERON:0001049!1.71e-16!52;UBERON:0005068!1.71e-16!52;UBERON:0006241!1.71e-16!52;UBERON:0007135!1.71e-16!52;UBERON:0001017!1.56e-15!73;UBERON:0005743!1.56e-15!73;UBERON:0000073!2.57e-15!75;UBERON:0001016!2.57e-15!75;UBERON:0002020!2.75e-15!34;UBERON:0000033!1.16e-14!63;UBERON:0002791!1.82e-14!29;UBERON:0003528!1.82e-14!29;UBERON:0001893!1.82e-14!29;UBERON:0003080!2.45e-13!40;UBERON:0002780!4.72e-13!39;UBERON:0001890!4.72e-13!39;UBERON:0006240!4.72e-13!39;UBERON:0007811!1.22e-11!86;UBERON:0004111!2.35e-11!122;UBERON:0000025!6.54e-11!114;UBERON:0000956!8.39e-11!21;UBERON:0001869!8.39e-11!21;UBERON:0000203!8.39e-11!21;UBERON:0004121!8.71e-11!102;UBERON:0000924!8.71e-11!102;UBERON:0006601!8.71e-11!102;UBERON:0003056!1.10e-10!49;UBERON:0002619!7.68e-10!17;UBERON:0002346!1.19e-09!71;UBERON:0003075!1.19e-09!71;UBERON:0007284!1.19e-09!71;UBERON:0000477!2.25e-08!154;UBERON:0000153!2.57e-08!94;UBERON:0000062!4.17e-08!269;UBERON:0000064!6.55e-07!99;UBERON:0002021!6.89e-07!10;UBERON:0000411!6.89e-07!10;UBERON:0001950!6.89e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.33e-17,54;UBERON:0001049,1.71e-16,52;UBERON:0005068,1.71e-16,52;UBERON:0006241,1.71e-16,52;UBERON:0007135,1.71e-16,52;UBERON:0001017,1.56e-15,73;UBERON:0000955,2.41e-15,47;UBERON:0006238,2.41e-15,47;UBERON:0001016,2.57e-15,75;UBERON:0002020,2.75e-15,34;UBERON:0002616,2.83e-15,46;UBERON:0003528,1.82e-14,29;UBERON:0002791,1.82e-14,29;UBERON:0001893,1.82e-14,29;UBERON:0003080,2.45e-13,40;UBERON:0002780,4.72e-13,39;UBERON:0001890,4.72e-13,39;UBERON:0006240,4.72e-13,39;UBERON:0004121,8.90e-13,95;UBERON:0000924,8.90e-13,95;UBERON:0006601,8.90e-13,95;UBERON:0010371,4.09e-12,73;UBERON:0002346,4.62e-12,64;UBERON:0003075,4.62e-12,64;UBERON:0007284,4.62e-12,64;UBERON:0010314,5.29e-12,92;UBERON:0004111,2.35e-11,122;UBERON:0000025,6.54e-11,114;UBERON:0000956,8.39e-11,21;UBERON:0001869,8.39e-11,21;UBERON:0000203,8.39e-11,21;UBERON:0003056,1.10e-10,49;UBERON:0002619,7.68e-10,17;UBERON:0000483,5.80e-07,174;UBERON:0002021,6.89e-07,10;UBERON:0000411,6.89e-07,10;UBERON:0001950,6.89e-07,10;UBERON:0000119,7.07e-07,176
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276109,18.1448972580626,16.0997987931141,12.4466661335321,17.1277719908722,12.9765925488777,17.799404054914,16.4611016080577,16.1548221402601,291.992942238411,9.71857549285862,12.7403037651965,11.4726201122988,12.7868225242954,15.0370951686793,11.2662949099924,15.3641174115861,19.5038380631822,134.320771179259,168.497553660851,13.5884781870117,21.0834223901771,19.3096599469875,23.6455897819587,14.6801890447335,16.0931897372825,19.351467372715,18.7565699511713,20.496189339474,19.8137697303,17.8462347692208,17.7373342946349,16.8370722870577,16.0121355988749,22.2195775942907,29.9681037054987,36.1546842136187,25.8542309200681,14.2960299583821,12.9500908061316,18.681465675261,14.3626813982974,16.551879433167,37.2736216127264,28.540164663445,38.3839994004396,32.3083982806133,30.1436308699083,42.3020582538232,46.5765525159946,42.3301931030767,42.5953864445152,38.3142630696347,15.5681021376265,9.17757208822371,15.8782253351345,13.6139761558245,20.5420899375423,17.4651333027513,16.6685045851211,14.8345241212004,19.2551525755089,14.4037410705365,15.2087579934144,14.5242282867279,15.7317732549402,15.3660365771686,15.2203992732375,12.859929664643,18.8891451290114,15.046919196169,16.4834360321323,21.9326391000252,20.5721551431249,19.3448628713678,19.7902037656276,16.5694914960855,15.1516102468682,18.3613699124938,17.3781574229134,17.3626009548976,20.0990088491875,22.4456908663095,18.6256978454953,19.1098695808593,19.6430900721451,19.2121683070598,12.346023102793,15.4882558321526,13.3341016813883,11.8179079726564,10.7121465958552,11.2501623750953,19.245030356495
|phase1_expression=39.7169140819889,8.37540978334467,7.27998783023258,10.5862473957391,5.50985302940982,20.4812711732506,18.4553986070465,12.7832090207161,7.88416844049334,10.5329036844897,22.0871179010901,24.4900528115683,14.5520620441525,18.4457049104085,21.9852442798337,17.2103977281352,14.6907994406911,10.4102514568218,10.5578113876419,13.1560792057389,54.3426624065336,15.2908064849363,16.9779862940308,14.7193028969934,17.6645146421721,8.03924749761028,12.0613358924541,13.3592164265251,11.9714754257516,15.1218077855958,19.0688239163562,13.3356441426523,12.3012957516914,0,26.8632006368685,31.750817263472,24.5003227514843,2.92972141515835,3.906676722619,3.14114246384279,1.17646297606203,1.36609096991689,2.91306211818692,7.30201544258348,7.09638518536602,8.62669735159903,29.7308710852255,64.3174211322317,44.8159812778323,48.9963345667194,43.3957907038624,71.8762821824858,7.3824346665404,12.3311564141929,15.4603147605533,14.663787854049,17.4785398362642,14.4388185837684,29.9428362072205,33.8554226734101,27.8885817542719,17.2810711355257,15.1180115338894,17.5480444869873,25.7105254267413,15.6305625288142,45.2396166882791,96.8230129410317,22.0858874217057,24.8410926530311,25.6596452848686,30.8503063156108,25.8416192913388,22.7832886539815,25.3032043488144,28.4957823849107,24.2254938198655,34.3478939449155,28.1099955858926,26.3772575460388,30.8313358940121,26.045668527838,31.547678887156,43.895483582471,30.559649555362,18.8562294703147,19.6472919502762,24.4183274031144,16.1296791799682,18.5150322261625,22.3195656300292,30.1148356943485,19.039197343817,28.0645659651665,20.7928453583254,36.2901778548842,26.9653286652964,13.1231348385104,18.9643783360094,19.0803370235584,24.7884418806958,14.115912515575,17.8363667794652,7.11066703153331,47.6280290224671,43.0711771307668,45.4972000513305,26.4906600948219,9.58070169494535,14.6957717674177,13.1848848342263,13.3964810457342,11.992005857315,12.2085338847624,13.1699351991989,26.1386509965725,11.6181634835156,14.6045350489111,6.19227386364912,17.3090529443728,16.3422723660691,17.455509112868,22.3670113461747,26.9358333250623,20.1068838540917,12.7728527604296,19.7694955434768,29.395233818677,18.9334638338866,25.1648274200102,31.5675415944852,29.1518096901845,29.0286614721102,38.1016031422192,28.4669621046597,27.2565321953833,12.7299204812895,11.3210343255185,21.9868799837297,28.409650544674,11.0602376518298,11.9549094305406,12.2442248267637,15.5225962370787,16.9410882886806,15.1174189936123,18.9277483610652,25.3529303324235,16.383167462896,8.13156144721623,9.67731182901719,15.1245055375027,11.1218899690239,9.4028084960985,13.7874031393322,13.733364410476,33.7062329910353,26.7641823399304,19.0389544595047,15.3273071676271,16.1822981386956,20.5270750065557,11.3637473080901,23.2181793461937,21.9059300300077,19.7653853037847,23.8763327245661,23.5865991581682,23.3674986877142,23.4759473633106,24.4827804828484,26.1697977491345,27.2242142960903,30.1964442210836,31.7537822331832,31.3859067756818,12.2254949704005,15.8670339998127,13.8637362847902,15.3276203427889,14.6908905907186,14.9245808221273,14.0098167622268,11.223311940641,12.8122846617018,11.8583247401288,13.5721012752146,10.544693018181,11.8928093142663,10.7858329038507,17.0749059401008,15.3338780405863,12.7077493638565,14.2810640762161,13.5249282807697,13.2373363099454,13.5766741017338,13.3959415990508,15.7458977439401,21.8463019009811,22.9218142648407,27.7643618824051,26.0878311836691,16.017130148745,14.545365638377,14.6160373050155,11.7658870405332,10.6117950291063,11.7127891819453,16.1109836972454,11.6737363278025,17.0228076176611,15.814502718009,10.7920874823866,13.4176199439261,24.2475722829227,22.9628689308048,28.946611281802,27.7129785249907,14.0223644710159,14.9927778326664,12.3913912615887,16.6630076284836,18.9282070909252,19.5195785526531,18.3425628986331,16.3940549870439,14.8381342064679,12.437471955284,21.1383675983302,20.8948828057734,21.6973587872267,10.5553898757491,3.26343410291226,17.2117495556663,15.7283945393698,24.4036896781444,21.5669503329654,15.2459499200308,30.8014531189335,11.6738041184015,12.4940398174924,13.3562506594335,13.6212214832955,9.80314165962534,13.8707500086528,8.09621403349789,11.3979784585412,8.30104333687699,19.921921618152,16.4650498841592,17.450429159391,12.8680697889325,16.8269525431986,23.8941249011933,16.7518638946937,19.0463840887793,17.1630622577867,15.651000322681,16.2940628410282,16.5394107627662,17.0860852854428,15.6858846489277,19.2782422340848,26.3546521437497,30.9406629744561,24.8520912200265,15.1251318986301,18.8863678322822,16.7182887324642,15.9606210278046,13.7343989553594,19.9104314928566,17.0500371504176,6.57080782578389,9.53244318887191,20.7296694171664,28.6902080118175,11.3025098687134,15.9829251059613,18.7414580084924,18.5479216711919,14.2825609948627,21.3239097312086,11.619219894254,12.3832120777933,14.2599786074678,15.6345819313894,12.9859516334974,14.6418030852174,13.2583175395207,13.0154850661002,10.3649980353318,26.7307773044232,9.96458379780576,12.1991680276109,18.1448972580626,16.0997987931141,12.4466661335321,17.1277719908722,12.9765925488777,17.799404054914,16.4611016080577,16.1548221402601,291.992942238411,9.71857549285862,12.7403037651965,11.4726201122988,12.7868225242954,15.0370951686793,11.2662949099924,15.3641174115861,19.5038380631822,134.320771179259,168.497553660851,13.5884781870117,21.0834223901771,19.3096599469875,23.6455897819587,14.6801890447335,16.0931897372825,19.351467372715,18.7565699511713,20.496189339474,19.8137697303,17.8462347692208,17.7373342946349,16.8370722870577,16.0121355988749,22.2195775942907,29.9681037054987,36.1546842136187,25.8542309200681,14.2960299583821,12.9500908061316,18.681465675261,14.3626813982974,16.551879433167,37.2736216127264,28.540164663445,38.3839994004396,32.3083982806133,30.1436308699083,42.3020582538232,46.5765525159946,42.3301931030767,42.5953864445152,38.3142630696347,15.5681021376265,9.17757208822371,15.8782253351345,13.6139761558245,20.5420899375423,17.4651333027513,16.6685045851211,14.8345241212004,19.2551525755089,14.4037410705365,15.2087579934144,14.5242282867279,15.7317732549402,15.3660365771686,15.2203992732375,12.859929664643,18.8891451290114,15.046919196169,16.4834360321323,21.9326391000252,20.5721551431249,19.3448628713678,19.7902037656276,16.5694914960855,15.1516102468682,18.3613699124938,17.3781574229134,17.3626009548976,20.0990088491875,22.4456908663095,18.6256978454953,19.1098695808593,19.6430900721451,19.2121683070598,12.346023102793,15.4882558321526,13.3341016813883,11.8179079726564,10.7121465958552,11.2501623750953,19.245030356495
|short_description=p1@1110004E09Rik
|short_description=p1@1110004E09Rik
}}
}}

Latest revision as of 20:08, 25 September 2015

Short description:p1@1110004E09Rik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_1110004E09Rik_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000023694, ENSMUST00000131583, NM_026502, uc007zwt.2, uc007zwu.2_5end
EntrezGene:1110004E09Rik
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@1110004E09Rik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.59
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.46
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.49
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A354.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.98
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I112.06
GP2+ M cell, pool3.CNhs13240.11847-124I213.36
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C115.12
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.75
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F724.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B729.73
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C264.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B844.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C349.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C443.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C471.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C329.94
Mouse Granule cells, donor2.CNhs12357.11731-123E333.86
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D215.63
Mouse Microglia, donor1.CNhs12629.11718-123C845.24
Mouse Microglia, donor2.CNhs12634.11736-123E896.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.35
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E543.90
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I630.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.42
Mouse Schwann, donor1.CNhs12507.11728-123D916.13
Mouse Schwann, donor2.CNhs12573.11746-123F918.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F730.11
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.06
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F636.29
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G624.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G147.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G243.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G345.50
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.49
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D714.70
adrenal gland, embryo E14.CNhs11038.406-44C513.18
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F512.21
adrenal gland, neonate N00.CNhs11191.1311-23C113.17
adrenal gland, neonate N25.CNhs11223.1377-27I326.14
amnion, adult pregnant day17.5.CNhs10488.583-22A811.62
aorta, adult.CNhs10498.46-23H114.60
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F517.31
bone (os femoris), neonate N16.CNhs11225.1525-43A616.34
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B226.94
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H712.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D129.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.93
corpora quadrigemina, adult.CNhs10501.16-22A425.16
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F129.15
cortex, adult.CNhs10473.12-14D529.03
cortex, neonate N30.CNhs11107.1392-42F238.10
diencephalon, adult.CNhs10482.20-12F228.47
diencephalon, neonate N30.CNhs11201.1388-42B227.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B221.99
eyeball, adult.CNhs10484.31-12G428.41
eyeball, embryo E12.CNhs11016.345-16C611.06
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C912.24
eyeball, embryo E17.CNhs11023.1261-18D415.52
eyeball, neonate N00.CNhs11207.633-15C616.94
eyeball, neonate N01.CNhs11140.1532-43E715.12
eyeball, neonate N02.CNhs11205.1551-44G818.93
eyeball, neonate N16.CNhs11188.777-19A225.35
forelimb, embryo E11.CNhs10596.335-25E216.38
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E29.68
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B513.79
gonad, embryo E13.CNhs11044.1564-45I613.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C833.71
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D226.76
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.04
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F516.18
heart, embryo E13.CNhs11013.376-3I920.53
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C823.22
heart, embryo E16.CNhs11021.457-17C621.91
heart, embryo E17.CNhs11025.479-18E519.77
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E323.59
heart, neonate N03.CNhs11221.1349-25I223.37
heart, neonate N10.CNhs11118.749-24G123.48
heart, neonate N16.CNhs11209.782-15G124.48
heart, neonate N20.CNhs11127.821-26I626.17
heart, neonate N25.CNhs11196.1351-25D327.22
heart, neonate N30.CNhs11202.1390-42D230.20
hippocampus, adult.CNhs10478.13-16E831.75
hippocampus, neonate N00.CNhs11228.627-43G131.39
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A315.87
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D515.33
intestine, embryo E15.CNhs10602.976-16D814.69
intestine, embryo E16.CNhs10585.463-22H414.92
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E911.86
intestine, neonate N06.CNhs11102.688-20B813.57
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E317.07
intestine, neonate N30.CNhs11131.1384-42G115.33
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F814.28
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I213.24
kidney, embryo E18.CNhs11001.1288-20C713.58
kidney, neonate N00.CNhs11214.646-21G713.40
kidney, neonate N10.CNhs11206.758-6D515.75
kidney, neonate N20.CNhs11113.832-19I121.85
kidney, neonate N25.CNhs11122.1353-25F322.92
kidney, neonate N30.CNhs11203.1385-42H127.76
liver, adult pregnant day01.CNhs10466.508-5B226.09
liver, embryo E12.CNhs10601.355-15F816.02
liver, embryo E13.CNhs10524.378-3H614.55
liver, embryo E14.CNhs10594.409-16E114.62
liver, embryo E15.CNhs10520.433-16D711.77
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G416.11
liver, neonate N00.CNhs11117.641-24F411.67
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A324.25
liver, neonate N25.CNhs11198.1368-26H122.96
liver, neonate N30.CNhs11106.1382-42D128.95
lung, adult.CNhs10474.28-22B127.71
lung, embryo E12.CNhs10522.354-16G214.02
lung, embryo E14.CNhs10604.404-26F814.99
lung, embryo E15.CNhs11020.432-17C512.39
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A618.93
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C618.34
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A314.84
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A421.14
lung, neonate N25.CNhs11119.1359-25C720.89
lung, neonate N30.CNhs11133.1394-42H221.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B617.21
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C224.40
medulla oblongata, neonate N30.CNhs11200.1396-42A321.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.36
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.62
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I716.47
ovary, embryo E18.CNhs11040.505-44H717.45
ovary, neonate N00.CNhs11217.1299-22I412.87
oviduct, adult pregnant day01.CNhs10500.988-6G616.83
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F416.75
pancreas, embryo E15.CNhs11042.1556-45F219.05
pancreas, embryo E16.CNhs11003.460-26E517.16
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H530.94
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E615.13
pituitary gland, embryo E13.CNhs11009.370-44C718.89
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B915.96
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F519.91
pituitary gland, neonate N00.CNhs11190.1308-22E917.05
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G39.53
prostate, adult.CNhs10470.859-1F820.73
skin, adult.CNhs10492.30-1C328.69
skin, neonate N00.CNhs11124.650-25G411.30
skin, neonate N03.CNhs11215.662-22H315.98
skin, neonate N06.CNhs11097.693-20I518.74
skin, neonate N10.CNhs11108.762-6C418.55
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C921.32
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C112.38
spleen, embryo E18.CNhs11011.1271-21F214.26
spleen, neonate N10.CNhs11116.752-24D115.63
spleen, neonate N20.CNhs11112.824-19H112.99
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.36
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E39.96
stomach, embryo E15.CNhs10603.1252-16G812.20
stomach, embryo E16.CNhs11022.459-17D418.14
stomach, embryo E17.CNhs11006.1035-18D516.10
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B817.13
stomach, neonate N07.CNhs11210.718-18A912.98
stomach, neonate N25.CNhs11104.1355-25E417.80
stomach, neonate N30.CNhs11134.1386-42I116.46
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G5291.99
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C512.74
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I512.79
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B711.27
testis, neonate N07.CNhs11222.726-26I415.36
testis, neonate N10.CNhs11204.763-44D919.50
testis, neonate N20.CNhs11110.839-18H3134.32
testis, neonate N30.CNhs11130.1391-42E2168.50
thymus, adult.CNhs10471.38-12B513.59
thymus, embryo E14.CNhs11041.402-44I421.08
thymus, embryo E15.CNhs11005.430-45I219.31
thymus, embryo E16.CNhs11002.456-26C523.65
thymus, embryo E17.CNhs10581.478-18C114.68
thymus, embryo E18.CNhs10595.1273-19G416.09
thymus, neonate N02.CNhs11181.1541-43F819.35
thymus, neonate N03.CNhs11137.2104-43C718.76
thymus, neonate N06.CNhs11197.681-26C420.50
thymus, neonate N07.CNhs11211.713-19D319.81
thymus, neonate N10.CNhs11194.748-24E417.85
thymus, neonate N20.CNhs11186.820-7A217.74
thymus, neonate N25.CNhs11125.1362-25G716.84
thymus, neonate N30.CNhs11132.1393-42G216.01
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F736.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.85
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F512.95
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D514.36
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D732.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.14
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A742.33
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A842.60
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I815.57
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B120.54
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.83
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.93
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.21
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B419.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.23e-0823
neuroblast (sensu Vertebrata)1.23e-0823
ectodermal cell3.36e-0744
neurectodermal cell3.36e-0744
neural cell5.87e-0743

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.33e-1754
neural tube1.71e-1652
neural rod1.71e-1652
future spinal cord1.71e-1652
neural keel1.71e-1652
central nervous system1.56e-1573
brain2.41e-1547
future brain2.41e-1547
nervous system2.57e-1575
gray matter2.75e-1534
regional part of brain2.83e-1546
brain grey matter1.82e-1429
regional part of telencephalon1.82e-1429
telencephalon1.82e-1429
anterior neural tube2.45e-1340
regional part of forebrain4.72e-1339
forebrain4.72e-1339
future forebrain4.72e-1339
ectoderm-derived structure8.90e-1395
ectoderm8.90e-1395
presumptive ectoderm8.90e-1395
ecto-epithelium4.09e-1273
neurectoderm4.62e-1264
neural plate4.62e-1264
presumptive neural plate4.62e-1264
structure with developmental contribution from neural crest5.29e-1292
anatomical conduit2.35e-11122
tube6.54e-11114
cerebral cortex8.39e-1121
cerebral hemisphere8.39e-1121
pallium8.39e-1121
pre-chordal neural plate1.10e-1049
regional part of cerebral cortex7.68e-1017
epithelium5.80e-07174
occipital lobe6.89e-0710
visual cortex6.89e-0710
neocortex6.89e-0710
cell layer7.07e-07176
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