FFCP PHASE1:Mm9::chr17:36005563..36005592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=374 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:36005563..36005592,+ | |||
|description=CAGE_peak_at_chr17:36005563..36005592,+ | |description=CAGE_peak_at_chr17:36005563..36005592,+ | ||
|id=chr17:36005563..36005592,+ | |id=chr17:36005563..36005592,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.48e-09!32;CL:0002032!4.48e-09!32;CL:0000037!4.48e-09!32;CL:0000566!4.48e-09!32;CL:0000837!4.48e-09!32;CL:0000034!2.86e-08!97;CL:0000838!4.75e-08!12;CL:0000084!2.12e-07!11;CL:0000827!2.12e-07!11;CL:0002031!3.44e-07!25;CL:0000542!3.82e-07!13;CL:0000051!3.82e-07!13;CL:0000219!4.30e-07!54;CL:0000738!8.06e-07!17;CL:0002087!8.06e-07!17;CL:0002320!8.18e-07!46;CL:0000134!8.18e-07!46 | |ontology_enrichment_celltype=CL:0000988!4.48e-09!32;CL:0002032!4.48e-09!32;CL:0000037!4.48e-09!32;CL:0000566!4.48e-09!32;CL:0000837!4.48e-09!32;CL:0000034!2.86e-08!97;CL:0000838!4.75e-08!12;CL:0000084!2.12e-07!11;CL:0000827!2.12e-07!11;CL:0002031!3.44e-07!25;CL:0000542!3.82e-07!13;CL:0000051!3.82e-07!13;CL:0000219!4.30e-07!54;CL:0000738!8.06e-07!17;CL:0002087!8.06e-07!17;CL:0002320!8.18e-07!46;CL:0000134!8.18e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.85e-15,32;CL:0002032,2.85e-15,32;CL:0000037,2.85e-15,32;CL:0000837,2.85e-15,32;CL:0000034,6.59e-13,97;CL:0002320,2.49e-12,46;CL:0000134,2.49e-12,46;CL:0002031,3.44e-12,25;CL:0000219,5.99e-12,54;CL:0000838,1.30e-11,12;CL:0000738,1.28e-10,17;CL:0002087,1.28e-10,17;CL:0000084,1.30e-10,11;CL:0000827,1.30e-10,11;CL:0000542,2.18e-10,13;CL:0000051,2.18e-10,13;CL:0000723,9.55e-10,91;CL:0000048,9.55e-10,91;CL:0000791,5.46e-09,9;CL:0000789,5.46e-09,9;CL:0002420,5.46e-09,9;CL:0002419,5.46e-09,9;CL:0000790,5.46e-09,9;CL:0000624,4.05e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.49e-16!48;UBERON:0002390!1.64e-14!45;UBERON:0003061!1.64e-14!45;UBERON:0003081!1.01e-12!88;UBERON:0004177!2.26e-10!29;UBERON:0003408!2.45e-08!24;UBERON:0002370!4.00e-08!23;UBERON:0000974!4.00e-08!23;UBERON:0004807!4.00e-08!23;UBERON:0005058!4.00e-08!23;UBERON:0003351!4.00e-08!23;UBERON:0009113!4.00e-08!23;UBERON:0003295!4.00e-08!23;UBERON:0009722!4.00e-08!23;UBERON:0005562!4.00e-08!23;UBERON:0007690!4.00e-08!23;UBERON:0002405!8.06e-08!70;UBERON:0002204!1.76e-07!32;UBERON:0006562!3.36e-07!24;UBERON:0001557!3.36e-07!24;UBERON:0001042!3.36e-07!24;UBERON:0008814!3.36e-07!24;UBERON:0009145!3.36e-07!24;UBERON:0002384!8.18e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.86e-22,48;UBERON:0002405,2.86e-22,48;UBERON:0002390,6.78e-20,45;UBERON:0003061,6.78e-20,45;UBERON:0004177,2.05e-15,29;UBERON:0005057,2.05e-15,29;UBERON:0000077,2.13e-13,35;UBERON:0003408,3.42e-13,24;UBERON:0002370,7.21e-13,23;UBERON:0000974,7.21e-13,23;UBERON:0004807,7.21e-13,23;UBERON:0005058,7.21e-13,23;UBERON:0003351,7.21e-13,23;UBERON:0009113,7.21e-13,23;UBERON:0003295,7.21e-13,23;UBERON:0009722,7.21e-13,23;UBERON:0005562,7.21e-13,23;UBERON:0007690,7.21e-13,23;UBERON:0002384,2.49e-12,46;UBERON:0006562,4.88e-12,24;UBERON:0001557,4.88e-12,24;UBERON:0001042,4.88e-12,24;UBERON:0008814,4.88e-12,24;UBERON:0009145,4.88e-12,24;UBERON:0003081,1.01e-11,87;UBERON:0000072,6.15e-10,27;UBERON:0002204,9.42e-09,32;UBERON:0001004,6.10e-08,42;UBERON:0000065,1.25e-07,41;UBERON:0000926,1.59e-07,120;UBERON:0004120,1.59e-07,120;UBERON:0006603,1.59e-07,120 | |||
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| ||
|short_description=p@chr17:36005563..36005592,+ | |short_description=p@chr17:36005563..36005592,+ | ||
}} | }} |
Latest revision as of 20:17, 4 August 2015
Short description: | p@chr17:36005563..36005592, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:36005563..36005592, + |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.85e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.85e-15 | 32 |
hematopoietic stem cell | 2.85e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.85e-15 | 32 |
stem cell | 6.59e-13 | 97 |
connective tissue cell | 2.49e-12 | 46 |
mesenchymal cell | 2.49e-12 | 46 |
hematopoietic lineage restricted progenitor cell | 3.44e-12 | 25 |
motile cell | 5.99e-12 | 54 |
lymphoid lineage restricted progenitor cell | 1.30e-11 | 12 |
leukocyte | 1.28e-10 | 17 |
nongranular leukocyte | 1.28e-10 | 17 |
T cell | 1.30e-10 | 11 |
pro-T cell | 1.30e-10 | 11 |
lymphocyte | 2.18e-10 | 13 |
common lymphoid progenitor | 2.18e-10 | 13 |
somatic stem cell | 9.55e-10 | 91 |
multi fate stem cell | 9.55e-10 | 91 |
mature alpha-beta T cell | 5.46e-09 | 9 |
alpha-beta T cell | 5.46e-09 | 9 |
immature T cell | 5.46e-09 | 9 |
mature T cell | 5.46e-09 | 9 |
immature alpha-beta T cell | 5.46e-09 | 9 |
CD4-positive, alpha-beta T cell | 4.05e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.86e-22 | 48 |
immune system | 2.86e-22 | 48 |
hematopoietic system | 6.78e-20 | 45 |
blood island | 6.78e-20 | 45 |
hemopoietic organ | 2.05e-15 | 29 |
immune organ | 2.05e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 2.13e-13 | 35 |
gland of gut | 3.42e-13 | 24 |
thymus | 7.21e-13 | 23 |
neck | 7.21e-13 | 23 |
respiratory system epithelium | 7.21e-13 | 23 |
hemolymphoid system gland | 7.21e-13 | 23 |
pharyngeal epithelium | 7.21e-13 | 23 |
thymic region | 7.21e-13 | 23 |
pharyngeal gland | 7.21e-13 | 23 |
entire pharyngeal arch endoderm | 7.21e-13 | 23 |
thymus primordium | 7.21e-13 | 23 |
early pharyngeal endoderm | 7.21e-13 | 23 |
connective tissue | 2.49e-12 | 46 |
pharynx | 4.88e-12 | 24 |
upper respiratory tract | 4.88e-12 | 24 |
chordate pharynx | 4.88e-12 | 24 |
pharyngeal arch system | 4.88e-12 | 24 |
pharyngeal region of foregut | 4.88e-12 | 24 |
lateral plate mesoderm | 1.01e-11 | 87 |
segment of respiratory tract | 6.15e-10 | 27 |
musculoskeletal system | 9.42e-09 | 32 |
respiratory system | 6.10e-08 | 42 |
respiratory tract | 1.25e-07 | 41 |
mesoderm | 1.59e-07 | 120 |
mesoderm-derived structure | 1.59e-07 | 120 |
presumptive mesoderm | 1.59e-07 | 120 |