FFCP PHASE1:Hg19::chr12:133405658..133405693,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2802 | |EntrezGene=2802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4426 | |HGNC=4426 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-208bp_to_uc001ulb.2_5end | |association_with_transcript=-208bp_to_uc001ulb.2_5end | ||
|cluster_id=chr12:133405658..133405693,- | |||
|description=CAGE_peak_2_at_GOLGA3_5end | |description=CAGE_peak_2_at_GOLGA3_5end | ||
|id=chr12:133405658..133405693,- | |id=chr12:133405658..133405693,- | ||
|ontology_enrichment_celltype=CL:0000115!1.03e-13!35;CL:0002139!1.45e-13!24;CL:0002078!2.39e-13!44;CL:0000222!1.71e-11!119;CL:0000071!9.70e-11!18;CL:0002546!9.70e-11!18;CL:0000213!1.19e-10!57;CL:0000215!1.19e-10!57 | |ontology_enrichment_celltype=CL:0000115!1.03e-13!35;CL:0002139!1.45e-13!24;CL:0002078!2.39e-13!44;CL:0000222!1.71e-11!119;CL:0000071!9.70e-11!18;CL:0002546!9.70e-11!18;CL:0000213!1.19e-10!57;CL:0000215!1.19e-10!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.51e-14;24!CL:0000115;3.51e-12;36!CL:0000071;3.10e-11;18!CL:0002078;8.20e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,9.06e-15,36;CL:0002139,1.34e-14,24;CL:0002078,7.70e-14,45;CL:0000222,1.39e-11,121;CL:0000071,1.58e-11,18;CL:0002546,1.58e-11,18;CL:0000213,4.77e-10,58;CL:0000215,4.77e-10,58;CL:1000413,7.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.10e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.45e-12!79;UBERON:0007798!1.45e-12!79;UBERON:0000055!3.97e-12!69;UBERON:0001981!9.95e-12!60;UBERON:0007500!9.95e-12!60;UBERON:0004537!9.95e-12!60;UBERON:0006965!9.95e-12!60;UBERON:0004872!2.54e-11!84;UBERON:0001986!9.70e-11!18;UBERON:0004638!9.70e-11!18;UBERON:0004852!9.70e-11!18;UBERON:0000487!2.96e-10!22;UBERON:0004535!2.17e-09!110;UBERON:0003914!3.30e-09!118;UBERON:0001009!3.95e-09!113;UBERON:0006914!9.59e-09!25;UBERON:0003081!8.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.10e-11;18!UBERON:0001986;3.10e-11;18!UBERON:0004852;3.10e-11;18!UBERON:0000487;6.10e-11;22!UBERON:0006914;5.87e-09;25!UBERON:0000055;2.01e-07;65!UBERON:0007500;3.57e-07;56!UBERON:0001981;3.57e-07;56!UBERON:0004537;3.57e-07;56!UBERON:0000490;8.35e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.62e-13,78;UBERON:0007798,2.62e-13,78;UBERON:0000055,5.51e-13,68;UBERON:0007500,4.78e-12,59;UBERON:0001981,4.78e-12,59;UBERON:0004537,4.78e-12,59;UBERON:0006965,4.78e-12,59;UBERON:0004872,6.40e-12,83;UBERON:0004638,1.58e-11,18;UBERON:0001986,1.58e-11,18;UBERON:0004852,1.58e-11,18;UBERON:0000487,2.14e-11,22;UBERON:0004535,9.58e-11,109;UBERON:0000926,1.38e-10,315;UBERON:0004120,1.38e-10,315;UBERON:0006603,1.38e-10,315;UBERON:0003914,1.63e-10,117;UBERON:0001009,1.95e-10,112;UBERON:0003081,1.52e-09,203;UBERON:0006914,4.28e-09,25;UBERON:0003915,7.10e-07,9;UBERON:0004700,7.10e-07,9;UBERON:0001917,7.10e-07,9;UBERON:0001637,8.93e-07,42;UBERON:0003509,8.93e-07,42;UBERON:0004572,8.93e-07,42 | |||
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| ||
|short_description=p2@GOLGA3 | |short_description=p2@GOLGA3 | ||
}} | }} |
Latest revision as of 11:39, 17 September 2015
Short description: | p2@GOLGA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GOLGA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_uc001ulb.2_5end |
EntrezGene: | GOLGA3 |
HGNC: | 4426 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 9.06e-15 | 36 |
endothelial cell of vascular tree | 1.34e-14 | 24 |
meso-epithelial cell | 7.70e-14 | 45 |
mesodermal cell | 1.39e-11 | 121 |
blood vessel endothelial cell | 1.58e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.58e-11 | 18 |
lining cell | 4.77e-10 | 58 |
barrier cell | 4.77e-10 | 58 |
endothelial cell of artery | 7.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.62e-13 | 78 |
vascular system | 2.62e-13 | 78 |
vessel | 5.51e-13 | 68 |
epithelial tube open at both ends | 4.78e-12 | 59 |
blood vessel | 4.78e-12 | 59 |
blood vasculature | 4.78e-12 | 59 |
vascular cord | 4.78e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 6.40e-12 | 83 |
blood vessel endothelium | 1.58e-11 | 18 |
endothelium | 1.58e-11 | 18 |
cardiovascular system endothelium | 1.58e-11 | 18 |
simple squamous epithelium | 2.14e-11 | 22 |
cardiovascular system | 9.58e-11 | 109 |
mesoderm | 1.38e-10 | 315 |
mesoderm-derived structure | 1.38e-10 | 315 |
presumptive mesoderm | 1.38e-10 | 315 |
epithelial tube | 1.63e-10 | 117 |
circulatory system | 1.95e-10 | 112 |
lateral plate mesoderm | 1.52e-09 | 203 |
squamous epithelium | 4.28e-09 | 25 |
endothelial tube | 7.10e-07 | 9 |
arterial system endothelium | 7.10e-07 | 9 |
endothelium of artery | 7.10e-07 | 9 |
artery | 8.93e-07 | 42 |
arterial blood vessel | 8.93e-07 | 42 |
arterial system | 8.93e-07 | 42 |