FFCP PHASE1:Hg19::chr12:57735499..57735520,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCG9 | |UniProt=B5MCG9 | ||
|association_with_transcript=-234bp_to_ENST00000403821_5end | |association_with_transcript=-234bp_to_ENST00000403821_5end | ||
|cluster_id=chr12:57735499..57735520,- | |||
|coexpression_cluster_id=C257 | |||
|description=CAGE_peak_10_at_R3HDM2_5end | |description=CAGE_peak_10_at_R3HDM2_5end | ||
|id=chr12:57735499..57735520,- | |id=chr12:57735499..57735520,- | ||
|ontology_enrichment_celltype=CL:0000453!2.05e-09!5;CL:0000990!8.49e-08!8 | |ontology_enrichment_celltype=CL:0000453!2.05e-09!5;CL:0000990!8.49e-08!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.65e-16;82!UBERON:0006222;1.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.53e-75!57;UBERON:0005068!8.53e-75!57;UBERON:0006241!8.53e-75!57;UBERON:0007135!8.53e-75!57;UBERON:0002616!3.81e-68!59;UBERON:0002780!6.13e-64!41;UBERON:0001890!6.13e-64!41;UBERON:0006240!6.13e-64!41;UBERON:0000955!8.45e-63!69;UBERON:0006238!8.45e-63!69;UBERON:0003080!3.03e-62!42;UBERON:0001017!4.47e-60!82;UBERON:0005743!1.16e-59!86;UBERON:0003075!3.13e-54!86;UBERON:0007284!3.13e-54!86;UBERON:0000073!4.99e-53!94;UBERON:0001016!4.99e-53!94;UBERON:0002346!2.40e-51!90;UBERON:0007023!2.10e-47!115;UBERON:0001893!1.09e-45!34;UBERON:0002020!3.87e-45!34;UBERON:0003528!3.87e-45!34;UBERON:0001869!7.76e-45!32;UBERON:0003056!2.85e-43!61;UBERON:0002791!5.26e-43!33;UBERON:0002619!3.50e-36!22;UBERON:0001950!1.22e-35!20;UBERON:0000033!1.18e-34!123;UBERON:0000153!1.50e-32!129;UBERON:0007811!1.50e-32!129;UBERON:0000956!1.85e-31!25;UBERON:0000203!1.85e-31!25;UBERON:0004121!3.72e-26!169;UBERON:0000924!2.70e-25!173;UBERON:0006601!2.70e-25!173;UBERON:0001894!6.26e-21!7;UBERON:0006222!6.26e-21!7;UBERON:0000025!3.03e-19!194;UBERON:0000200!4.99e-19!6;UBERON:0002420!1.54e-15!9;UBERON:0007245!1.54e-15!9;UBERON:0010009!1.54e-15!9;UBERON:0010011!1.54e-15!9;UBERON:0000454!1.54e-15!9;UBERON:0002308!4.51e-15!9;UBERON:0000125!4.51e-15!9;UBERON:0004733!7.98e-14!12;UBERON:0002028!7.98e-14!12;UBERON:0007277!7.98e-14!12;UBERON:0003076!1.02e-13!15;UBERON:0003057!1.02e-13!15;UBERON:0001871!1.26e-13!7;UBERON:0004111!2.24e-13!241;UBERON:0003296!3.52e-13!4;UBERON:0010133!3.52e-13!4;UBERON:0004732!1.17e-12!13;UBERON:0002298!3.63e-12!8;UBERON:0000483!1.41e-11!309;UBERON:0000119!2.35e-11!312;UBERON:0000477!4.35e-11!286;UBERON:0002021!7.04e-11!5;UBERON:0009663!1.35e-10!7;UBERON:0002771!3.91e-10!3;UBERON:0000349!6.45e-10!5;UBERON:0000988!3.24e-09!3;UBERON:0001896!6.46e-09!3;UBERON:0005290!6.46e-09!3;UBERON:0010096!6.46e-09!3;UBERON:0000475!3.84e-08!365;UBERON:0000064!6.49e-08!219;UBERON:0001905!7.36e-08!2;UBERON:0002757!7.36e-08!2;UBERON:0010134!7.36e-08!2;UBERON:0002784!7.36e-08!2;UBERON:0005408!7.36e-08!2;UBERON:0001899!7.36e-08!2;UBERON:0002680!9.45e-08!9;UBERON:0001895!9.45e-08!9;UBERON:0010092!9.45e-08!9;UBERON:0000369!1.22e-07!4;UBERON:0002435!1.22e-07!4;UBERON:0000204!1.22e-07!4;UBERON:0010082!1.22e-07!4;UBERON:0001870!1.35e-07!2;UBERON:0000062!4.86e-07!511;UBERON:0001876!5.26e-07!2;UBERON:0000007!5.26e-07!2;UBERON:0001897!9.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.94e-67;20!UBERON:0002619;3.72e-61;22!UBERON:0000956;9.24e-54;25!UBERON:0000203;9.24e-54;25!UBERON:0001869;3.79e-52;32!UBERON:0001893;5.92e-51;34!UBERON:0002791;4.52e-48;32!UBERON:0003528;9.38e-44;34!UBERON:0002020;9.38e-44;34!UBERON:0002780;9.57e-44;41!UBERON:0001890;9.57e-44;41!UBERON:0000200;1.84e-38;6!UBERON:0000073;1.26e-36;53!UBERON:0002616;1.26e-36;53!UBERON:0000955;2.36e-30;68!UBERON:0001017;1.76e-24;75!UBERON:0002021;1.21e-21;5!UBERON:0001870;4.54e-20;3!UBERON:0001016;1.58e-16;83!UBERON:0003296;1.23e-15;4!UBERON:0010133;1.23e-15;4!UBERON:0001894;3.09e-15;7!UBERON:0001871;3.65e-15;6!UBERON:0001905;8.14e-15;2!UBERON:0002757;8.14e-15;2!UBERON:0010134;8.14e-15;2!UBERON:0005408;8.14e-15;2!UBERON:0001899;8.14e-15;2!UBERON:0002771;7.79e-14;2!UBERON:0002702;1.08e-13;2!UBERON:0007023;7.30e-13;114!UBERON:0001872;1.40e-12;5!UBERON:0011216;1.99e-08;132!UBERON:0002902;3.20e-08;1!UBERON:0009899;3.20e-08;1!UBERON:0002581;3.80e-08;1!UBERON:0007190;4.50e-08;1!UBERON:0001882;6.10e-08;1!UBERON:0002022;6.10e-08;1!UBERON:0005403;6.10e-08;1!UBERON:0002784;7.85e-08;4!UBERON:0001874;1.39e-07;1!UBERON:0003112;1.39e-07;1!UBERON:0011158;1.39e-07;1!UBERON:0003128;1.39e-07;1!UBERON:0001703;1.39e-07;1!UBERON:0002241;1.39e-07;1!UBERON:0000369;2.38e-07;4!UBERON:0002435;2.38e-07;4!UBERON:0000204;2.38e-07;4!UBERON:0002420;4.70e-07;9!UBERON:0007245;4.70e-07;9!UBERON:0010009;4.70e-07;9!UBERON:0010011;4.70e-07;9!UBERON:0000454;4.70e-07;9!UBERON:0010314;7.31e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.07e-71,41;UBERON:0001890,5.07e-71,41;UBERON:0003080,5.07e-71,41;UBERON:0006240,5.07e-71,41;UBERON:0001950,3.17e-67,20;UBERON:0000073,7.12e-65,53;UBERON:0002616,7.12e-65,53;UBERON:0001049,3.17e-61,56;UBERON:0005068,3.17e-61,56;UBERON:0006241,3.17e-61,56;UBERON:0007135,3.17e-61,56;UBERON:0002619,3.98e-61,22;UBERON:0001869,1.48e-60,32;UBERON:0000955,3.38e-58,68;UBERON:0006238,3.38e-58,68;UBERON:0001893,6.84e-57,34;UBERON:0002791,9.28e-54,32;UBERON:0000956,9.81e-54,25;UBERON:0000203,9.81e-54,25;UBERON:0001017,2.44e-52,81;UBERON:0003528,1.71e-50,34;UBERON:0002020,1.71e-50,34;UBERON:0001016,9.43e-47,89;UBERON:0003056,9.55e-47,61;UBERON:0003075,1.23e-40,82;UBERON:0007284,1.23e-40,82;UBERON:0002346,1.47e-38,86;UBERON:0000200,2.32e-38,6;UBERON:0007023,7.34e-37,114;UBERON:0010371,3.64e-31,104;UBERON:0010314,2.79e-28,132;UBERON:0004121,2.03e-22,171;UBERON:0000924,2.03e-22,171;UBERON:0006601,2.03e-22,171;UBERON:0002021,1.42e-21,5;UBERON:0001870,6.09e-20,3;UBERON:0011216,4.51e-19,223;UBERON:0000025,5.84e-18,192;UBERON:0003296,1.01e-15,4;UBERON:0010133,1.01e-15,4;UBERON:0001871,3.04e-15,6;UBERON:0001894,3.15e-15,7;UBERON:0006222,3.15e-15,7;UBERON:0001905,8.43e-15,2;UBERON:0002757,8.43e-15,2;UBERON:0010134,8.43e-15,2;UBERON:0005408,8.43e-15,2;UBERON:0001899,8.43e-15,2;UBERON:0002771,7.07e-14,2;UBERON:0002702,1.44e-13,2;UBERON:0004111,2.12e-13,240;UBERON:0001872,1.45e-12,5;UBERON:0000483,1.91e-09,306;UBERON:0000119,2.64e-09,309;UBERON:0002902,2.89e-08,1;UBERON:0009899,2.89e-08,1;UBERON:0002581,3.80e-08,1;UBERON:0007190,4.66e-08,1;UBERON:0002022,5.33e-08,1;UBERON:0001882,6.52e-08,1;UBERON:0005403,6.52e-08,1;UBERON:0002784,7.98e-08,4;UBERON:0003112,1.11e-07,1;UBERON:0011158,1.11e-07,1;UBERON:0003128,1.11e-07,1;UBERON:0001703,1.11e-07,1;UBERON:0002241,1.11e-07,1;UBERON:0004761,1.11e-07,1;UBERON:0009617,1.11e-07,1;UBERON:0001874,1.54e-07,1;UBERON:0000369,2.58e-07,4;UBERON:0002435,2.58e-07,4;UBERON:0000204,2.58e-07,4;UBERON:0010082,2.58e-07,4;UBERON:0002420,4.90e-07,9;UBERON:0007245,4.90e-07,9;UBERON:0010009,4.90e-07,9;UBERON:0010011,4.90e-07,9;UBERON:0000454,4.90e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,4.97073823883149,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,1.18219047581419,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.104421949505455,0.471807930864739,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,5.00155288051442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0.415440338029185,0.674921674654501,0,3.64497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.29470915235301,1.001527445652,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.779441235357554,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,3.14723202972652,7.08482881627925,2.55414174491442,3.07674546361133,0,7.95308403338506,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59255575405084,0,3.10030194751776,3.48786956066487,0,0,0,0,0,7.49982570229601,15.4690512220659,1.82089681270989,0.455324382702595,0,0,0,1.42736439251347,6.18264071490781,0,0,0,1.25692471932802,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,3.67154047030939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,4.97073823883149,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75466196876175,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,1.18219047581419,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18608451472249,0.494255755786011,0.104421949505455,0.471807930864739,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,5.00155288051442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0.415440338029185,0.674921674654501,0,3.64497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,3.29470915235301,1.001527445652,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.779441235357554,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,3.14723202972652,7.08482881627925,2.55414174491442,3.07674546361133,0,7.95308403338506,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59255575405084,0,3.10030194751776,3.48786956066487,0,0,0,0,0,7.49982570229601,15.4690512220659,1.82089681270989,0.455324382702595,0,0,0,1.42736439251347,6.18264071490781,0,0,0,1.25692471932802,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,3.67154047030939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@R3HDM2 | |short_description=p10@R3HDM2 | ||
}} | }} |
Latest revision as of 14:06, 19 September 2015
Short description: | p10@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_R3HDM2_5end |
Coexpression cluster: | C257_pineal_insula_frontal_occipital_temporal_medial_paracentral |
Association with transcript: | -234bp_to_ENST00000403821_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | B5MCG9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data