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FFCP PHASE1:Mm9::chr4:129662342..129662398,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230775
|EntrezGene=230775
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8CGM1
|UniProt=Q8CGM1
|association_with_transcript=-9bp_to_ENSMUST00000106017_5end
|association_with_transcript=-9bp_to_ENSMUST00000106017_5end
|cluster_id=chr4:129662342..129662398,+
|description=CAGE_peak_2_at_Bai2_5end
|description=CAGE_peak_2_at_Bai2_5end
|id=chr4:129662342..129662398,+
|id=chr4:129662342..129662398,+
|ontology_enrichment_celltype=CL:0000221!4.37e-14!44;CL:0000133!4.37e-14!44;CL:0002319!4.65e-14!43;CL:0000540!3.04e-12!33;CL:0000047!3.04e-12!33;CL:0000031!3.04e-12!33;CL:0000404!3.04e-12!33;CL:0000117!1.58e-11!23;CL:0000337!1.58e-11!23;CL:0000055!4.95e-11!50;CL:0000393!9.35e-10!39;CL:0000211!9.35e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.56e-16,44;CL:0000133,1.56e-16,44;CL:0002319,1.70e-16,43;CL:0000540,1.79e-14,33;CL:0000047,1.79e-14,33;CL:0000031,1.79e-14,33;CL:0000404,1.79e-14,33;CL:0000117,5.79e-14,23;CL:0000337,5.79e-14,23;CL:0000393,2.01e-10,39;CL:0000211,2.01e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.77e-34!73;UBERON:0005743!3.77e-34!73;UBERON:0004121!4.12e-33!102;UBERON:0000924!4.12e-33!102;UBERON:0006601!4.12e-33!102;UBERON:0000073!7.79e-33!75;UBERON:0001016!7.79e-33!75;UBERON:0002346!9.85e-30!71;UBERON:0003075!9.85e-30!71;UBERON:0007284!9.85e-30!71;UBERON:0001049!6.60e-27!52;UBERON:0005068!6.60e-27!52;UBERON:0006241!6.60e-27!52;UBERON:0007135!6.60e-27!52;UBERON:0000955!5.09e-26!50;UBERON:0006238!5.09e-26!50;UBERON:0002616!2.84e-25!49;UBERON:0000033!3.56e-25!63;UBERON:0003080!3.57e-20!40;UBERON:0003056!4.26e-20!49;UBERON:0002020!1.46e-19!34;UBERON:0002780!1.61e-19!39;UBERON:0001890!1.61e-19!39;UBERON:0006240!1.61e-19!39;UBERON:0002791!8.99e-17!29;UBERON:0003528!8.99e-17!29;UBERON:0001893!8.99e-17!29;UBERON:0000956!8.03e-13!21;UBERON:0001869!8.03e-13!21;UBERON:0000203!8.03e-13!21;UBERON:0000153!1.02e-12!94;UBERON:0007811!1.19e-11!86;UBERON:0002619!2.11e-11!17;UBERON:0002021!3.66e-08!10;UBERON:0000411!3.66e-08!10;UBERON:0001950!3.66e-08!10;UBERON:0000468!4.51e-08!333;UBERON:0003076!3.18e-07!12;UBERON:0003057!3.18e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-41,73;UBERON:0001016,9.51e-40,75;UBERON:0000073,6.49e-35,54;UBERON:0004121,1.39e-33,95;UBERON:0000924,1.39e-33,95;UBERON:0006601,1.39e-33,95;UBERON:0001049,3.90e-33,52;UBERON:0005068,3.90e-33,52;UBERON:0006241,3.90e-33,52;UBERON:0007135,3.90e-33,52;UBERON:0002346,7.58e-31,64;UBERON:0003075,7.58e-31,64;UBERON:0007284,7.58e-31,64;UBERON:0000955,1.75e-29,47;UBERON:0006238,1.75e-29,47;UBERON:0002616,1.44e-28,46;UBERON:0010371,4.25e-28,73;UBERON:0003080,9.76e-25,40;UBERON:0002020,5.67e-24,34;UBERON:0002780,6.39e-24,39;UBERON:0001890,6.39e-24,39;UBERON:0006240,6.39e-24,39;UBERON:0010314,7.20e-24,92;UBERON:0003056,3.71e-23,49;UBERON:0003528,1.69e-20,29;UBERON:0002791,1.69e-20,29;UBERON:0001893,1.69e-20,29;UBERON:0000956,1.42e-15,21;UBERON:0001869,1.42e-15,21;UBERON:0000203,1.42e-15,21;UBERON:0002619,8.26e-14,17;UBERON:0002021,8.84e-10,10;UBERON:0000411,8.84e-10,10;UBERON:0001950,8.84e-10,10;UBERON:0003076,1.29e-08,12;UBERON:0003057,1.29e-08,12
|phase1_expression=4.00372117761985,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,3.12956537739216,1.74420125104357,4.39372365468944,2.52758868796568,1.1198913730029,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,3.43937983461316,3.70293685490423,2.53532561402472,0.338844532069132,0,0.449949858640699,0,0,8.08920298399693,6.91592949578798,2.48855069540346,2.02508907497536,2.3135745748652,12.2829923293636,8.61387309711293,3.55223317723367,3.45043695665651,5.51531271966013,18.7196997698961,15.9609172606485,11.2132769277058,3.03338461779446,1.46380229763855,3.64639359389732,8.65467296904281,8.4414391504752,12.835052813252,7.07108605136802,6.69146899755784,3.91438836233131,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0,2.22663208597237,2.08182392119363,3.34912026143355,2.7673859670727,2.41156224884196,3.76283862834255,2.63899841792318,0,0.722996784599558,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,8.19786231632332,8.79676168616511,0,0,0,0,17.8250860891739,35.2275464170342,18.4711897605911,30.5930803538407,20.7129520437568,19.9476522777178,21.2536054618763,1.83310854930569,0.124406970610093,0.505445516867349,0.210441855886474,0.520481771850815,0.919608417733892,1.80062129805349,2.10986744970001,2.31324097114515,1.0249097622788,1.3118241438362,2.06962696591213,0.431135985865684,0.567318240503458,2.46331573829528,2.41115305670332,4.44875598760957,2.78601733217733,2.26360350048738,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.900310307305074,0.23674473558521,0.590292695242212,1.3884040159864,1.62773761325285,0.804820204198858,0,0.329119699826961,0,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,42.2682796613896,6.89460902941206,0,0,1.06644125267617,0.928946687441754,1.15980715189884,0.201683524623343,1.11189021922435,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,1.70701110857774,0.913988100877831,3.38123207019241,0,0.387904974335251,0.280543279561274,0.379419222745544,0.295220295959204,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.162964976442026,0,0.938760993154008,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0,11.559642479121,9.25972324078405,0.163934945376675,0,1.57754109708128,0.390438744296638,1.07711698866399,1.19484398976276,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,1.58115111178609,22.1711708331047,1.56134093729095,2.67098405500883,1.79175655288934,1.31976098378028,0,0.728341908464944,0.604647113929502,0,1.47650946440386,0.307435147943927,0.516856586336442,0,1.06949213515416,0,0,0,3.40439605753788,1.08036656418786,1.03486947026204,1.28602221018955,2.48276327099183,3.21063871683727,2.30368628842969,1.8267896946876,0,0,0.661585194164886,2.63818004706368,0.968786560175433,1.08563264870681,0.358117032009409,0.984845398470368,0,10.3838169125885,0.854354403989263,4.54051109519089,0.925972636848558,0,0.410082683163076,0,0,0,0,0,0.949007980743406,1.01659733563424,1.40406943068342,1.67270636811575,0.218362563746178,1.07891477107857,0.743881101528023,0.523511883968059,0.259229946583586,0,0,0.448549638131936,0.66183396182839,1.75006069509643,2.0665571756437,1.35164900392623,0.58678619322877,0.911430693907651,0.734015410979976,0.483168241652012,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0.443971906748129,0,0.335769232728157,1.15913756419314,0.375364950902364,0.36630324853453,0.643105137237198,0,19.7663144915973,18.4130094602871,22.9158205375759,31.1054260042075,20.5524755931193,25.6833925112498,22.9507650078814,28.3702358031259,32.1731110378785,32.1011393286128,0.207574695168353,0.798049746802062,0.853668028770671,3.8897074730927,1.46729213839588,0.919217542250071,1.55572709461131,0.412070114477788,3.20919209591815,2.02157769411038,3.29523089857312,1.69763707247469,1.49826411951812,1.6646539625266,1.83793500657962,1.42888107384922,1.50649623728312,1.35036454324594,2.06042950401653,1.03039244094078,2.05721551431249,1.24233064311536,1.90748951957857,0.726732083161643,1.12931256498397,2.11536519729191,1.28049581010941,2.36762740294059,1.35804113845862,2.24456908663095,0.711810108745045,1.77308068276014,0.818462086339379,2.47898945897546,1.73615949883027,3.49734809113124,0.233931608445408,1.28922632428979,1.14772999241306,1.32354851471709,0.695603506861264
|phase1_expression=4.00372117761985,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,3.99703463710028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.550640256485045,3.12956537739216,1.74420125104357,4.39372365468944,2.52758868796568,1.1198913730029,2.87505128729943,0,0,0,0.257259436035947,0.286533439938757,0,3.43937983461316,3.70293685490423,2.53532561402472,0.338844532069132,0,0.449949858640699,0,0,8.08920298399693,6.91592949578798,2.48855069540346,2.02508907497536,2.3135745748652,12.2829923293636,8.61387309711293,3.55223317723367,3.45043695665651,5.51531271966013,18.7196997698961,15.9609172606485,11.2132769277058,3.03338461779446,1.46380229763855,3.64639359389732,8.65467296904281,8.4414391504752,12.835052813252,7.07108605136802,6.69146899755784,3.91438836233131,0.075726193333184,0.226714680320357,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0,2.22663208597237,2.08182392119363,3.34912026143355,2.7673859670727,2.41156224884196,3.76283862834255,2.63899841792318,0,0.722996784599558,0.884610551949874,0.647067399789637,0.220841518460394,0.484875253135222,0,8.19786231632332,8.79676168616511,0,0,0,0,17.8250860891739,35.2275464170342,18.4711897605911,30.5930803538407,20.7129520437568,19.9476522777178,21.2536054618763,1.83310854930569,0.124406970610093,0.505445516867349,0.210441855886474,0.520481771850815,0.919608417733892,1.80062129805349,2.10986744970001,2.31324097114515,1.0249097622788,1.3118241438362,2.06962696591213,0.431135985865684,0.567318240503458,2.46331573829528,2.41115305670332,4.44875598760957,2.78601733217733,2.26360350048738,0.398068533636986,0,0,0,0.414251545071004,0.938104239924385,0.900310307305074,0.23674473558521,0.590292695242212,1.3884040159864,1.62773761325285,0.804820204198858,0,0.329119699826961,0,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,42.2682796613896,6.89460902941206,0,0,1.06644125267617,0.928946687441754,1.15980715189884,0.201683524623343,1.11189021922435,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0,1.70701110857774,0.913988100877831,3.38123207019241,0,0.387904974335251,0.280543279561274,0.379419222745544,0.295220295959204,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.162964976442026,0,0.938760993154008,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,0,0,11.559642479121,9.25972324078405,0.163934945376675,0,1.57754109708128,0.390438744296638,1.07711698866399,1.19484398976276,1.78238939265915,1.98153571552183,1.21443210502468,1.46127928955656,1.58115111178609,22.1711708331047,1.56134093729095,2.67098405500883,1.79175655288934,1.31976098378028,0,0.728341908464944,0.604647113929502,0,1.47650946440386,0.307435147943927,0.516856586336442,0,1.06949213515416,0,0,0,3.40439605753788,1.08036656418786,1.03486947026204,1.28602221018955,2.48276327099183,3.21063871683727,2.30368628842969,1.8267896946876,0,0,0.661585194164886,2.63818004706368,0.968786560175433,1.08563264870681,0.358117032009409,0.984845398470368,0,10.3838169125885,0.854354403989263,4.54051109519089,0.925972636848558,0,0.410082683163076,0,0,0,0,0,0.949007980743406,1.01659733563424,1.40406943068342,1.67270636811575,0.218362563746178,1.07891477107857,0.743881101528023,0.523511883968059,0.259229946583586,0,0,0.448549638131936,0.66183396182839,1.75006069509643,2.0665571756437,1.35164900392623,0.58678619322877,0.911430693907651,0.734015410979976,0.483168241652012,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0.116876902181569,0.453460767230423,0.443971906748129,0,0.335769232728157,1.15913756419314,0.375364950902364,0.36630324853453,0.643105137237198,0,19.7663144915973,18.4130094602871,22.9158205375759,31.1054260042075,20.5524755931193,25.6833925112498,22.9507650078814,28.3702358031259,32.1731110378785,32.1011393286128,0.207574695168353,0.798049746802062,0.853668028770671,3.8897074730927,1.46729213839588,0.919217542250071,1.55572709461131,0.412070114477788,3.20919209591815,2.02157769411038,3.29523089857312,1.69763707247469,1.49826411951812,1.6646539625266,1.83793500657962,1.42888107384922,1.50649623728312,1.35036454324594,2.06042950401653,1.03039244094078,2.05721551431249,1.24233064311536,1.90748951957857,0.726732083161643,1.12931256498397,2.11536519729191,1.28049581010941,2.36762740294059,1.35804113845862,2.24456908663095,0.711810108745045,1.77308068276014,0.818462086339379,2.47898945897546,1.73615949883027,3.49734809113124,0.233931608445408,1.28922632428979,1.14772999241306,1.32354851471709,0.695603506861264
|short_description=p2@Bai2
|short_description=p2@Bai2
}}
}}

Latest revision as of 09:53, 26 September 2015

Short description:p2@Bai2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Bai2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -9bp_to_ENSMUST00000106017_5end
EntrezGene:Bai2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Bai2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.65
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.83
corpus striatum, adult.CNhs10487.19-21D835.23
corpus striatum, neonate N00.CNhs11226.630-43F118.47
cortex, adult.CNhs10473.12-14D530.59
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B221.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E842.27
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A39.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I922.17
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.10
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.56e-1644
neurectodermal cell1.56e-1644
neural cell1.70e-1643
neuron1.79e-1433
neuronal stem cell1.79e-1433
neuroblast1.79e-1433
electrically signaling cell1.79e-1433
CNS neuron (sensu Vertebrata)5.79e-1423
neuroblast (sensu Vertebrata)5.79e-1423
electrically responsive cell2.01e-1039
electrically active cell2.01e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.07e-4173
nervous system9.51e-4075
regional part of nervous system6.49e-3554
ectoderm-derived structure1.39e-3395
ectoderm1.39e-3395
presumptive ectoderm1.39e-3395
neural tube3.90e-3352
neural rod3.90e-3352
future spinal cord3.90e-3352
neural keel3.90e-3352
neurectoderm7.58e-3164
neural plate7.58e-3164
presumptive neural plate7.58e-3164
brain1.75e-2947
future brain1.75e-2947
regional part of brain1.44e-2846
ecto-epithelium4.25e-2873
anterior neural tube9.76e-2540
gray matter5.67e-2434
regional part of forebrain6.39e-2439
forebrain6.39e-2439
future forebrain6.39e-2439
structure with developmental contribution from neural crest7.20e-2492
pre-chordal neural plate3.71e-2349
brain grey matter1.69e-2029
regional part of telencephalon1.69e-2029
telencephalon1.69e-2029
cerebral cortex1.42e-1521
cerebral hemisphere1.42e-1521
pallium1.42e-1521
regional part of cerebral cortex8.26e-1417
occipital lobe8.84e-1010
visual cortex8.84e-1010
neocortex8.84e-1010
posterior neural tube1.29e-0812
chordal neural plate1.29e-0812
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