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FFCP PHASE1:Mm9::chr4:48058016..48058032,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18124
|EntrezGene=18124
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q9QZB6
|UniProt=Q9QZB6
|association_with_transcript=0bp_to_ENSMUST00000030025_5end
|association_with_transcript=0bp_to_ENSMUST00000030025_5end
|cluster_id=chr4:48058016..48058032,+
|description=CAGE_peak_3_at_Nr4a3_5end
|description=CAGE_peak_3_at_Nr4a3_5end
|id=chr4:48058016..48058032,+
|id=chr4:48058016..48058032,+
|ontology_enrichment_celltype=CL:0000791!1.51e-07!9;CL:0000789!1.51e-07!9;CL:0002420!1.51e-07!9;CL:0002419!1.51e-07!9;CL:0000790!1.51e-07!9;CL:0000624!7.35e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,4.94e-09,9;CL:0000789,4.94e-09,9;CL:0002420,4.94e-09,9;CL:0002419,4.94e-09,9;CL:0000790,4.94e-09,9;CL:0000624,3.54e-08,8;CL:0000838,2.09e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.69e-14!102;UBERON:0000924!3.69e-14!102;UBERON:0006601!3.69e-14!102;UBERON:0002020!1.48e-13!34;UBERON:0000073!4.01e-13!75;UBERON:0001016!4.01e-13!75;UBERON:0001017!4.84e-13!73;UBERON:0005743!4.84e-13!73;UBERON:0007811!5.72e-13!86;UBERON:0002780!6.38e-13!39;UBERON:0001890!6.38e-13!39;UBERON:0006240!6.38e-13!39;UBERON:0003080!6.88e-13!40;UBERON:0001049!7.32e-13!52;UBERON:0005068!7.32e-13!52;UBERON:0006241!7.32e-13!52;UBERON:0007135!7.32e-13!52;UBERON:0000955!8.43e-13!50;UBERON:0006238!8.43e-13!50;UBERON:0002616!2.88e-12!49;UBERON:0002346!3.09e-12!71;UBERON:0003075!3.09e-12!71;UBERON:0007284!3.09e-12!71;UBERON:0002791!3.28e-12!29;UBERON:0003528!3.28e-12!29;UBERON:0001893!3.28e-12!29;UBERON:0000153!8.68e-12!94;UBERON:0000033!1.39e-11!63;UBERON:0000956!2.13e-10!21;UBERON:0001869!2.13e-10!21;UBERON:0000203!2.13e-10!21;UBERON:0003056!6.75e-10!49;UBERON:0002619!2.51e-08!17;UBERON:0000064!2.77e-07!99;UBERON:0002021!3.41e-07!10;UBERON:0000411!3.41e-07!10;UBERON:0001950!3.41e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.72e-15,34;UBERON:0000073,9.49e-15,54;UBERON:0001049,1.05e-13,52;UBERON:0005068,1.05e-13,52;UBERON:0006241,1.05e-13,52;UBERON:0007135,1.05e-13,52;UBERON:0002780,1.32e-13,39;UBERON:0001890,1.32e-13,39;UBERON:0006240,1.32e-13,39;UBERON:0003080,1.37e-13,40;UBERON:0003528,4.33e-13,29;UBERON:0002791,4.33e-13,29;UBERON:0001893,4.33e-13,29;UBERON:0001017,9.49e-13,73;UBERON:0001016,1.29e-12,75;UBERON:0000955,1.57e-12,47;UBERON:0006238,1.57e-12,47;UBERON:0002616,6.55e-12,46;UBERON:0000956,3.61e-11,21;UBERON:0001869,3.61e-11,21;UBERON:0000203,3.61e-11,21;UBERON:0002346,1.49e-09,64;UBERON:0003075,1.49e-09,64;UBERON:0007284,1.49e-09,64;UBERON:0003056,1.50e-09,49;UBERON:0004121,1.64e-09,95;UBERON:0000924,1.64e-09,95;UBERON:0006601,1.64e-09,95;UBERON:0010314,3.16e-09,92;UBERON:0010371,4.47e-09,73;UBERON:0002619,1.22e-08,17;UBERON:0002021,1.36e-08,10;UBERON:0000411,1.36e-08,10;UBERON:0001950,1.36e-08,10
|phase1_expression=4.48416771893423,0.348975407639361,0.454999239389536,2.72217790176147,2.00358291978539,1.84667199103079,3.03696432774183,34.3468040354593,377.313775366467,347.117692535516,94.3411004922532,64.3761323092365,26.5361131393369,30.3348796393921,0,0.202475267389826,0,0.946386496074713,0.411343300817216,2.12194825899015,2.12608225377674,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0.646413698057667,0,0,0,0.635030673459631,0,0,1.44425809875637,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,0,5.88231488031014,2.73218193983378,0.971020706062307,0.755380907853464,0.304130793658544,0.367093504323363,0,0.436050312760893,2.41654801007919,2.72201858703997,0.839918529752175,0,30.3686516964503,164.657206236575,133.429238259558,0.514518872071894,0.573066879877513,2.06268836910977,1.61853168687678,2.11596391708813,0.633831403506179,0,0,0,0,0,1.19840044207362,1.53687322128622,7.05089363697648,15.5256829081444,9.88527318351495,1.14260393761521,2.42955395046775,1.22490799214954,0.862609239164127,0.919218786610021,1.10115880999389,3.70293280447044,4.6081959976873,2.1101806036831,3.11057988248193,2.08365348222704,1.3959149950069,0.56276261003168,5.04234217663473,3.53554302568401,4.27115042397309,2.05039390407831,1.8931548333296,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0,0,0.983110940922263,0,0,1.06001872353102,9.15482228548423,0,2.54805239706646,0,0,0,0,1.94112595522402,11.1343289968284,12.1722554033156,1.56136794089522,3.04465478312141,3.68984795609694,2.41156224884196,3.76283862834255,4.90099706185734,0.741584903203122,5.35017620603673,0,0.647067399789637,1.32504911076236,0,1.86391761218122,5.5628351432194,1.67557365450764,1.02182822083437,11.981512450592,2.99951365496704,5.59108999121485,1.04853447583376,9.60751265919116,3.01570445070875,8.34356736922927,4.85859368927628,2.90903262383384,3.56930778749067,0,0.622034853050465,0,2.94618598241064,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.281105173679186,0.776110112217047,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0.696504333044333,1.85203922767149,0.398068533636986,0.702213187313235,1.02939162845886,1.42081749697796,0.621377317606506,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.32833492815819,0.648550476366846,3.36259971078264,1.3173006917463,0.536825675041487,28.1788531075931,45.9983617335401,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0.596869416123452,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0.482443521363367,2.77129785249907,0,0.325929952884052,0,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.983179888294428,1.03610989119537,0.433947175744535,0,0,0.983528546038072,0,0.321101179975584,0.234423373184406,0,1.51482556322624,0.631016438832513,0,1.29254038639679,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,17.9939937196212,0.709700426041343,0.178065603667255,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,1.26414703174326,0,1.03135543248187,5.10659408630682,0.36012218806262,0.258717367565509,0.428674070063185,2.6601035046341,1.96205699362278,1.64549020602121,2.13125464380219,2.11204537257339,0,1.32317038832977,2.4732937941222,1.13025098687134,0.904693873922338,0.835606408021955,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,30.596117398894,32.6086883914123,21.4209959396857,0,0.158167996790568,0,0.108005340821801,0,0.655087691238533,0.404593039154462,0.247960367176008,1.57053565190418,0.648074866458964,1.24267862617385,1.12738587736838,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.39061315453185,0.524296722128554,0.241584120826006,0.576060012515731,2.52808896502543,0,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,0.480781798079875,0.443068581523732,1.00966449948148,0.685861259894999,0.907435666231565,2.72882066071307,2.30908419936791,1.75315353272353,3.17422537061296,0,0,0.335769232728157,1.54551675225752,2.81523713176773,0.36630324853453,0.214368379079066,28.0880378259804,23.1548255472997,19.7939851698086,26.3531936182122,20.6223818812425,17.1270629942661,6.7985450765073,15.5255175053315,18.0128481289688,32.6262534468627,20.7104124700728,0.31136204275253,1.19707462020309,0.512200817262403,1.45864030240976,1.67690530102386,1.83843508450014,0.666740183404846,1.85431551515005,1.60459604795908,1.01078884705519,1.52087579934144,1.32038438970253,1.31098110457835,1.79270426733634,1.32101578597911,1.42888107384922,1.0429589335037,2.12200142510076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|phase1_expression=4.48416771893423,0.348975407639361,0.454999239389536,2.72217790176147,2.00358291978539,1.84667199103079,3.03696432774183,34.3468040354593,377.313775366467,347.117692535516,94.3411004922532,64.3761323092365,26.5361131393369,30.3348796393921,0,0.202475267389826,0,0.946386496074713,0.411343300817216,2.12194825899015,2.12608225377674,0.0992909512008853,0.261199789138935,0,0,0,0.430761996159075,0.646413698057667,0,0,0,0.635030673459631,0,0,1.44425809875637,0.332469290716985,1.02084678131185,0.837063261473815,0.7813353445238,0,5.88231488031014,2.73218193983378,0.971020706062307,0.755380907853464,0.304130793658544,0.367093504323363,0,0.436050312760893,2.41654801007919,2.72201858703997,0.839918529752175,0,30.3686516964503,164.657206236575,133.429238259558,0.514518872071894,0.573066879877513,2.06268836910977,1.61853168687678,2.11596391708813,0.633831403506179,0,0,0,0,0,1.19840044207362,1.53687322128622,7.05089363697648,15.5256829081444,9.88527318351495,1.14260393761521,2.42955395046775,1.22490799214954,0.862609239164127,0.919218786610021,1.10115880999389,3.70293280447044,4.6081959976873,2.1101806036831,3.11057988248193,2.08365348222704,1.3959149950069,0.56276261003168,5.04234217663473,3.53554302568401,4.27115042397309,2.05039390407831,1.8931548333296,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0,0,0.983110940922263,0,0,1.06001872353102,9.15482228548423,0,2.54805239706646,0,0,0,0,1.94112595522402,11.1343289968284,12.1722554033156,1.56136794089522,3.04465478312141,3.68984795609694,2.41156224884196,3.76283862834255,4.90099706185734,0.741584903203122,5.35017620603673,0,0.647067399789637,1.32504911076236,0,1.86391761218122,5.5628351432194,1.67557365450764,1.02182822083437,11.981512450592,2.99951365496704,5.59108999121485,1.04853447583376,9.60751265919116,3.01570445070875,8.34356736922927,4.85859368927628,2.90903262383384,3.56930778749067,0,0.622034853050465,0,2.94618598241064,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.512454881139399,0.281105173679186,0.776110112217047,0,0.567318240503458,0.351902248327898,0.219195732427575,0,0.696504333044333,1.85203922767149,0.398068533636986,0.702213187313235,1.02939162845886,1.42081749697796,0.621377317606506,0.469052119962192,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.822799249567402,0.32833492815819,0.648550476366846,3.36259971078264,1.3173006917463,0.536825675041487,28.1788531075931,45.9983617335401,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0.596869416123452,0,0,0.432276099749388,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,2.87536413054709,0.372140947668503,0,0,0,0.482443521363367,2.77129785249907,0,0.325929952884052,0,0.234690248288502,0,0,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.983179888294428,1.03610989119537,0.433947175744535,0,0,0.983528546038072,0,0.321101179975584,0.234423373184406,0,1.51482556322624,0.631016438832513,0,1.29254038639679,0.238968797952552,0.891194696329576,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,17.9939937196212,0.709700426041343,0.178065603667255,0,0.659880491890142,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,1.26414703174326,0,1.03135543248187,5.10659408630682,0.36012218806262,0.258717367565509,0.428674070063185,2.6601035046341,1.96205699362278,1.64549020602121,2.13125464380219,2.11204537257339,0,1.32317038832977,2.4732937941222,1.13025098687134,0.904693873922338,0.835606408021955,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.228778173206523,30.596117398894,32.6086883914123,21.4209959396857,0,0.158167996790568,0,0.108005340821801,0,0.655087691238533,0.404593039154462,0.247960367176008,1.57053565190418,0.648074866458964,1.24267862617385,1.12738587736838,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.39061315453185,0.524296722128554,0.241584120826006,0.576060012515731,2.52808896502543,0,0.308132871494482,0.25984164595559,0.179026695667481,0.79472541912506,0.480781798079875,0.443068581523732,1.00966449948148,0.685861259894999,0.907435666231565,2.72882066071307,2.30908419936791,1.75315353272353,3.17422537061296,0,0,0.335769232728157,1.54551675225752,2.81523713176773,0.36630324853453,0.214368379079066,28.0880378259804,23.1548255472997,19.7939851698086,26.3531936182122,20.6223818812425,17.1270629942661,6.7985450765073,15.5255175053315,18.0128481289688,32.6262534468627,20.7104124700728,0.31136204275253,1.19707462020309,0.512200817262403,1.45864030240976,1.67690530102386,1.83843508450014,0.666740183404846,1.85431551515005,1.60459604795908,1.01078884705519,1.52087579934144,1.32038438970253,1.31098110457835,1.79270426733634,1.32101578597911,1.42888107384922,1.0429589335037,2.12200142510076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|short_description=p3@Nr4a3
|short_description=p3@Nr4a3
}}
}}

Latest revision as of 01:41, 27 September 2015

Short description:p3@Nr4a3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nr4a3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000030025_5end
EntrezGene:Nr4a3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nr4a3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7377.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2347.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E694.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F164.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E830.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A230.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9164.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1133.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.53
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H911.13
adrenal gland, adult.CNhs10508.49-24D712.17
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.59
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E828.18
hippocampus, neonate N00.CNhs11228.627-43G146.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.42
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.15
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter8.72e-1534
regional part of nervous system9.49e-1554
neural tube1.05e-1352
neural rod1.05e-1352
future spinal cord1.05e-1352
neural keel1.05e-1352
regional part of forebrain1.32e-1339
forebrain1.32e-1339
future forebrain1.32e-1339
anterior neural tube1.37e-1340
brain grey matter4.33e-1329
regional part of telencephalon4.33e-1329
telencephalon4.33e-1329
central nervous system9.49e-1373
nervous system1.29e-1275
brain1.57e-1247
future brain1.57e-1247
regional part of brain6.55e-1246
cerebral cortex3.61e-1121
cerebral hemisphere3.61e-1121
pallium3.61e-1121
neurectoderm1.49e-0964
neural plate1.49e-0964
presumptive neural plate1.49e-0964
pre-chordal neural plate1.50e-0949
ectoderm-derived structure1.64e-0995
ectoderm1.64e-0995
presumptive ectoderm1.64e-0995
structure with developmental contribution from neural crest3.16e-0992
ecto-epithelium4.47e-0973
regional part of cerebral cortex1.22e-0817
occipital lobe1.36e-0810
visual cortex1.36e-0810
neocortex1.36e-0810
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