FFCP PHASE1:Mm9::chr4:48058047..48058062,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18124 | |EntrezGene=18124 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QZB6 | |UniProt=Q9QZB6 | ||
|association_with_transcript=22bp_to_ENSMUST00000030025_5end | |association_with_transcript=22bp_to_ENSMUST00000030025_5end | ||
|cluster_id=chr4:48058047..48058062,+ | |||
|description=CAGE_peak_1_at_Nr4a3_5end | |description=CAGE_peak_1_at_Nr4a3_5end | ||
|id=chr4:48058047..48058062,+ | |id=chr4:48058047..48058062,+ | ||
|ontology_enrichment_celltype=CL:0000791!2.17e-07!9;CL:0000789!2.17e-07!9;CL:0002420!2.17e-07!9;CL:0002419!2.17e-07!9;CL:0000790!2.17e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.93e-09,9;CL:0000789,1.93e-09,9;CL:0002420,1.93e-09,9;CL:0002419,1.93e-09,9;CL:0000790,1.93e-09,9;CL:0000624,1.68e-08,8;CL:0000838,6.19e-08,12;CL:0000084,4.46e-07,11;CL:0000827,4.46e-07,11;CL:0000542,5.04e-07,13;CL:0000051,5.04e-07,13;CL:0000893,9.57e-07,6;CL:0002489,9.57e-07,6;CL:0000898,9.57e-07,6;CL:0000809,9.57e-07,6;CL:0000810,9.57e-07,6;CL:0000895,9.57e-07,6;CL:0000808,9.57e-07,6;CL:0000894,9.57e-07,6;CL:0000806,9.57e-07,6;CL:0000807,9.57e-07,6;CL:0000805,9.57e-07,6;CL:0002425,9.57e-07,6;CL:0002436,9.57e-07,6;CL:0002427,9.57e-07,6;CL:0002428,9.57e-07,6;CL:0002429,9.57e-07,6;CL:0002433,9.57e-07,6;CL:0002431,9.57e-07,6;CL:0002432,9.57e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!3.92e-11!99;UBERON:0002020!2.09e-10!34;UBERON:0007811!3.63e-10!86;UBERON:0000956!2.95e-09!21;UBERON:0001869!2.95e-09!21;UBERON:0000203!2.95e-09!21;UBERON:0002791!6.42e-09!29;UBERON:0003528!6.42e-09!29;UBERON:0001893!6.42e-09!29;UBERON:0004121!1.08e-08!102;UBERON:0000924!1.08e-08!102;UBERON:0006601!1.08e-08!102;UBERON:0000153!3.27e-08!94;UBERON:0003080!7.29e-08!40;UBERON:0002780!1.03e-07!39;UBERON:0001890!1.03e-07!39;UBERON:0006240!1.03e-07!39;UBERON:0002346!2.10e-07!71;UBERON:0003075!2.10e-07!71;UBERON:0007284!2.10e-07!71;UBERON:0002619!2.13e-07!17;UBERON:0000955!2.16e-07!50;UBERON:0006238!2.16e-07!50;UBERON:0000073!2.76e-07!75;UBERON:0001016!2.76e-07!75;UBERON:0001049!3.72e-07!52;UBERON:0005068!3.72e-07!52;UBERON:0006241!3.72e-07!52;UBERON:0007135!3.72e-07!52;UBERON:0001017!5.76e-07!73;UBERON:0005743!5.76e-07!73;UBERON:0002616!6.34e-07!49;UBERON:0000033!7.62e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,9.13e-12,34;UBERON:0000956,8.87e-11,21;UBERON:0001869,8.87e-11,21;UBERON:0000203,8.87e-11,21;UBERON:0003528,8.46e-10,29;UBERON:0002791,8.46e-10,29;UBERON:0001893,8.46e-10,29;UBERON:0000073,1.12e-09,54;UBERON:0001049,1.70e-08,52;UBERON:0005068,1.70e-08,52;UBERON:0006241,1.70e-08,52;UBERON:0007135,1.70e-08,52;UBERON:0002619,2.54e-08,17;UBERON:0002021,3.09e-08,10;UBERON:0000411,3.09e-08,10;UBERON:0001950,3.09e-08,10;UBERON:0003080,4.05e-08,40;UBERON:0002780,6.41e-08,39;UBERON:0001890,6.41e-08,39;UBERON:0006240,6.41e-08,39;UBERON:0000955,9.66e-08,47;UBERON:0006238,9.66e-08,47;UBERON:0002616,3.70e-07,46;UBERON:0001016,8.62e-07,75 | |||
|phase1_expression=15.0539916278506,1.04692622291808,2.27499619694768,1.20985684522732,3.50627010962443,2.35030980676646,1.86890112476421,14.332688902015,1965.55134995942,1362.02147866768,110.435589505451,83.0428175141452,8.9024379564227,7.34331380319578,0.666219523631325,0,0,0.788655413395594,0.548457734422955,1.27316895539409,3.82694805679814,0,0,0.95995453676044,0.22940928106717,0.57423196411502,0,1.07735616342945,0.190023419456374,0,0,0,0,0,1.1554064790051,0.166234645358492,1.22501613757421,0,0,0,1.17646297606203,0,0,0.251793635951155,0.202753862439029,1.46837401729345,0,1.96222640742402,1.31811709640683,1.36100929351998,0.279972843250725,0,34.2276516357782,200.925313337142,132.757050661273,1.02903774414379,0,1.54701627683233,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,2.68952813725088,6.84351441235953,6.21027316325777,6.30974884054146,2.57085885963423,1.32521124570968,0.367472397644862,1.0543001812006,0.919218786610021,1.10115880999389,1.40456071893706,2.30409799884365,0.527545150920775,0.640413505216868,3.12548022334056,0.279182999001381,0,2.13917546887534,3.24091444021034,2.56269025438385,1.4911955666024,6.96680978665293,0.529000920747499,3.18850937571846,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,45.3515811680911,0,0,0,0,0.253359865475099,0,3.31133251185274,16.0541487861246,19.445920217492,0.693941307064543,3.65358573974569,2.53677046981664,2.56228488939458,2.11659672844269,7.6656620711102,0.247194967734374,8.6759614151947,0,0.323533699894818,1.32504911076236,0.969750506270444,3.72783522436244,1.46390398505774,0,1.02182822083437,6.94927722134338,2.99951365496704,3.30382590389968,1.19832511523858,5.94750783664214,2.38743269014442,3.12883776346098,0.767146371990992,1.0389402227978,0.648965052271031,0.509196819251581,0.497627882440372,0,1.26265113531884,0,0,0.540186389416048,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,1.55222022443409,0,0.189106080167819,0,0,0,0,0.61734640922383,0,0.702213187313235,1.28673953557358,2.84163499395593,0.414251545071004,0,0.540186184383045,0,0,0,0,0.536546802799238,0.700592054203017,0.329119699826961,0.656669856316381,0.405344047729279,10.5263990946239,0.878200461164203,0.536825675041487,11.1453672738987,28.6074822414411,1.32167513193519,1.58670339998127,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,2.21703828199926,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0.221464689648775,0.637819074629948,0.81931657357869,0.345369963731791,1.3018415272336,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,1.51482556322624,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0,19.921921618152,0.567760340833074,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,1.26414703174326,0,1.03135543248187,5.7874732978144,0,0,0.214337035031592,1.24138163549592,0.891844088010353,0.329098041204242,1.522324745573,2.3467170806371,0.21183207086382,0.661585194164886,2.96795255294664,4.03661066739764,0.542816324353403,0.596861720015682,0.164140899745061,0.291480836629851,0,1.19609616558497,0,0,0.188368457004691,0.683471138605126,1.14389086603261,21.7572390392135,18.6135431590465,17.8277966207707,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.655087691238533,0.269728692769641,1.90102948168273,2.09404753587224,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0,0,0,6.32022241256356,0,0.102710957164827,0,0.358053391334963,1.78813219303138,2.04332264183947,2.51072196196781,2.52416124870369,2.66723823292499,4.03304740547362,5.65255708290564,7.79315917286669,5.02570679380746,2.26730383615211,0.221985953374065,0,0.167884616364078,3.67060228661162,2.43987218086537,0.36630324853453,0.428736758158132,9.5298699766719,7.34177395402186,4.60325236507177,9.16632821503035,8.93636548187176,6.16574267793578,2.2661816921691,12.8254275044043,7.65546045481175,15.8599843144472,5.69536342927002,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,1.55572709461131,1.03017528619447,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.842773567228942,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.238436189947321,0.872078499793971,0.188218760830661,0.761531471025089,0.182927972872773,0.526139422875686,0.950628796921032,0,0.237270036248348,1.18205378850676,0.409231043169689,0.929621047115796,0.771626443924566,3.2475375131933,1.16965804222704,1.93383948643468,1.14772999241306,0.220591419119515,0 | |phase1_expression=15.0539916278506,1.04692622291808,2.27499619694768,1.20985684522732,3.50627010962443,2.35030980676646,1.86890112476421,14.332688902015,1965.55134995942,1362.02147866768,110.435589505451,83.0428175141452,8.9024379564227,7.34331380319578,0.666219523631325,0,0,0.788655413395594,0.548457734422955,1.27316895539409,3.82694805679814,0,0,0.95995453676044,0.22940928106717,0.57423196411502,0,1.07735616342945,0.190023419456374,0,0,0,0,0,1.1554064790051,0.166234645358492,1.22501613757421,0,0,0,1.17646297606203,0,0,0.251793635951155,0.202753862439029,1.46837401729345,0,1.96222640742402,1.31811709640683,1.36100929351998,0.279972843250725,0,34.2276516357782,200.925313337142,132.757050661273,1.02903774414379,0,1.54701627683233,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0.599200221036809,2.68952813725088,6.84351441235953,6.21027316325777,6.30974884054146,2.57085885963423,1.32521124570968,0.367472397644862,1.0543001812006,0.919218786610021,1.10115880999389,1.40456071893706,2.30409799884365,0.527545150920775,0.640413505216868,3.12548022334056,0.279182999001381,0,2.13917546887534,3.24091444021034,2.56269025438385,1.4911955666024,6.96680978665293,0.529000920747499,3.18850937571846,0,0,0.539703191637817,0,0,3.37066608316204,0,0,0,45.3515811680911,0,0,0,0,0.253359865475099,0,3.31133251185274,16.0541487861246,19.445920217492,0.693941307064543,3.65358573974569,2.53677046981664,2.56228488939458,2.11659672844269,7.6656620711102,0.247194967734374,8.6759614151947,0,0.323533699894818,1.32504911076236,0.969750506270444,3.72783522436244,1.46390398505774,0,1.02182822083437,6.94927722134338,2.99951365496704,3.30382590389968,1.19832511523858,5.94750783664214,2.38743269014442,3.12883776346098,0.767146371990992,1.0389402227978,0.648965052271031,0.509196819251581,0.497627882440372,0,1.26265113531884,0,0,0.540186389416048,0.30140963567143,0.272145996605311,0.384341160854549,0.281105173679186,1.55222022443409,0,0.189106080167819,0,0,0,0,0.61734640922383,0,0.702213187313235,1.28673953557358,2.84163499395593,0.414251545071004,0,0.540186184383045,0,0,0,0,0.536546802799238,0.700592054203017,0.329119699826961,0.656669856316381,0.405344047729279,10.5263990946239,0.878200461164203,0.536825675041487,11.1453672738987,28.6074822414411,1.32167513193519,1.58670339998127,0.213288250535234,0,0,0.201683524623343,0,0.190225626112559,0.949058123089023,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0.482443521363367,2.21703828199926,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0.221464689648775,0.637819074629948,0.81931657357869,0.345369963731791,1.3018415272336,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0,1.51482556322624,0.315508219416257,0,0.646270193198397,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.584511715822624,0,19.921921618152,0.567760340833074,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,1.26414703174326,0,1.03135543248187,5.7874732978144,0,0,0.214337035031592,1.24138163549592,0.891844088010353,0.329098041204242,1.522324745573,2.3467170806371,0.21183207086382,0.661585194164886,2.96795255294664,4.03661066739764,0.542816324353403,0.596861720015682,0.164140899745061,0.291480836629851,0,1.19609616558497,0,0,0.188368457004691,0.683471138605126,1.14389086603261,21.7572390392135,18.6135431590465,17.8277966207707,1.90934123603023,0.158167996790568,0,0.108005340821801,0,0.655087691238533,0.269728692769641,1.90102948168273,2.09404753587224,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.911430693907651,0,0,0,6.32022241256356,0,0.102710957164827,0,0.358053391334963,1.78813219303138,2.04332264183947,2.51072196196781,2.52416124870369,2.66723823292499,4.03304740547362,5.65255708290564,7.79315917286669,5.02570679380746,2.26730383615211,0.221985953374065,0,0.167884616364078,3.67060228661162,2.43987218086537,0.36630324853453,0.428736758158132,9.5298699766719,7.34177395402186,4.60325236507177,9.16632821503035,8.93636548187176,6.16574267793578,2.2661816921691,12.8254275044043,7.65546045481175,15.8599843144472,5.69536342927002,0,0,0.170733605754134,0.972426868273176,0.209613162627982,0.735374033800057,1.55572709461131,1.03017528619447,0.64183841918363,0.758091635291392,0.25347929989024,0.188626341386076,0.842773567228942,0.768301828858431,1.09127391015665,0.476293691283074,1.15884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0.685738504770831,1.24233064311536,0.238436189947321,0.872078499793971,0.188218760830661,0.761531471025089,0.182927972872773,0.526139422875686,0.950628796921032,0,0.237270036248348,1.18205378850676,0.409231043169689,0.929621047115796,0.771626443924566,3.2475375131933,1.16965804222704,1.93383948643468,1.14772999241306,0.220591419119515,0 | ||
|short_description=p1@Nr4a3 | |short_description=p1@Nr4a3 | ||
}} | }} |
Latest revision as of 01:41, 27 September 2015
Short description: | p1@Nr4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nr4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 22bp_to_ENSMUST00000030025_5end |
EntrezGene: | Nr4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 9.13e-12 | 34 |
cerebral cortex | 8.87e-11 | 21 |
cerebral hemisphere | 8.87e-11 | 21 |
pallium | 8.87e-11 | 21 |
brain grey matter | 8.46e-10 | 29 |
regional part of telencephalon | 8.46e-10 | 29 |
telencephalon | 8.46e-10 | 29 |
regional part of nervous system | 1.12e-09 | 54 |
neural tube | 1.70e-08 | 52 |
neural rod | 1.70e-08 | 52 |
future spinal cord | 1.70e-08 | 52 |
neural keel | 1.70e-08 | 52 |
regional part of cerebral cortex | 2.54e-08 | 17 |
occipital lobe | 3.09e-08 | 10 |
visual cortex | 3.09e-08 | 10 |
neocortex | 3.09e-08 | 10 |
anterior neural tube | 4.05e-08 | 40 |
regional part of forebrain | 6.41e-08 | 39 |
forebrain | 6.41e-08 | 39 |
future forebrain | 6.41e-08 | 39 |
brain | 9.66e-08 | 47 |
future brain | 9.66e-08 | 47 |
regional part of brain | 3.70e-07 | 46 |
nervous system | 8.62e-07 | 75 |