Personal tools

FFCP PHASE1:Mm9::chr5:118291893..118291934,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18125
|EntrezGene=18125
|HGNC=
|HGNC=
|MCL_coexpression_id=114
|TSSclassifier=NA
|UniProt=Q9Z0J4
|UniProt=Q9Z0J4
|association_with_transcript=-218bp_to_ENSMUST00000142742_5end
|association_with_transcript=-218bp_to_ENSMUST00000142742_5end
|cluster_id=chr5:118291893..118291934,+
|description=CAGE_peak_1_at_Nos1_5end
|description=CAGE_peak_1_at_Nos1_5end
|id=chr5:118291893..118291934,+
|id=chr5:118291893..118291934,+
|ontology_enrichment_celltype=CL:0000540!5.38e-19!33;CL:0000047!5.38e-19!33;CL:0000031!5.38e-19!33;CL:0000404!5.38e-19!33;CL:0000393!1.07e-13!39;CL:0000211!1.07e-13!39;CL:0000117!1.23e-12!23;CL:0000337!1.23e-12!23;CL:0002319!8.00e-12!43;CL:0000221!3.14e-11!44;CL:0000133!3.14e-11!44;CL:0000107!8.08e-09!9;CL:0000055!2.90e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,8.40e-24,33;CL:0000047,8.40e-24,33;CL:0000031,8.40e-24,33;CL:0000404,8.40e-24,33;CL:0000393,3.18e-18,39;CL:0000211,3.18e-18,39;CL:0000117,1.57e-15,23;CL:0000337,1.57e-15,23;CL:0002319,2.04e-15,43;CL:0000221,8.45e-15,44;CL:0000133,8.45e-15,44;CL:0000107,1.03e-10,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.78e-22!73;UBERON:0005743!1.78e-22!73;UBERON:0000073!3.70e-21!75;UBERON:0001016!3.70e-21!75;UBERON:0002020!3.61e-15!34;UBERON:0001049!8.44e-15!52;UBERON:0005068!8.44e-15!52;UBERON:0006241!8.44e-15!52;UBERON:0007135!8.44e-15!52;UBERON:0004121!2.55e-14!102;UBERON:0000924!2.55e-14!102;UBERON:0006601!2.55e-14!102;UBERON:0000955!4.90e-14!50;UBERON:0006238!4.90e-14!50;UBERON:0002616!2.27e-13!49;UBERON:0002346!2.97e-13!71;UBERON:0003075!2.97e-13!71;UBERON:0007284!2.97e-13!71;UBERON:0002791!1.31e-12!29;UBERON:0003528!1.31e-12!29;UBERON:0001893!1.31e-12!29;UBERON:0003080!2.30e-10!40;UBERON:0000033!2.57e-10!63;UBERON:0002780!9.98e-10!39;UBERON:0001890!9.98e-10!39;UBERON:0006240!9.98e-10!39;UBERON:0002410!8.08e-09!9;UBERON:0000956!1.51e-08!21;UBERON:0001869!1.51e-08!21;UBERON:0000203!1.51e-08!21;UBERON:0003056!1.07e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-27,73;UBERON:0001016,3.22e-26,75;UBERON:0000073,2.49e-18,54;UBERON:0002020,3.44e-18,34;UBERON:0004121,2.91e-17,95;UBERON:0000924,2.91e-17,95;UBERON:0006601,2.91e-17,95;UBERON:0001049,5.43e-17,52;UBERON:0005068,5.43e-17,52;UBERON:0006241,5.43e-17,52;UBERON:0007135,5.43e-17,52;UBERON:0002346,1.09e-15,64;UBERON:0003075,1.09e-15,64;UBERON:0007284,1.09e-15,64;UBERON:0003528,5.62e-15,29;UBERON:0002791,5.62e-15,29;UBERON:0001893,5.62e-15,29;UBERON:0000955,3.69e-14,47;UBERON:0006238,3.69e-14,47;UBERON:0002616,2.26e-13,46;UBERON:0003080,4.56e-12,40;UBERON:0010371,5.63e-12,73;UBERON:0002780,2.80e-11,39;UBERON:0001890,2.80e-11,39;UBERON:0006240,2.80e-11,39;UBERON:0011216,5.33e-11,194;UBERON:0002410,1.03e-10,9;UBERON:0000956,6.76e-10,21;UBERON:0001869,6.76e-10,21;UBERON:0000203,6.76e-10,21;UBERON:0003056,9.13e-09,49;UBERON:0000010,3.77e-08,11;UBERON:0002619,5.33e-07,17;UBERON:0010314,7.90e-07,92
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,7.93486468908049,3.80298842103708,0,0,0,0,0,0,0,6.42875596312561,10.1254453748768,7.15104868594699,3.99911378165325,4.8591079009355,3.30725157880376,3.1629005436018,2.75765635983006,7.70811166995721,3.06449611404451,4.91540906419979,1.31886287730194,1.64677758484337,3.64639359389732,8.93385596804419,5.06486349028512,7.94550888439413,7.36571463684169,5.12538050876771,2.23679334990361,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,3.72783522436244,4.9772735491963,4.1889341362691,0.255457055208591,0,0,0,11.6836698735762,19.6725259212009,8.54449594367478,6.60532416730651,6.39288643325826,8.93488591606108,8.76102820565891,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,1.55222022443409,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.57043814830858,5.65975368086064,0,0.264450566663544,1.06644125267617,0.696710015581316,1.54640953586512,4.84040459096022,5.78182913996663,4.75564065281398,0.949058123089023,4.11747386810027,9.29940272560997,7.56034593756373,7.60359939764569,2.69645822596266,2.37751854862164,3.18626037206988,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.37156238974363,7.03270119553219,0,0,140.401157640234,135.87268301523,293.406667712072,71.9296081837182,109.171350300373,109.267540884489,94.7257041919253,203.702332964184,177.879500075936,9.96096080907602,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,1.84461088766356,0.775284879504663,0.363533729477506,0,1.8962205476149,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0,0,0,0.21183207086382,7.71849393192367,0,0.161464426695906,0,0,0,2.91480836629851,4.45020724825223,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,4.47302827679067,6.91234181259528,8.15444354456428,10.2630404960703,9.17077555416781,10.0010681427656,2.6175594198403,4.92536898508813,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,2.70465431645067,0,0,1.07184189539533,0,6.21227026878773,6.44455331110048,3.43737308063638,4.1244763762485,0.685082519770642,3.0215755895588,4.72515750162264,3.60256962579376,2.26571204492102,3.10656187051092,0.415149390336707,0,0.512200817262403,0.972426868273176,1.04806581313991,1.47074806760011,2.22246727801615,1.85431551515005,1.92551525755089,2.02157769411038,2.5347929989024,1.69763707247469,1.12369808963859,1.72867911493147,0.918967503289812,1.42888107384922,2.0859178670074,0.964546102318525,1.64834360321323,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,2.0348498328526,1.41164070622996,1.35383372626682,1.82927972872773,1.05227884575137,2.03706170768793,2.80571135828869,1.06771516311757,1.67457620038458,0.409231043169689,0.929621047115796,1.92906610981141,2.24829520144151,2.10538447600868,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,7.93486468908049,3.80298842103708,0,0,0,0,0,0,0,6.42875596312561,10.1254453748768,7.15104868594699,3.99911378165325,4.8591079009355,3.30725157880376,3.1629005436018,2.75765635983006,7.70811166995721,3.06449611404451,4.91540906419979,1.31886287730194,1.64677758484337,3.64639359389732,8.93385596804419,5.06486349028512,7.94550888439413,7.36571463684169,5.12538050876771,2.23679334990361,0,0,0,0,0.679971333707751,0,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.608930956624282,0.461230994512117,0.452167921657868,0.23517741427141,0,0,0,0,0,0,0,3.72783522436244,4.9772735491963,4.1889341362691,0.255457055208591,0,0,0,11.6836698735762,19.6725259212009,8.54449594367478,6.60532416730651,6.39288643325826,8.93488591606108,8.76102820565891,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0,0,1.55222022443409,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.57043814830858,5.65975368086064,0,0.264450566663544,1.06644125267617,0.696710015581316,1.54640953586512,4.84040459096022,5.78182913996663,4.75564065281398,0.949058123089023,4.11747386810027,9.29940272560997,7.56034593756373,7.60359939764569,2.69645822596266,2.37751854862164,3.18626037206988,0.379335801906163,0,0,0,0,0.0701358198903186,0,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,3.37156238974363,7.03270119553219,0,0,140.401157640234,135.87268301523,293.406667712072,71.9296081837182,109.171350300373,109.267540884489,94.7257041919253,203.702332964184,177.879500075936,9.96096080907602,0,0.35613120733451,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,1.84461088766356,0.775284879504663,0.363533729477506,0,1.8962205476149,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0,0,0,0.21183207086382,7.71849393192367,0,0.161464426695906,0,0,0,2.91480836629851,4.45020724825223,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,4.47302827679067,6.91234181259528,8.15444354456428,10.2630404960703,9.17077555416781,10.0010681427656,2.6175594198403,4.92536898508813,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,2.70465431645067,0,0,1.07184189539533,0,6.21227026878773,6.44455331110048,3.43737308063638,4.1244763762485,0.685082519770642,3.0215755895588,4.72515750162264,3.60256962579376,2.26571204492102,3.10656187051092,0.415149390336707,0,0.512200817262403,0.972426868273176,1.04806581313991,1.47074806760011,2.22246727801615,1.85431551515005,1.92551525755089,2.02157769411038,2.5347929989024,1.69763707247469,1.12369808963859,1.72867911493147,0.918967503289812,1.42888107384922,2.0859178670074,0.964546102318525,1.64834360321323,1.91358596174717,1.37147700954166,1.4198064492747,1.66905332963125,2.0348498328526,1.41164070622996,1.35383372626682,1.82927972872773,1.05227884575137,2.03706170768793,2.80571135828869,1.06771516311757,1.67457620038458,0.409231043169689,0.929621047115796,1.92906610981141,2.24829520144151,2.10538447600868,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p1@Nos1
|short_description=p1@Nos1
}}
}}

Latest revision as of 18:20, 1 October 2015

Short description:p1@Nos1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nos1_5end
Coexpression cluster:MCL_coexpression_mm9:114
Association with transcript: -218bp_to_ENSMUST00000142742_5end
EntrezGene:Nos1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nos1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1140.40
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2135.87
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3293.41
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D771.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8109.17
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9109.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D494.73
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5203.70
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6177.88
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A910.00
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I14.93
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.69e-2773
nervous system3.22e-2675
regional part of nervous system2.49e-1854
gray matter3.44e-1834
ectoderm-derived structure2.91e-1795
ectoderm2.91e-1795
presumptive ectoderm2.91e-1795
neural tube5.43e-1752
neural rod5.43e-1752
future spinal cord5.43e-1752
neural keel5.43e-1752
neurectoderm1.09e-1564
neural plate1.09e-1564
presumptive neural plate1.09e-1564
brain grey matter5.62e-1529
regional part of telencephalon5.62e-1529
telencephalon5.62e-1529
brain3.69e-1447
future brain3.69e-1447
regional part of brain2.26e-1346
anterior neural tube4.56e-1240
ecto-epithelium5.63e-1273
regional part of forebrain2.80e-1139
forebrain2.80e-1139
future forebrain2.80e-1139
organ system subdivision5.33e-11194
autonomic nervous system1.03e-109
cerebral cortex6.76e-1021
cerebral hemisphere6.76e-1021
pallium6.76e-1021
pre-chordal neural plate9.13e-0949
peripheral nervous system3.77e-0811
regional part of cerebral cortex5.33e-0717
structure with developmental contribution from neural crest7.90e-0792
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:118291893..118291934,%2B&oldid=4315989"