FFCP PHASE1:Mm9::chr12:109793161..109793190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14026 | |EntrezGene=14026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=P70429,Q6PB99 | |UniProt=P70429,Q6PB99 | ||
|association_with_transcript=231bp_to_ENSMUST00000021689,ENSMUST00000077735,NM_001163394,NM_007965,uc007ozv.1,uc007ozw.1_5end | |association_with_transcript=231bp_to_ENSMUST00000021689,ENSMUST00000077735,NM_001163394,NM_007965,uc007ozv.1,uc007ozw.1_5end | ||
|cluster_id=chr12:109793161..109793190,+ | |||
|description=CAGE_peak_1_at_Evl_5end | |description=CAGE_peak_1_at_Evl_5end | ||
|id=chr12:109793161..109793190,+ | |id=chr12:109793161..109793190,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.75e-15!23;CL:0000337!2.75e-15!23;CL:0000540!3.69e-15!33;CL:0000047!3.69e-15!33;CL:0000031!3.69e-15!33;CL:0000404!3.69e-15!33;CL:0002319!2.03e-14!43;CL:0000221!2.17e-14!44;CL:0000133!2.17e-14!44;CL:0000393!2.86e-12!39;CL:0000211!2.86e-12!39;CL:0000055!1.59e-11!50 | |ontology_enrichment_celltype=CL:0000117!2.75e-15!23;CL:0000337!2.75e-15!23;CL:0000540!3.69e-15!33;CL:0000047!3.69e-15!33;CL:0000031!3.69e-15!33;CL:0000404!3.69e-15!33;CL:0002319!2.03e-14!43;CL:0000221!2.17e-14!44;CL:0000133!2.17e-14!44;CL:0000393!2.86e-12!39;CL:0000211!2.86e-12!39;CL:0000055!1.59e-11!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.42e-15,23;CL:0000337,2.42e-15,23;CL:0000540,3.25e-15,33;CL:0000047,3.25e-15,33;CL:0000031,3.25e-15,33;CL:0000404,3.25e-15,33;CL:0002319,1.80e-14,43;CL:0000221,1.93e-14,44;CL:0000133,1.93e-14,44;CL:0000393,2.59e-12,39;CL:0000211,2.59e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.02e-29!73;UBERON:0005743!2.02e-29!73;UBERON:0000073!1.31e-28!75;UBERON:0001016!1.31e-28!75;UBERON:0002346!2.17e-25!71;UBERON:0003075!2.17e-25!71;UBERON:0007284!2.17e-25!71;UBERON:0004121!3.49e-25!102;UBERON:0000924!3.49e-25!102;UBERON:0006601!3.49e-25!102;UBERON:0001049!1.10e-23!52;UBERON:0005068!1.10e-23!52;UBERON:0006241!1.10e-23!52;UBERON:0007135!1.10e-23!52;UBERON:0000033!8.40e-23!63;UBERON:0000955!3.65e-22!50;UBERON:0006238!3.65e-22!50;UBERON:0002616!1.44e-21!49;UBERON:0003056!6.87e-21!49;UBERON:0002020!1.14e-19!34;UBERON:0003080!3.90e-18!40;UBERON:0002780!1.24e-17!39;UBERON:0001890!1.24e-17!39;UBERON:0006240!1.24e-17!39;UBERON:0002791!2.43e-16!29;UBERON:0003528!2.43e-16!29;UBERON:0001893!2.43e-16!29;UBERON:0000153!5.17e-13!94;UBERON:0007811!2.56e-12!86;UBERON:0000956!1.52e-11!21;UBERON:0001869!1.52e-11!21;UBERON:0000203!1.52e-11!21;UBERON:0000468!2.88e-09!333;UBERON:0002619!3.34e-09!17;UBERON:0000025!1.62e-07!114;UBERON:0000922!2.32e-07!328;UBERON:0002021!6.52e-07!10;UBERON:0000411!6.52e-07!10;UBERON:0001950!6.52e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.02e-29!73;UBERON:0005743!2.02e-29!73;UBERON:0000073!1.31e-28!75;UBERON:0001016!1.31e-28!75;UBERON:0002346!2.17e-25!71;UBERON:0003075!2.17e-25!71;UBERON:0007284!2.17e-25!71;UBERON:0004121!3.49e-25!102;UBERON:0000924!3.49e-25!102;UBERON:0006601!3.49e-25!102;UBERON:0001049!1.10e-23!52;UBERON:0005068!1.10e-23!52;UBERON:0006241!1.10e-23!52;UBERON:0007135!1.10e-23!52;UBERON:0000033!8.40e-23!63;UBERON:0000955!3.65e-22!50;UBERON:0006238!3.65e-22!50;UBERON:0002616!1.44e-21!49;UBERON:0003056!6.87e-21!49;UBERON:0002020!1.14e-19!34;UBERON:0003080!3.90e-18!40;UBERON:0002780!1.24e-17!39;UBERON:0001890!1.24e-17!39;UBERON:0006240!1.24e-17!39;UBERON:0002791!2.43e-16!29;UBERON:0003528!2.43e-16!29;UBERON:0001893!2.43e-16!29;UBERON:0000153!5.17e-13!94;UBERON:0007811!2.56e-12!86;UBERON:0000956!1.52e-11!21;UBERON:0001869!1.52e-11!21;UBERON:0000203!1.52e-11!21;UBERON:0000468!2.88e-09!333;UBERON:0002619!3.34e-09!17;UBERON:0000025!1.62e-07!114;UBERON:0000922!2.32e-07!328;UBERON:0002021!6.52e-07!10;UBERON:0000411!6.52e-07!10;UBERON:0001950!6.52e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-29,73;UBERON:0001016,1.01e-28,75;UBERON:0002346,2.98e-27,64;UBERON:0003075,2.98e-27,64;UBERON:0007284,2.98e-27,64;UBERON:0004121,2.91e-26,95;UBERON:0000924,2.91e-26,95;UBERON:0006601,2.91e-26,95;UBERON:0000073,3.82e-25,54;UBERON:0001049,8.94e-24,52;UBERON:0005068,8.94e-24,52;UBERON:0006241,8.94e-24,52;UBERON:0007135,8.94e-24,52;UBERON:0010314,3.15e-23,92;UBERON:0010371,4.14e-23,73;UBERON:0003056,5.74e-21,49;UBERON:0000955,1.17e-20,47;UBERON:0006238,1.17e-20,47;UBERON:0002616,4.53e-20,46;UBERON:0002020,9.61e-20,34;UBERON:0003080,3.34e-18,40;UBERON:0002780,1.07e-17,39;UBERON:0001890,1.07e-17,39;UBERON:0006240,1.07e-17,39;UBERON:0003528,2.12e-16,29;UBERON:0002791,2.12e-16,29;UBERON:0001893,2.12e-16,29;UBERON:0000956,1.38e-11,21;UBERON:0001869,1.38e-11,21;UBERON:0000203,1.38e-11,21;UBERON:0002619,3.11e-09,17;UBERON:0000922,5.17e-08,320;UBERON:0000025,2.12e-07,114;UBERON:0002021,6.20e-07,10;UBERON:0000411,6.20e-07,10;UBERON:0001950,6.20e-07,10 | |||
|phase1_expression=10.7299727560212,0.348975407639361,0,0,0,0.503637815735669,1.63528848416868,0.387369970324729,0.422366166455,1.40438715793196,0.34243593645101,1.83475965689274,0.171200729931206,0.524522414513984,0,0,0,0,0,0,15.5629220976458,0,0.261199789138935,0,0,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,15.8481681015439,0.866554859253824,0.498703936075477,1.02084678131185,0,0,0,0,0,0,6.54663453473002,6.9950082541465,5.68994931701213,39.90195856175,12.6454590700659,11.2039953194581,11.8602238435313,10.6389680435276,17.2503077237966,0,0,0.336093799142464,7.20326420900652,6.30373567865265,5.67239301505187,237.924157970887,226.937130107702,239.588270525336,19.9918273920788,16.8966011261116,0.449949858640699,1.97773272513395,0.7104801149461,18.5752068521411,22.6688800139717,105.659714942339,114.350029766942,126.825951694883,112.832138839502,98.0656321825164,144.171670676001,131.49998623702,174.651569455904,38.540558349786,49.670374515138,47.4644187761792,259.420327965291,241.435891466759,214.616308669385,43.8317308432168,44.4582461925027,50.1178252707937,139.653949514519,116.887149936064,200.565803708023,6.36100023998746,9.06858721281426,5.2175607966302,1.72084775396277,0,0.539703191637817,0,0,2.52799956237153,2.55645483867087,2.85764605063156,4.24007489412408,13.5209682985613,7.69958864485907,20.3844191765317,7.11066703153331,2.16491041011214,1.26679932737549,1.01104889002957,3.4255163915718,1.29468941823586,6.38301197978747,13.8788261412909,11.2652226975492,10.3776973765226,11.1534754008941,10.2302175208063,7.91699525376955,2.47194967734374,1.3013942122792,1.76922110389975,10.676612096529,2.87093973998512,4.363877278217,3.72783522436244,34.8409148443741,37.281513812795,1.27728527604296,0,0,0.254140454146129,43.2894947879938,56.7300747495097,179.057451760832,53.0164176586443,61.3717097592793,42.5965491347098,42.0204871345492,13.4427960282417,4.22983700074316,2.52722758433675,10.5220927943237,22.1204753036596,29.4274693674845,39.7937306869822,32.1001261990073,37.147928536625,32.412771232067,38.6051105186083,23.8007101079894,20.6945273215529,22.5036235399705,26.9205219970842,24.3307262994608,14.7365042089567,13.9300866608867,10.7006710932131,14.3304672109315,0,0,0,14.9130556225561,9.38104239924385,12.064158117888,14.2046841351126,14.7573173810553,12.0328348052155,13.9520366850245,12.0723030629829,11.0927075248811,17.114224391002,11.6558899496158,13.4574223846121,13.5965988305559,10.9775057645525,10.6023070820694,40.7962500214407,92.0996280794596,0,2.11560453330835,17.9162130449597,19.043407092556,12.8867461322093,8.87407508342707,7.33847544688072,7.03834816616469,5.21981967698963,5.27036655116835,3.51869292320377,5.37182474511107,3.11942539390592,1.79763881730844,2.59365659849633,1.59313018603494,15.1734320762465,11.0821057231437,14.6520056375005,11.8117770150282,9.30971938404604,10.6606446233284,10.560501699751,4.28069429140846,3.45397201251025,4.19550357334122,0,5.00535317148282,2.35870794135844,3.14806957338795,2.43432145666204,0.964708639009667,1.52775511068852,0.575392274901621,0.486405680325106,1.92192989231657,1.43768206527355,2.23284568601102,1.24815069245824,2.02063102357689,0.538192240565737,0,2.58654466233247,21.7915123536057,14.6668478797823,10.6939404038369,10.7957514212711,12.8979818230198,13.3304438896168,9.36641509717434,11.8226358079643,13.730810758224,15.4671125597762,9.01248230936559,10.3610989119537,6.36455857758651,0,0,1.47529281905711,5.51873492609465,25.3669932180711,26.6070528564301,15.7377547561608,3.28212205365685,20.8235424814729,15.6175497718655,22.1886099664783,12.6653462914853,20.2746793414979,18.9661275628518,14.5731852602962,21.6269334854371,24.1125544547379,62.9789780186742,8.51640511249612,18.8749539887291,17.1031307321255,7.09371528781903,3.98235415019888,11.1679092631291,12.3952658355548,5.09233715340925,9.44966057218473,8.9156192903739,9.30341855405596,5.81653967164009,4.63446591900138,3.47640433729398,2.10837217149998,3.09406629744561,7.83011093233712,24.1281866001956,21.8616175592855,21.2193664681276,15.4286003268778,24.0797903762795,16.9485491220185,22.8348711835949,2.11204537257339,2.96564899209348,8.60060752414351,2.96795255294664,7.75029248140347,6.99629929166608,5.61050016814741,5.9090723908222,1.7488850197791,24.2907145633768,0.512612642393558,11.144890870014,7.03739204004904,1.31857919903284,0.683471138605126,1.14389086603261,0.169978429993855,0.279902904647316,0.552799895217695,4.77335309007557,19.6128316020304,16.2655573701479,12.0965981720417,12.3362094648537,12.0099410060398,9.97996163247673,6.77758336947755,4.71160695571253,2.72191443912765,0,13.5286305284206,11.8118071374743,10.5893433892542,13.2226808073952,13.432621641684,12.5027532863176,14.0828686374905,7.68205870579306,10.4859344425711,10.8712854371703,6.33666013767304,0.632022241256357,11.3526120562492,7.9087437016917,6.10627867995637,7.51912121803422,5.76175928865668,4.56742708175882,3.83992770653901,3.23092639834072,5.79171730577999,3.32726410951574,3.31356794515158,1.635601307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| ||
|short_description=p1@Evl | |short_description=p1@Evl | ||
}} | }} |
Latest revision as of 06:56, 26 September 2015
Short description: | p1@Evl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Evl_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 231bp_to_ENSMUST00000021689, ENSMUST00000077735, NM_001163394, NM_007965, uc007ozv.1, uc007ozw.1_5end |
EntrezGene: | Evl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.42e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-15 | 23 |
neuron | 3.25e-15 | 33 |
neuronal stem cell | 3.25e-15 | 33 |
neuroblast | 3.25e-15 | 33 |
electrically signaling cell | 3.25e-15 | 33 |
neural cell | 1.80e-14 | 43 |
ectodermal cell | 1.93e-14 | 44 |
neurectodermal cell | 1.93e-14 | 44 |
electrically responsive cell | 2.59e-12 | 39 |
electrically active cell | 2.59e-12 | 39 |