FFCP PHASE1:Mm9::chr12:109999733..109999746,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109999733..109999746,+ | |||
|description=CAGE_peak_at_chr12:109999733..109999746,+ | |description=CAGE_peak_at_chr12:109999733..109999746,+ | ||
|id=chr12:109999733..109999746,+ | |id=chr12:109999733..109999746,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.98e-09!12;CL:0000542!3.18e-08!13;CL:0000051!3.18e-08!13;CL:0000084!9.13e-08!11;CL:0000827!9.13e-08!11;CL:0000738!1.00e-07!17;CL:0002087!1.00e-07!17;CL:0002031!2.51e-07!25;CL:0000791!3.27e-07!9;CL:0000789!3.27e-07!9;CL:0002420!3.27e-07!9;CL:0002419!3.27e-07!9;CL:0000790!3.27e-07!9 | |ontology_enrichment_celltype=CL:0000838!4.98e-09!12;CL:0000542!3.18e-08!13;CL:0000051!3.18e-08!13;CL:0000084!9.13e-08!11;CL:0000827!9.13e-08!11;CL:0000738!1.00e-07!17;CL:0002087!1.00e-07!17;CL:0002031!2.51e-07!25;CL:0000791!3.27e-07!9;CL:0000789!3.27e-07!9;CL:0002420!3.27e-07!9;CL:0002419!3.27e-07!9;CL:0000790!3.27e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1;CL:0000355,1.79e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.26e-07!3;DOID:4045!1.26e-07!3 | |ontology_enrichment_disease=DOID:0060100!1.26e-07!3;DOID:4045!1.26e-07!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-30,3;DOID:4045,5.70e-30,3;DOID:0050686,2.24e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.94e-10!41;UBERON:0001004!6.51e-10!42;UBERON:0002370!3.05e-07!23;UBERON:0000974!3.05e-07!23;UBERON:0004807!3.05e-07!23;UBERON:0005058!3.05e-07!23;UBERON:0003351!3.05e-07!23;UBERON:0009113!3.05e-07!23;UBERON:0003295!3.05e-07!23;UBERON:0009722!3.05e-07!23;UBERON:0005562!3.05e-07!23;UBERON:0007690!3.05e-07!23;UBERON:0006562!7.51e-07!24;UBERON:0003408!7.51e-07!24;UBERON:0001557!7.51e-07!24;UBERON:0001042!7.51e-07!24;UBERON:0008814!7.51e-07!24;UBERON:0009145!7.51e-07!24 | |ontology_enrichment_uberon=UBERON:0000065!2.94e-10!41;UBERON:0001004!6.51e-10!42;UBERON:0002370!3.05e-07!23;UBERON:0000974!3.05e-07!23;UBERON:0004807!3.05e-07!23;UBERON:0005058!3.05e-07!23;UBERON:0003351!3.05e-07!23;UBERON:0009113!3.05e-07!23;UBERON:0003295!3.05e-07!23;UBERON:0009722!3.05e-07!23;UBERON:0005562!3.05e-07!23;UBERON:0007690!3.05e-07!23;UBERON:0006562!7.51e-07!24;UBERON:0003408!7.51e-07!24;UBERON:0001557!7.51e-07!24;UBERON:0001042!7.51e-07!24;UBERON:0008814!7.51e-07!24;UBERON:0009145!7.51e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1;UBERON:0000029,1.12e-10,1;UBERON:0001097,1.12e-10,1;UBERON:0003968,1.12e-10,1;UBERON:0001467,1.12e-10,1;UBERON:0001134,1.79e-10,9;UBERON:0002036,1.79e-10,9;UBERON:0002385,1.79e-10,9;UBERON:0000486,1.79e-10,9;UBERON:0007503,1.79e-10,9;UBERON:0001015,1.79e-10,9;UBERON:0002329,1.79e-10,9;UBERON:0003082,1.79e-10,9;UBERON:0003059,1.79e-10,9;UBERON:0007282,1.79e-10,9;UBERON:0004290,1.79e-10,9;UBERON:0009618,1.79e-10,9;UBERON:0000383,1.73e-09,10;UBERON:0007524,1.11e-08,11;UBERON:0003077,1.11e-08,11;UBERON:0007285,1.11e-08,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.239316476986009,0.513602189793617,0,0,0,0,0,0.274228867211478,0.84877930359606,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5080499061085,25.7840663692854,9.42342739152837,139.41086266335,23.9065919735456,11.1667381197165,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0,0.171217968225505,0.239316476986009,0.513602189793617,0,0,0,0,0,0.274228867211478,0.84877930359606,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5080499061085,25.7840663692854,9.42342739152837,139.41086266335,23.9065919735456,11.1667381197165,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85539261585705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0,0.327726629431476,0.172684981865896,0.144649058581512,0,1.08781136763742,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:109999733..109999746,+ | |short_description=p@chr12:109999733..109999746,+ | ||
}} | }} |
Latest revision as of 16:35, 4 August 2015
Short description: | p@chr12:109999733..109999746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:109999733..109999746, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 5.74e-11 | 1 |
meso-epithelial cell | 5.74e-11 | 1 |
endothelial cell | 5.74e-11 | 1 |
endothelial cell of sinusoid | 5.74e-11 | 1 |
endothelial cell of hepatic sinusoid | 5.74e-11 | 1 |
multi-potent skeletal muscle stem cell | 1.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.74e-11 | 1 |
hepatic sinusoid | 5.74e-11 | 1 |
parenchyma | 5.74e-11 | 1 |
abdomen blood vessel | 5.74e-11 | 1 |
sinusoid | 5.74e-11 | 1 |
digestive system duct | 5.74e-11 | 1 |
abdominal segment blood vessel | 5.74e-11 | 1 |
trunk blood vessel | 5.74e-11 | 1 |
liver parenchyma | 5.74e-11 | 1 |
liver lobule | 5.74e-11 | 1 |
biliary system | 5.74e-11 | 1 |
biliary tree | 5.74e-11 | 1 |
biliary bud | 5.74e-11 | 1 |
hepatic duct | 5.74e-11 | 1 |
lymph node | 1.12e-10 | 1 |
axillary lymph node | 1.12e-10 | 1 |
peripheral lymph node | 1.12e-10 | 1 |
shoulder | 1.12e-10 | 1 |
skeletal muscle tissue | 1.79e-10 | 9 |
striated muscle tissue | 1.79e-10 | 9 |
muscle tissue | 1.79e-10 | 9 |
multilaminar epithelium | 1.79e-10 | 9 |
epithelial vesicle | 1.79e-10 | 9 |
musculature | 1.79e-10 | 9 |
somite | 1.79e-10 | 9 |
myotome | 1.79e-10 | 9 |
presomitic mesoderm | 1.79e-10 | 9 |
presumptive segmental plate | 1.79e-10 | 9 |
dermomyotome | 1.79e-10 | 9 |
trunk paraxial mesoderm | 1.79e-10 | 9 |
musculature of body | 1.73e-09 | 10 |
dense mesenchyme tissue | 1.11e-08 | 11 |
paraxial mesoderm | 1.11e-08 | 11 |
presumptive paraxial mesoderm | 1.11e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.70e-30 | 3 |
muscle cancer | 5.70e-30 | 3 |
organ system cancer | 2.24e-15 | 6 |