Personal tools

FFCP PHASE1:Mm9::chr13:43399487..43399499,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=328232
|EntrezGene=328232
|HGNC=
|HGNC=
|MCL_coexpression_id=1647
|TSSclassifier=NA
|UniProt=Q3UHD2
|UniProt=Q3UHD2
|association_with_transcript=41bp_to_ENSMUST00000055341,NM_001033399,uc007qfx.1,uc007qfy.1_5end
|association_with_transcript=41bp_to_ENSMUST00000055341,NM_001033399,uc007qfx.1,uc007qfy.1_5end
|cluster_id=chr13:43399487..43399499,-
|description=CAGE_peak_2_at_Gfod1_5end
|description=CAGE_peak_2_at_Gfod1_5end
|id=chr13:43399487..43399499,-
|id=chr13:43399487..43399499,-
|ontology_enrichment_celltype=CL:0000838!4.73e-07!12
|ontology_enrichment_celltype=CL:0000838!4.73e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000838,2.27e-12,12;CL:0000084,3.12e-11,11;CL:0000827,3.12e-11,11;CL:0000542,3.14e-11,13;CL:0000051,3.14e-11,13;CL:0000988,9.30e-10,32;CL:0002032,9.30e-10,32;CL:0000037,9.30e-10,32;CL:0000837,9.30e-10,32;CL:0000791,1.45e-08,9;CL:0000789,1.45e-08,9;CL:0002420,1.45e-08,9;CL:0002419,1.45e-08,9;CL:0000790,1.45e-08,9;CL:0000738,5.03e-08,17;CL:0002087,5.03e-08,17;CL:0000624,1.06e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002021!9.49e-07!10;UBERON:0000411!9.49e-07!10;UBERON:0001950!9.49e-07!10
|ontology_enrichment_uberon=UBERON:0002021!9.49e-07!10;UBERON:0000411!9.49e-07!10;UBERON:0001950!9.49e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.33e-12,10;UBERON:0000411,2.33e-12,10;UBERON:0001950,2.33e-12,10;UBERON:0001049,6.36e-10,52;UBERON:0005068,6.36e-10,52;UBERON:0006241,6.36e-10,52;UBERON:0007135,6.36e-10,52;UBERON:0000073,2.36e-09,54;UBERON:0002020,3.15e-09,34;UBERON:0000955,1.88e-08,47;UBERON:0006238,1.88e-08,47;UBERON:0002619,6.09e-08,17;UBERON:0003528,1.11e-07,29;UBERON:0002791,1.11e-07,29;UBERON:0001893,1.11e-07,29;UBERON:0002616,1.20e-07,46;UBERON:0002780,2.31e-07,39;UBERON:0001890,2.31e-07,39;UBERON:0006240,2.31e-07,39;UBERON:0000956,3.08e-07,21;UBERON:0001869,3.08e-07,21;UBERON:0000203,3.08e-07,21;UBERON:0003080,4.45e-07,40;UBERON:0002346,5.42e-07,64;UBERON:0003075,5.42e-07,64;UBERON:0007284,5.42e-07,64;UBERON:0001017,5.46e-07,73
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0,1.67860320474049,7.46180227403834,7.72412936862578,3.76679530096111,4.70655738072485,0.342401459862411,0.611942816932982,0,0,0,0.315462165358238,0.411343300817216,0,0.680346321208558,2.18440092641948,3.91799683708403,0.319984845586813,0.22940928106717,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,1.57057123192139,0,0.683045484958446,0.971020706062307,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0.439372365468944,0,0,0,1.67782606057736,2.90144856804538,1.00828139742739,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,1.14260393761521,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,0.893811366596314,0.921639199537461,0.263772575460388,0.274462930807229,0,2.23346399201105,0.56276261003168,1.68078072554491,0.294628585473668,1.13897344639282,0.559198337475902,0.151452386666368,0.151143120213571,1.73918693221007,0,0.679971333707751,0,0,0,0.561777680527007,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0,0.884610551949874,0.323533699894818,0,0.484875253135222,0,3.22058876712702,4.81727425670947,0.255457055208591,5.51149572727233,5.39912457894067,3.43089613097275,0.748953197024114,1.37250180845588,0.376963056338593,1.56441888173049,2.55715457330331,1.0389402227978,1.29793010454206,0.203678727700633,0.746441823660558,0,0.841767423545896,0.520481771850815,0.229902104433473,0,0.452114453507145,0.136072998302656,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,1.40442637462647,2.57347907114715,2.55747149456033,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0.462801338662135,0.465067889500816,0.536546802799238,1.40118410840603,0.658239399653922,0.492502392237286,1.62137619091711,1.90059983652932,1.97595103761946,1.61047702512446,1.89260953707715,0.308713837137853,0.660837565967596,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0.350679099451593,0.316182685621286,0,0,0,0,0,0,0,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0.234690248288502,0.670025029767263,0.714130922658041,0.975668239288994,0.472905432318573,0.44292937929755,0.637819074629948,0.81931657357869,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0.491804836130026,1.51482556322624,0,0,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,2.89189184779626,0.141940085208269,0,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,1.2178597964584,0.938686832254841,0.21183207086382,0.441056796109924,0.32977250588296,0.807322133479528,0.603129249281559,0.835606408021955,0.328281799490123,0.582961673259701,2.03967832211561,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,7.30907248973578,5.03825228365169,6.08079884739465,0,0.158167996790568,0.203319467126849,0,0,0,0.539457385539283,0.41326727862668,0.523511883968059,0.388844919875379,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.51968329191118,0,0,0.480781798079875,0.590758108698309,0.100966449948148,0.457240839929999,0.403304740547362,0.0974578807397524,0.384847366561318,0.701261413089414,0.226730383615211,0,0.179427713218951,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,4.14292712856459,3.43737308063638,1.71853182343688,4.11049511862385,4.5323633843382,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,0,0.666740183404846,0,0.962757628775446,1.01078884705519,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.526139422875686,0,0.561142271657738,0.474540072496697,0.591026894253381,0,0.154936841185966,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0
|phase1_expression=0.640595388419176,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0,1.67860320474049,7.46180227403834,7.72412936862578,3.76679530096111,4.70655738072485,0.342401459862411,0.611942816932982,0,0,0,0.315462165358238,0.411343300817216,0,0.680346321208558,2.18440092641948,3.91799683708403,0.319984845586813,0.22940928106717,0,0.430761996159075,0,0.380046838912748,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,1.25559489221072,0.7813353445238,1.57057123192139,0,0.683045484958446,0.971020706062307,0.125896817975577,0.405507724878058,0.183546752161682,0,0,0.439372365468944,0,0,0,1.67782606057736,2.90144856804538,1.00828139742739,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,1.14260393761521,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,0.893811366596314,0.921639199537461,0.263772575460388,0.274462930807229,0,2.23346399201105,0.56276261003168,1.68078072554491,0.294628585473668,1.13897344639282,0.559198337475902,0.151452386666368,0.151143120213571,1.73918693221007,0,0.679971333707751,0,0,0,0.561777680527007,0,0.519572009205738,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0,0.884610551949874,0.323533699894818,0,0.484875253135222,0,3.22058876712702,4.81727425670947,0.255457055208591,5.51149572727233,5.39912457894067,3.43089613097275,0.748953197024114,1.37250180845588,0.376963056338593,1.56441888173049,2.55715457330331,1.0389402227978,1.29793010454206,0.203678727700633,0.746441823660558,0,0.841767423545896,0.520481771850815,0.229902104433473,0,0.452114453507145,0.136072998302656,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,1.40442637462647,2.57347907114715,2.55747149456033,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0.462801338662135,0.465067889500816,0.536546802799238,1.40118410840603,0.658239399653922,0.492502392237286,1.62137619091711,1.90059983652932,1.97595103761946,1.61047702512446,1.89260953707715,0.308713837137853,0.660837565967596,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.597423819763102,0,0,0,0,0,0.350679099451593,0.316182685621286,0,0,0,0,0,0,0,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0,1.29327233116623,0.189491411770485,0.162964976442026,0,0.234690248288502,0.670025029767263,0.714130922658041,0.975668239288994,0.472905432318573,0.44292937929755,0.637819074629948,0.81931657357869,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0.491804836130026,1.51482556322624,0,0,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,2.89189184779626,0.141940085208269,0,0.162886959353576,0.494910368917606,1.32745138339963,0,0,0,0,0,0,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0.680879211507576,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,1.2178597964584,0.938686832254841,0.21183207086382,0.441056796109924,0.32977250588296,0.807322133479528,0.603129249281559,0.835606408021955,0.328281799490123,0.582961673259701,2.03967832211561,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,7.30907248973578,5.03825228365169,6.08079884739465,0,0.158167996790568,0.203319467126849,0,0,0,0.539457385539283,0.41326727862668,0.523511883968059,0.388844919875379,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.410843828659309,0.51968329191118,0,0,0.480781798079875,0.590758108698309,0.100966449948148,0.457240839929999,0.403304740547362,0.0974578807397524,0.384847366561318,0.701261413089414,0.226730383615211,0,0.179427713218951,0.335769232728157,0,0.375364950902364,0.183151624267265,0.214368379079066,1.00314420807073,0.564751842617067,4.14292712856459,3.43737308063638,1.71853182343688,4.11049511862385,4.5323633843382,1.35004500046361,4.05289082901798,2.26571204492102,2.07104124700728,0,0,0,0.729320151204882,0.209613162627982,0,0.666740183404846,0,0.962757628775446,1.01078884705519,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0.532427418478012,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.526139422875686,0,0.561142271657738,0.474540072496697,0.591026894253381,0,0.154936841185966,0.385813221962283,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0
|short_description=p2@Gfod1
|short_description=p2@Gfod1
}}
}}

Latest revision as of 15:19, 1 October 2015

Short description:p2@Gfod1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gfod1_5end
Coexpression cluster:MCL_coexpression_mm9:1647
Association with transcript: 41bp_to_ENSMUST00000055341, NM_001033399, uc007qfx.1, uc007qfy.1_5end
EntrezGene:Gfod1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gfod1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.08
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe2.33e-1210
visual cortex2.33e-1210
neocortex2.33e-1210
neural tube6.36e-1052
neural rod6.36e-1052
future spinal cord6.36e-1052
neural keel6.36e-1052
regional part of nervous system2.36e-0954
gray matter3.15e-0934
brain1.88e-0847
future brain1.88e-0847
regional part of cerebral cortex6.09e-0817
brain grey matter1.11e-0729
regional part of telencephalon1.11e-0729
telencephalon1.11e-0729
regional part of brain1.20e-0746
regional part of forebrain2.31e-0739
forebrain2.31e-0739
future forebrain2.31e-0739
cerebral cortex3.08e-0721
cerebral hemisphere3.08e-0721
pallium3.08e-0721
anterior neural tube4.45e-0740
neurectoderm5.42e-0764
neural plate5.42e-0764
presumptive neural plate5.42e-0764
central nervous system5.46e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:43399487..43399499,-&oldid=4309142"