FFCP PHASE1:Mm9::chr4:130488373..130488470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=521 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:130488373..130488470,+ | |||
|description=CAGE_peak_at_chr4:130488373..130488470,+ | |description=CAGE_peak_at_chr4:130488373..130488470,+ | ||
|id=chr4:130488373..130488470,+ | |id=chr4:130488373..130488470,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.94e-09!32;CL:0002032!1.94e-09!32;CL:0000037!1.94e-09!32;CL:0000566!1.94e-09!32;CL:0000837!1.94e-09!32;CL:0000838!3.62e-08!12;CL:0000542!1.20e-07!13;CL:0000051!1.20e-07!13;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11;CL:0002031!5.18e-07!25;CL:0000738!9.84e-07!17;CL:0002087!9.84e-07!17 | |ontology_enrichment_celltype=CL:0000988!1.94e-09!32;CL:0002032!1.94e-09!32;CL:0000037!1.94e-09!32;CL:0000566!1.94e-09!32;CL:0000837!1.94e-09!32;CL:0000838!3.62e-08!12;CL:0000542!1.20e-07!13;CL:0000051!1.20e-07!13;CL:0000084!1.89e-07!11;CL:0000827!1.89e-07!11;CL:0002031!5.18e-07!25;CL:0000738!9.84e-07!17;CL:0002087!9.84e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.59e-14,32;CL:0002032,2.59e-14,32;CL:0000037,2.59e-14,32;CL:0000837,2.59e-14,32;CL:0002031,3.21e-11,25;CL:0000838,9.62e-11,12;CL:0000084,9.46e-10,11;CL:0000827,9.46e-10,11;CL:0000542,1.46e-09,13;CL:0000051,1.46e-09,13;CL:0000738,2.66e-09,17;CL:0002087,2.66e-09,17;CL:0000791,2.46e-08,9;CL:0000789,2.46e-08,9;CL:0002420,2.46e-08,9;CL:0002419,2.46e-08,9;CL:0000790,2.46e-08,9;CL:0000624,1.87e-07,8;CL:0002320,4.26e-07,46;CL:0000134,4.26e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.38e-14!48;UBERON:0002405!1.25e-13!70;UBERON:0002390!5.78e-13!45;UBERON:0003061!5.78e-13!45;UBERON:0004177!4.27e-11!29;UBERON:0005057!7.90e-10!51;UBERON:0003408!1.38e-08!24;UBERON:0006562!1.93e-08!24;UBERON:0001557!1.93e-08!24;UBERON:0001042!1.93e-08!24;UBERON:0008814!1.93e-08!24;UBERON:0009145!1.93e-08!24;UBERON:0001004!2.45e-08!42;UBERON:0002370!2.60e-08!23;UBERON:0000974!2.60e-08!23;UBERON:0004807!2.60e-08!23;UBERON:0005058!2.60e-08!23;UBERON:0003351!2.60e-08!23;UBERON:0009113!2.60e-08!23;UBERON:0003295!2.60e-08!23;UBERON:0009722!2.60e-08!23;UBERON:0005562!2.60e-08!23;UBERON:0007690!2.60e-08!23;UBERON:0000065!4.61e-08!41;UBERON:0001041!8.04e-08!92;UBERON:0000077!1.38e-07!97;UBERON:0003081!6.10e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.31e-21,48;UBERON:0002405,1.31e-21,48;UBERON:0002390,1.27e-19,45;UBERON:0003061,1.27e-19,45;UBERON:0004177,3.12e-16,29;UBERON:0005057,3.12e-16,29;UBERON:0000077,1.34e-13,35;UBERON:0003408,1.13e-12,24;UBERON:0006562,1.86e-12,24;UBERON:0001557,1.86e-12,24;UBERON:0001042,1.86e-12,24;UBERON:0008814,1.86e-12,24;UBERON:0009145,1.86e-12,24;UBERON:0002370,2.71e-12,23;UBERON:0000974,2.71e-12,23;UBERON:0004807,2.71e-12,23;UBERON:0005058,2.71e-12,23;UBERON:0003351,2.71e-12,23;UBERON:0009113,2.71e-12,23;UBERON:0003295,2.71e-12,23;UBERON:0009722,2.71e-12,23;UBERON:0005562,2.71e-12,23;UBERON:0007690,2.71e-12,23;UBERON:0001041,2.72e-11,80;UBERON:0001004,3.75e-11,42;UBERON:0000065,9.05e-11,41;UBERON:0003081,3.14e-10,87;UBERON:0000072,3.33e-10,27;UBERON:0005911,3.13e-08,69;UBERON:0004119,1.50e-07,118;UBERON:0000925,1.50e-07,118;UBERON:0006595,1.50e-07,118;UBERON:0001007,1.83e-07,116;UBERON:0001555,1.83e-07,116;UBERON:0007026,1.83e-07,116;UBERON:0007811,3.30e-07,36;UBERON:0002384,4.26e-07,46;UBERON:0000926,6.94e-07,120;UBERON:0004120,6.94e-07,120;UBERON:0006603,6.94e-07,120;UBERON:0003929,7.31e-07,55;UBERON:0004921,7.61e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,20.1432384568859,10.6999428835267,8.89445200023575,7.53359060192222,5.74359544766422,20.3728868618135,28.7613123958501,2.99798785634096,5.06188168474565,1.39912375625629,17.6658812600613,12.8887567589394,15.7024171165271,0.765389611359628,11.7163322417045,9.40319240900167,3.35984087866154,2.06468352960453,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,3.14114246384279,5.29408339227913,10.9287277593351,4.85510353031154,0,0,0,0,0,0,0,0,0,47.3146949082817,13.0565185562042,24.5348473373999,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0.284743361598206,0,0.681535739998656,0,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,43.2426265690777,1.63286352971307,0,0.608930956624282,0,0.301445281105245,0.940709657085638,0,0.247194967734374,1.01219549843938,7.96149496754887,3.23533699894818,12.8088080707028,8.24287930329878,0,0.585561594023094,0.209446706813455,1.53274233125155,15.6957813102756,2.99951365496704,11.690460890722,0.599162557619291,1.37250180845588,0,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0.407357455401265,4.22983700074316,0.758168275301024,1.26265113531884,0.390361328888111,0,0,0.60281927134286,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.11218899690239,1.0447564995665,0.61734640922383,0.199034266818493,9.12877143507205,5.66165395652373,8.80906848126337,0,0.234526059981096,0,0,0,0.617068451549513,0.232533944750408,0,0.700592054203017,0.329119699826961,1.31333971263276,0.486412857275134,0.292399974850665,1.3173006917463,0.536825675041487,0.630869845692382,0.308713837137853,1.32167513193519,0,0.426576501070468,0,0.38660238396628,0.403367049246685,1.77902435075896,0,0.474529061544512,0.329397909448022,1.75934646160189,1.39269530428806,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0.228497025219458,0,0,0.193952487167626,0.631222379012867,0.379419222745544,0.738050739898011,0.156998727841375,0.616985819609003,1.1858105083486,1.00107063429656,0.786235980452812,1.79889689907883,0.811440485554012,0.241177159752417,1.78238096246994,2.5892652370573,5.35046248357617,2.19649130550465,20.1275489138296,3.34926852901653,1.5601883655728,1.01031551178845,0.179397413521912,1.4473305640901,5.54259570499814,0,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0.714130922658041,1.75620283072019,3.15270288212382,3.5434350343804,4.62418829106713,5.89907932976657,6.04397436530635,3.7608755231193,16.5870412333199,28.2830955585729,1.47529281905711,1.10374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0.567760340833074,0.534196811001766,0.977321756121456,2.3095817216155,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0,0.329098041204242,0,1.87737366450968,0.21183207086382,0,1.48397627647332,1.13025098687134,0.663442174209714,0.835606408021955,0.328281799490123,1.7488850197791,0.927126510052548,9.22702756308404,2.06386867963222,5.18544676635193,8.4765805652111,17.0867784651281,13.2691340459783,25.1568076390906,19.8731062299594,16.0311969613132,0,0,0.813277868507395,0.540026704109006,0.627264888043406,0.87345025498471,0.404593039154462,0.826534557253359,0.785267825952089,1.16653475962614,1.86401793926078,0,0,0,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,28.441000856536,0.202725215290164,2.46506297195585,6.10627867995637,8.77230808770659,12.3182439964384,16.4667765842357,20.6765338044408,32.7131297831998,26.3675551026299,36.2974266492626,33.9153424974338,32.5196024744314,35.530578263197,1.13365191807606,1.10992976687032,0,0,0.386379188064381,2.43987218086537,2.56412273974171,1.07184189539533,1.00314420807073,1.12950368523413,0.460325236507177,2.86447756719698,1.20297227640581,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.170733605754134,1.45864030240976,0,0,1.55572709461131,0.412070114477788,0.962757628775446,0.252697211763798,1.2673964994512,0.565879024158229,0.561849044819294,0.576226371643824,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0,0.70990322463735,0.715308569841963,0.290692833264657,0.282328141245992,0.507687647350059,0.548783918618318,0,0.679020569229309,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.749431733813838,1.63752125911786,1.71896843238639,1.14772999241306,0.882365676478062,1.85494268496337 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,20.1432384568859,10.6999428835267,8.89445200023575,7.53359060192222,5.74359544766422,20.3728868618135,28.7613123958501,2.99798785634096,5.06188168474565,1.39912375625629,17.6658812600613,12.8887567589394,15.7024171165271,0.765389611359628,11.7163322417045,9.40319240900167,3.35984087866154,2.06468352960453,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,3.14114246384279,5.29408339227913,10.9287277593351,4.85510353031154,0,0,0,0,0,0,0,0,0,47.3146949082817,13.0565185562042,24.5348473373999,0,0,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0.284743361598206,0,0.681535739998656,0,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.02765491747154,43.2426265690777,1.63286352971307,0,0.608930956624282,0,0.301445281105245,0.940709657085638,0,0.247194967734374,1.01219549843938,7.96149496754887,3.23533699894818,12.8088080707028,8.24287930329878,0,0.585561594023094,0.209446706813455,1.53274233125155,15.6957813102756,2.99951365496704,11.690460890722,0.599162557619291,1.37250180845588,0,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0.407357455401265,4.22983700074316,0.758168275301024,1.26265113531884,0.390361328888111,0,0,0.60281927134286,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.11218899690239,1.0447564995665,0.61734640922383,0.199034266818493,9.12877143507205,5.66165395652373,8.80906848126337,0,0.234526059981096,0,0,0,0.617068451549513,0.232533944750408,0,0.700592054203017,0.329119699826961,1.31333971263276,0.486412857275134,0.292399974850665,1.3173006917463,0.536825675041487,0.630869845692382,0.308713837137853,1.32167513193519,0,0.426576501070468,0,0.38660238396628,0.403367049246685,1.77902435075896,0,0.474529061544512,0.329397909448022,1.75934646160189,1.39269530428806,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0.228497025219458,0,0,0.193952487167626,0.631222379012867,0.379419222745544,0.738050739898011,0.156998727841375,0.616985819609003,1.1858105083486,1.00107063429656,0.786235980452812,1.79889689907883,0.811440485554012,0.241177159752417,1.78238096246994,2.5892652370573,5.35046248357617,2.19649130550465,20.1275489138296,3.34926852901653,1.5601883655728,1.01031551178845,0.179397413521912,1.4473305640901,5.54259570499814,0,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0.714130922658041,1.75620283072019,3.15270288212382,3.5434350343804,4.62418829106713,5.89907932976657,6.04397436530635,3.7608755231193,16.5870412333199,28.2830955585729,1.47529281905711,1.10374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0.321321316421807,0.567760340833074,0.534196811001766,0.977321756121456,2.3095817216155,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,0,0.258717367565509,0.428674070063185,0.532020700926821,0,0.329098041204242,0,1.87737366450968,0.21183207086382,0,1.48397627647332,1.13025098687134,0.663442174209714,0.835606408021955,0.328281799490123,1.7488850197791,0.927126510052548,9.22702756308404,2.06386867963222,5.18544676635193,8.4765805652111,17.0867784651281,13.2691340459783,25.1568076390906,19.8731062299594,16.0311969613132,0,0,0.813277868507395,0.540026704109006,0.627264888043406,0.87345025498471,0.404593039154462,0.826534557253359,0.785267825952089,1.16653475962614,1.86401793926078,0,0,0,0,0,0.337912250981556,0.352071715937262,0.2604087696879,0.314578033277133,0.483168241652012,0.288030006257865,28.441000856536,0.202725215290164,2.46506297195585,6.10627867995637,8.77230808770659,12.3182439964384,16.4667765842357,20.6765338044408,32.7131297831998,26.3675551026299,36.2974266492626,33.9153424974338,32.5196024744314,35.530578263197,1.13365191807606,1.10992976687032,0,0,0.386379188064381,2.43987218086537,2.56412273974171,1.07184189539533,1.00314420807073,1.12950368523413,0.460325236507177,2.86447756719698,1.20297227640581,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0,0.170733605754134,1.45864030240976,0,0,1.55572709461131,0.412070114477788,0.962757628775446,0.252697211763798,1.2673964994512,0.565879024158229,0.561849044819294,0.576226371643824,0.34461281373368,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0,0.70990322463735,0.715308569841963,0.290692833264657,0.282328141245992,0.507687647350059,0.548783918618318,0,0.679020569229309,0,0.355905054372522,0.394017929502254,0,0.309873682371932,0.385813221962283,0.749431733813838,1.63752125911786,1.71896843238639,1.14772999241306,0.882365676478062,1.85494268496337 | ||
|short_description=p@chr4:130488373..130488470,+ | |short_description=p@chr4:130488373..130488470,+ | ||
}} | }} |
Latest revision as of 20:30, 4 August 2015
Short description: | p@chr4:130488373..130488470, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488373..130488470, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.59e-14 | 32 |
hematopoietic oligopotent progenitor cell | 2.59e-14 | 32 |
hematopoietic stem cell | 2.59e-14 | 32 |
hematopoietic multipotent progenitor cell | 2.59e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 3.21e-11 | 25 |
lymphoid lineage restricted progenitor cell | 9.62e-11 | 12 |
T cell | 9.46e-10 | 11 |
pro-T cell | 9.46e-10 | 11 |
lymphocyte | 1.46e-09 | 13 |
common lymphoid progenitor | 1.46e-09 | 13 |
leukocyte | 2.66e-09 | 17 |
nongranular leukocyte | 2.66e-09 | 17 |
mature alpha-beta T cell | 2.46e-08 | 9 |
alpha-beta T cell | 2.46e-08 | 9 |
immature T cell | 2.46e-08 | 9 |
mature T cell | 2.46e-08 | 9 |
immature alpha-beta T cell | 2.46e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.87e-07 | 8 |
connective tissue cell | 4.26e-07 | 46 |
mesenchymal cell | 4.26e-07 | 46 |