FFCP PHASE1:Mm9::chr4:130488471..130488527,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=521 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:130488471..130488527,+ | |||
|description=CAGE_peak_at_chr4:130488471..130488527,+ | |description=CAGE_peak_at_chr4:130488471..130488527,+ | ||
|id=chr4:130488471..130488527,+ | |id=chr4:130488471..130488527,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.61e-09!32;CL:0002032!3.61e-09!32;CL:0000037!3.61e-09!32;CL:0000566!3.61e-09!32;CL:0000837!3.61e-09!32;CL:0000838!6.85e-08!12;CL:0002031!1.27e-07!25;CL:0000084!3.51e-07!11;CL:0000827!3.51e-07!11 | |ontology_enrichment_celltype=CL:0000988!3.61e-09!32;CL:0002032!3.61e-09!32;CL:0000037!3.61e-09!32;CL:0000566!3.61e-09!32;CL:0000837!3.61e-09!32;CL:0000838!6.85e-08!12;CL:0002031!1.27e-07!25;CL:0000084!3.51e-07!11;CL:0000827!3.51e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.88e-15,32;CL:0002032,5.88e-15,32;CL:0000037,5.88e-15,32;CL:0000837,5.88e-15,32;CL:0002031,9.09e-13,25;CL:0000838,1.63e-11,12;CL:0000084,2.10e-10,11;CL:0000827,2.10e-10,11;CL:0000542,2.57e-10,13;CL:0000051,2.57e-10,13;CL:0000738,2.77e-10,17;CL:0002087,2.77e-10,17;CL:0000791,7.98e-09,9;CL:0000789,7.98e-09,9;CL:0002420,7.98e-09,9;CL:0002419,7.98e-09,9;CL:0000790,7.98e-09,9;CL:0002320,1.20e-08,46;CL:0000134,1.20e-08,46;CL:0000624,7.88e-08,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.16e-18!48;UBERON:0002390!6.33e-17!45;UBERON:0003061!6.33e-17!45;UBERON:0002405!3.82e-15!70;UBERON:0004177!5.70e-12!29;UBERON:0003081!6.68e-11!88;UBERON:0003408!1.51e-09!24;UBERON:0002370!4.12e-09!23;UBERON:0000974!4.12e-09!23;UBERON:0004807!4.12e-09!23;UBERON:0005058!4.12e-09!23;UBERON:0003351!4.12e-09!23;UBERON:0009113!4.12e-09!23;UBERON:0003295!4.12e-09!23;UBERON:0009722!4.12e-09!23;UBERON:0005562!4.12e-09!23;UBERON:0007690!4.12e-09!23;UBERON:0005057!5.21e-09!51;UBERON:0006562!1.01e-08!24;UBERON:0001557!1.01e-08!24;UBERON:0001042!1.01e-08!24;UBERON:0008814!1.01e-08!24;UBERON:0009145!1.01e-08!24;UBERON:0001004!1.51e-08!42;UBERON:0000926!1.61e-08!193;UBERON:0004120!1.61e-08!193;UBERON:0006603!1.61e-08!193;UBERON:0000065!3.74e-08!41;UBERON:0001041!5.62e-07!92;UBERON:0000077!6.84e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.53e-26,48;UBERON:0002405,1.53e-26,48;UBERON:0002390,1.35e-25,45;UBERON:0003061,1.35e-25,45;UBERON:0004177,6.82e-20,29;UBERON:0005057,6.82e-20,29;UBERON:0003408,5.16e-16,24;UBERON:0002370,2.57e-15,23;UBERON:0000974,2.57e-15,23;UBERON:0004807,2.57e-15,23;UBERON:0005058,2.57e-15,23;UBERON:0003351,2.57e-15,23;UBERON:0009113,2.57e-15,23;UBERON:0003295,2.57e-15,23;UBERON:0009722,2.57e-15,23;UBERON:0005562,2.57e-15,23;UBERON:0007690,2.57e-15,23;UBERON:0000077,7.91e-15,35;UBERON:0001004,1.37e-14,42;UBERON:0006562,2.28e-14,24;UBERON:0001557,2.28e-14,24;UBERON:0001042,2.28e-14,24;UBERON:0008814,2.28e-14,24;UBERON:0009145,2.28e-14,24;UBERON:0000065,6.13e-14,41;UBERON:0001041,2.02e-13,80;UBERON:0003081,3.07e-13,87;UBERON:0000072,5.73e-12,27;UBERON:0005911,2.40e-09,69;UBERON:0000926,6.41e-09,120;UBERON:0004120,6.41e-09,120;UBERON:0006603,6.41e-09,120;UBERON:0002384,1.20e-08,46;UBERON:0001007,1.74e-08,116;UBERON:0001555,1.74e-08,116;UBERON:0007026,1.74e-08,116;UBERON:0004921,2.74e-08,114;UBERON:0007811,3.07e-08,36;UBERON:0004119,4.21e-08,118;UBERON:0000925,4.21e-08,118;UBERON:0006595,4.21e-08,118;UBERON:0001474,4.29e-08,22;UBERON:0004765,4.29e-08,22;UBERON:0001434,4.29e-08,22;UBERON:0003929,6.69e-07,55;UBERON:0002371,9.74e-07,16 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.1705789910408,5.06839399746,5.14941957908386,3.25314139628459,3.74929147278081,15.7504671536709,19.8444313491124,2.6648780945253,3.84703008040669,1.39912375625629,11.5143690355757,10.1464680868247,9.33657233955666,0.850432901510698,9.23405846168233,6.00759515019551,3.03985603307473,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.09265815368454,1.5626706890476,3.14114246384279,1.17646297606203,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,32.0464777570276,8.70434570413613,18.4851589528355,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0,0.384218305321555,0.311068836925433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0,0,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,32.1082975722493,0.742210695324124,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,1.15679485535929,6.19227386364912,1.61766849947409,11.4837589599405,7.27312879702833,0,0,0,1.02182822083437,10.7833612055328,0.599902730993408,6.86179226194549,0.299581278809645,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,4.60305791257344,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,1.02891068203972,0.199034266818493,7.72434506044558,3.08817488537658,5.68326998791185,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.934122738937356,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,0.939444931322602,0.210289948564127,0.102904612379284,1.65209391491899,0,0,0.232236671860439,0.128867461322093,1.21010114774006,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,2.69645822596266,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.196558995113203,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,1.15078454980324,2.7562988551756,2.74561413188081,10.0637744569148,1.86070473834252,1.87222603868736,0.505157755894224,0.358794827043824,0.482443521363367,5.91210208533135,0,0,0.509235257325564,0.234690248288502,1.17254380209271,0.714130922658041,1.17080188714679,2.67979744980525,1.99318220683897,3.50800491046472,5.07976275618788,6.04397436530635,4.77341893318988,12.0633027151418,27.7391898747542,1.96705709207614,1.10374698521893,0.321101179975584,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0,0.642642632843614,0.851640511249612,0.178065603667255,0.325773918707152,1.48473110675282,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,2.06271086496374,0.340439605753788,0,0,0,0.354680467284547,0,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.8244312647074,1.29171541356724,0.542816324353403,0.238744688006273,0.328281799490123,1.7488850197791,0.18542530201051,7.17657699350981,1.23832120777933,5.18544676635193,8.2882121082064,12.1657862671712,8.23601423543482,14.6181449794716,11.056164733569,9.81219814011409,2.86401185404534,0,0.203319467126849,0.324016022465404,0,0.655087691238533,0.539457385539283,0.661227645802687,0.785267825952089,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0,0.675824501963113,0.234714477291508,0.13020438484395,0.104859344425711,0,0.864090018773596,20.2247117202034,1.21635129174099,1.95150818613172,5.45667456506739,9.13036147904155,9.53670502950071,15.8657993366359,22.7441871848849,24.3329144375036,22.55721476988,24.5007629882522,29.0424484604462,30.7877893249054,28.8685948388475,0.226730383615211,0.665957860122194,0.0897138566094757,0.167884616364078,0.965947970160952,2.25218970541418,2.93042598827624,0.857473516316263,0,0,0,0.572895513439397,0.68741272937475,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,1.45864030240976,0,0,0,0.206035057238894,0,1.01078884705519,0.25347929989024,0.188626341386076,0.561849044819294,0.256100609619477,0.402048282689293,0.952587382566147,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.564656282491984,0.0846146078916765,0.548783918618318,0.526139422875686,0.135804113845862,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.749431733813838,0.935726433781634,1.93383948643468,1.14772999241306,1.10295709559758,0.927471342481686 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.1705789910408,5.06839399746,5.14941957908386,3.25314139628459,3.74929147278081,15.7504671536709,19.8444313491124,2.6648780945253,3.84703008040669,1.39912375625629,11.5143690355757,10.1464680868247,9.33657233955666,0.850432901510698,9.23405846168233,6.00759515019551,3.03985603307473,0.91763712426868,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.09265815368454,1.5626706890476,3.14114246384279,1.17646297606203,3.41522742479223,0.971020706062307,0,0,0,0,0,0,0,0,0,32.0464777570276,8.70434570413613,18.4851589528355,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0,0.384218305321555,0.311068836925433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589257170947335,0,0,0.075726193333184,0.0755715601067855,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.79928715803342,32.1082975722493,0.742210695324124,0.693941307064543,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,1.15679485535929,6.19227386364912,1.61766849947409,11.4837589599405,7.27312879702833,0,0,0,1.02182822083437,10.7833612055328,0.599902730993408,6.86179226194549,0.299581278809645,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,4.60305791257344,0.252722758433675,0.631325567659422,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,1.02891068203972,0.199034266818493,7.72434506044558,3.08817488537658,5.68326998791185,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.934122738937356,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,0.939444931322602,0.210289948564127,0.102904612379284,1.65209391491899,0,0,0.232236671860439,0.128867461322093,1.21010114774006,0.444756087689741,0.190225626112559,0.949058123089023,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,2.69645822596266,1.08069024937347,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.379419222745544,0,0.31399745568275,0.370191491765402,0,0.166845105716094,0.196558995113203,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,1.15078454980324,2.7562988551756,2.74561413188081,10.0637744569148,1.86070473834252,1.87222603868736,0.505157755894224,0.358794827043824,0.482443521363367,5.91210208533135,0,0,0.509235257325564,0.234690248288502,1.17254380209271,0.714130922658041,1.17080188714679,2.67979744980525,1.99318220683897,3.50800491046472,5.07976275618788,6.04397436530635,4.77341893318988,12.0633027151418,27.7391898747542,1.96705709207614,1.10374698521893,0.321101179975584,0.234423373184406,0,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0,0.642642632843614,0.851640511249612,0.178065603667255,0.325773918707152,1.48473110675282,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0,0,2.06271086496374,0.340439605753788,0,0,0,0.354680467284547,0,0.658196082408484,0,0.469343416127421,0,0.220528398054962,0.8244312647074,1.29171541356724,0.542816324353403,0.238744688006273,0.328281799490123,1.7488850197791,0.18542530201051,7.17657699350981,1.23832120777933,5.18544676635193,8.2882121082064,12.1657862671712,8.23601423543482,14.6181449794716,11.056164733569,9.81219814011409,2.86401185404534,0,0.203319467126849,0.324016022465404,0,0.655087691238533,0.539457385539283,0.661227645802687,0.785267825952089,1.16653475962614,4.97071450469541,0,0.149516546043979,0,0,0,0.675824501963113,0.234714477291508,0.13020438484395,0.104859344425711,0,0.864090018773596,20.2247117202034,1.21635129174099,1.95150818613172,5.45667456506739,9.13036147904155,9.53670502950071,15.8657993366359,22.7441871848849,24.3329144375036,22.55721476988,24.5007629882522,29.0424484604462,30.7877893249054,28.8685948388475,0.226730383615211,0.665957860122194,0.0897138566094757,0.167884616364078,0.965947970160952,2.25218970541418,2.93042598827624,0.857473516316263,0,0,0,0.572895513439397,0.68741272937475,0,1.5107877947794,0.675022500231806,0.45032120322422,0,0,0,0,0.170733605754134,1.45864030240976,0,0,0,0.206035057238894,0,1.01078884705519,0.25347929989024,0.188626341386076,0.561849044819294,0.256100609619477,0.402048282689293,0.952587382566147,0.579421629724277,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.564656282491984,0.0846146078916765,0.548783918618318,0.526139422875686,0.135804113845862,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.749431733813838,0.935726433781634,1.93383948643468,1.14772999241306,1.10295709559758,0.927471342481686 | ||
|short_description=p@chr4:130488471..130488527,+ | |short_description=p@chr4:130488471..130488527,+ | ||
}} | }} |
Latest revision as of 20:30, 4 August 2015
Short description: | p@chr4:130488471..130488527, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130488471..130488527, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.88e-15 | 32 |
hematopoietic oligopotent progenitor cell | 5.88e-15 | 32 |
hematopoietic stem cell | 5.88e-15 | 32 |
hematopoietic multipotent progenitor cell | 5.88e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 9.09e-13 | 25 |
lymphoid lineage restricted progenitor cell | 1.63e-11 | 12 |
T cell | 2.10e-10 | 11 |
pro-T cell | 2.10e-10 | 11 |
lymphocyte | 2.57e-10 | 13 |
common lymphoid progenitor | 2.57e-10 | 13 |
leukocyte | 2.77e-10 | 17 |
nongranular leukocyte | 2.77e-10 | 17 |
mature alpha-beta T cell | 7.98e-09 | 9 |
alpha-beta T cell | 7.98e-09 | 9 |
immature T cell | 7.98e-09 | 9 |
mature T cell | 7.98e-09 | 9 |
immature alpha-beta T cell | 7.98e-09 | 9 |
connective tissue cell | 1.20e-08 | 46 |
mesenchymal cell | 1.20e-08 | 46 |
CD4-positive, alpha-beta T cell | 7.88e-08 | 8 |