FFCP PHASE1:Mm9::chr7:107756426..107756506,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19346 | |EntrezGene=19346 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P35279 | |UniProt=P35279 | ||
|association_with_transcript=222bp_to_ENSMUST00000098252_5end | |association_with_transcript=222bp_to_ENSMUST00000098252_5end | ||
|cluster_id=chr7:107756426..107756506,+ | |||
|description=CAGE_peak_5_at_Rab6a_5end | |description=CAGE_peak_5_at_Rab6a_5end | ||
|id=chr7:107756426..107756506,+ | |id=chr7:107756426..107756506,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.52e-11!33;CL:0000047!4.52e-11!33;CL:0000031!4.52e-11!33;CL:0000404!4.52e-11!33;CL:0000393!3.55e-10!39;CL:0000211!3.55e-10!39;CL:0000117!2.62e-09!23;CL:0000337!2.62e-09!23;CL:0000221!3.65e-07!44;CL:0000133!3.65e-07!44;CL:0002319!5.93e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.06e-11,23;CL:0000337,5.06e-11,23;CL:0000540,1.69e-10,33;CL:0000047,1.69e-10,33;CL:0000031,1.69e-10,33;CL:0000404,1.69e-10,33;CL:0000393,1.62e-09,39;CL:0000211,1.62e-09,39;CL:0002319,3.49e-07,43;CL:0000221,6.13e-07,44;CL:0000133,6.13e-07,44;CL:0002610,9.06e-07,3;CL:0002614,9.06e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-15!73;UBERON:0005743!1.29e-15!73;UBERON:0000073!1.73e-15!75;UBERON:0001016!1.73e-15!75;UBERON:0002020!6.96e-13!34;UBERON:0001049!7.22e-13!52;UBERON:0005068!7.22e-13!52;UBERON:0006241!7.22e-13!52;UBERON:0007135!7.22e-13!52;UBERON:0000955!6.41e-12!50;UBERON:0006238!6.41e-12!50;UBERON:0002616!1.63e-11!49;UBERON:0004121!1.98e-10!102;UBERON:0000924!1.98e-10!102;UBERON:0006601!1.98e-10!102;UBERON:0002791!2.82e-10!29;UBERON:0003528!2.82e-10!29;UBERON:0001893!2.82e-10!29;UBERON:0000033!2.07e-09!63;UBERON:0003080!5.83e-09!40;UBERON:0002780!1.64e-08!39;UBERON:0001890!1.64e-08!39;UBERON:0006240!1.64e-08!39;UBERON:0002346!5.48e-08!71;UBERON:0003075!5.48e-08!71;UBERON:0007284!5.48e-08!71;UBERON:0000956!7.39e-07!21;UBERON:0001869!7.39e-07!21;UBERON:0000203!7.39e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.25e-20,54;UBERON:0001017,6.33e-20,73;UBERON:0001016,3.60e-19,75;UBERON:0001049,5.33e-18,52;UBERON:0005068,5.33e-18,52;UBERON:0006241,5.33e-18,52;UBERON:0007135,5.33e-18,52;UBERON:0002020,2.03e-17,34;UBERON:0004121,2.18e-13,95;UBERON:0000924,2.18e-13,95;UBERON:0006601,2.18e-13,95;UBERON:0002346,2.32e-13,64;UBERON:0003075,2.32e-13,64;UBERON:0007284,2.32e-13,64;UBERON:0002021,8.21e-12,10;UBERON:0000411,8.21e-12,10;UBERON:0001950,8.21e-12,10;UBERON:0002616,1.58e-11,46;UBERON:0003528,1.62e-11,29;UBERON:0002791,1.62e-11,29;UBERON:0001893,1.62e-11,29;UBERON:0000955,3.57e-11,47;UBERON:0006238,3.57e-11,47;UBERON:0010371,6.64e-11,73;UBERON:0003076,9.70e-11,12;UBERON:0003057,9.70e-11,12;UBERON:0002240,1.95e-10,6;UBERON:0005174,1.95e-10,6;UBERON:0001137,1.95e-10,6;UBERON:0003080,1.17e-09,40;UBERON:0002619,1.82e-09,17;UBERON:0002780,9.16e-09,39;UBERON:0001890,9.16e-09,39;UBERON:0006240,9.16e-09,39;UBERON:0001948,9.89e-09,5;UBERON:0002315,9.89e-09,5;UBERON:0010314,3.83e-08,92;UBERON:0002950,3.96e-08,4;UBERON:0001891,3.96e-08,4;UBERON:0009616,3.96e-08,4;UBERON:0010286,3.96e-08,4;UBERON:0000956,2.95e-07,21;UBERON:0001869,2.95e-07,21;UBERON:0000203,2.95e-07,21;UBERON:0003056,3.88e-07,49;UBERON:0002038,9.06e-07,3;UBERON:0009663,9.06e-07,3;UBERON:0009661,9.06e-07,3;UBERON:0000125,9.06e-07,3;UBERON:0002308,9.06e-07,3;UBERON:0004684,9.06e-07,3;UBERON:0002275,9.06e-07,3 | |||
|phase1_expression=0.320297694209588,2.09385244583617,0,2.11724947914781,2.00358291978539,0.33575854382378,0.700837921786577,0,0.140788722151667,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,19.6450000248971,0,0.261199789138935,0,0.91763712426868,0,0.86152399231815,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,1.21389876515759,0.528990979272033,0,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,0,0.622137673850866,0.810035629990144,0.841299845405528,2.28520787523043,1.32521124570968,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,2.68143409978894,1.84327839907492,0.791317726381163,0.365950574409639,2.08365348222704,2.51264699101243,2.8138130501584,2.13917546887534,1.76777151284201,1.85083185038834,1.3047961207771,0.302904773332736,0.226714680320357,0.869593466105033,0,0,0,0,0.896053774194671,2.66844398250329,0.340860645156116,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,2.05530983494308,0.258937883647172,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0.878342391034642,1.46612694769419,0,0.359445373517761,0,0,1.49790639404823,1.37250180845588,0.879580464790051,0.347648640384553,1.02286182932132,1.45451631191692,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.164167464079095,0,0.584799949701329,0,0.134206418760372,1.47202963994889,1.13195073617213,0,0.264450566663544,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0.216138049874694,0.597423819763102,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.590440591918409,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,3.01582567878545,0.54390568381871,0,0.551873492609465,2.24770825982909,1.75817529888305,0,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,1.33679204449436,1.13230612315533,0.809621403349789,1.75353514746787,0,0.963963949265421,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0.220528398054962,0.49465875882444,0.968786560175433,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,2.41052892613663,0.854354403989263,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0.621339313086926,129.649375897364,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0.629156066554265,42.7603893862031,52.9975211514472,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,2.92150409984269,4.11049511862385,6.0431511791176,4.05013500139084,0.900642406448441,0.453142408984205,2.07104124700728,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.666740183404846,0,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.765153328275374,0,0.927471342481686 | |phase1_expression=0.320297694209588,2.09385244583617,0,2.11724947914781,2.00358291978539,0.33575854382378,0.700837921786577,0,0.140788722151667,0.468129052643987,0,0.0797721589953364,0.171200729931206,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,19.6450000248971,0,0.261199789138935,0,0.91763712426868,0,0.86152399231815,0.430942465371778,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,1.57057123192139,1.17646297606203,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,1.54701627683233,1.21389876515759,0.528990979272033,0,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,0,0.622137673850866,0.810035629990144,0.841299845405528,2.28520787523043,1.32521124570968,0.489963196859816,0.479227355091182,0.919218786610021,4.40463523997555,2.68143409978894,1.84327839907492,0.791317726381163,0.365950574409639,2.08365348222704,2.51264699101243,2.8138130501584,2.13917546887534,1.76777151284201,1.85083185038834,1.3047961207771,0.302904773332736,0.226714680320357,0.869593466105033,0,0,0,0,0.896053774194671,2.66844398250329,0.340860645156116,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,2.05530983494308,0.258937883647172,0,0,0,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0.484875253135222,0,0.878342391034642,1.46612694769419,0,0.359445373517761,0,0,1.49790639404823,1.37250180845588,0.879580464790051,0.347648640384553,1.02286182932132,1.45451631191692,0.486723789203273,0.203678727700633,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0,0.23674473558521,0.393528463494808,0,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.164167464079095,0,0.584799949701329,0,0.134206418760372,1.47202963994889,1.13195073617213,0,0.264450566663544,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0.474529061544512,0.823494773620054,0.251335208800269,0.198956472041151,0.38992817423824,1.79763881730844,0.216138049874694,0.597423819763102,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.590440591918409,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.449724224769707,0.608580364165509,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,3.01582567878545,0.54390568381871,0,0.551873492609465,2.24770825982909,1.75817529888305,0,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.477937595905104,1.33679204449436,1.13230612315533,0.809621403349789,1.75353514746787,0,0.963963949265421,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.643011105094777,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0.21183207086382,0.220528398054962,0.49465875882444,0.968786560175433,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,2.41052892613663,0.854354403989263,0.206386867963223,0,0.188368457004691,0.27338845544205,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.247960367176008,0.26175594198403,0.129614973291793,0.621339313086926,129.649375897364,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.2604087696879,0.629156066554265,42.7603893862031,52.9975211514472,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.563047426353546,0.183151624267265,0.428736758158132,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,2.92150409984269,4.11049511862385,6.0431511791176,4.05013500139084,0.900642406448441,0.453142408984205,2.07104124700728,0.103787347584177,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.666740183404846,0,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.256100609619477,0.287177344778066,0,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.765153328275374,0,0.927471342481686 | ||
|short_description=p5@Rab6a | |short_description=p5@Rab6a | ||
}} | }} |
Latest revision as of 14:54, 25 September 2015
Short description: | p5@Rab6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rab6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 222bp_to_ENSMUST00000098252_5end |
EntrezGene: | Rab6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.06e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.06e-11 | 23 |
neuron | 1.69e-10 | 33 |
neuronal stem cell | 1.69e-10 | 33 |
neuroblast | 1.69e-10 | 33 |
electrically signaling cell | 1.69e-10 | 33 |
electrically responsive cell | 1.62e-09 | 39 |
electrically active cell | 1.62e-09 | 39 |
neural cell | 3.49e-07 | 43 |
ectodermal cell | 6.13e-07 | 44 |
neurectodermal cell | 6.13e-07 | 44 |
raphe nuclei neuron | 9.06e-07 | 3 |
neuron of the substantia nigra | 9.06e-07 | 3 |