FFCP PHASE1:Mm9::chr5:137395208..137395251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66752 | |EntrezGene=66752 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=192bp_to_ENSMUST00000137003,NR_015555,uc009abd.2_5end | |association_with_transcript=192bp_to_ENSMUST00000137003,NR_015555,uc009abd.2_5end | ||
|cluster_id=chr5:137395208..137395251,+ | |||
|description=CAGE_peak_2_at_4933404O12Rik_5end | |description=CAGE_peak_2_at_4933404O12Rik_5end | ||
|id=chr5:137395208..137395251,+ | |id=chr5:137395208..137395251,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.66e-15!44;CL:0000133!2.66e-15!44;CL:0000055!3.33e-15!50;CL:0002319!3.70e-15!43;CL:0000393!2.96e-14!39;CL:0000211!2.96e-14!39;CL:0000540!2.98e-13!33;CL:0000047!2.98e-13!33;CL:0000031!2.98e-13!33;CL:0000404!2.98e-13!33;CL:0002321!8.47e-13!70;CL:0000220!8.47e-13!70;CL:0000117!9.73e-10!23;CL:0000337!9.73e-10!23;CL:0000548!1.04e-08!115;CL:0000004!1.04e-08!115;CL:0000255!1.04e-08!115;CL:0000144!4.19e-08!121;CL:0000012!4.19e-08!121;CL:0002371!4.23e-08!118 | |ontology_enrichment_celltype=CL:0000221!2.66e-15!44;CL:0000133!2.66e-15!44;CL:0000055!3.33e-15!50;CL:0002319!3.70e-15!43;CL:0000393!2.96e-14!39;CL:0000211!2.96e-14!39;CL:0000540!2.98e-13!33;CL:0000047!2.98e-13!33;CL:0000031!2.98e-13!33;CL:0000404!2.98e-13!33;CL:0002321!8.47e-13!70;CL:0000220!8.47e-13!70;CL:0000117!9.73e-10!23;CL:0000337!9.73e-10!23;CL:0000548!1.04e-08!115;CL:0000004!1.04e-08!115;CL:0000255!1.04e-08!115;CL:0000144!4.19e-08!121;CL:0000012!4.19e-08!121;CL:0002371!4.23e-08!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.26e-17,44;CL:0000133,3.26e-17,44;CL:0002319,4.73e-17,43;CL:0002321,6.81e-16,70;CL:0000393,8.67e-16,39;CL:0000211,8.67e-16,39;CL:0000540,1.17e-14,33;CL:0000047,1.17e-14,33;CL:0000031,1.17e-14,33;CL:0000404,1.17e-14,33;CL:0000117,1.04e-10,23;CL:0000337,1.04e-10,23;CL:0000034,5.59e-09,97;CL:0000723,7.63e-09,91;CL:0000048,7.63e-09,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.24e-21!73;UBERON:0005743!2.24e-21!73;UBERON:0000073!6.12e-21!75;UBERON:0001016!6.12e-21!75;UBERON:0002020!2.54e-14!34;UBERON:0001049!1.38e-13!52;UBERON:0005068!1.38e-13!52;UBERON:0006241!1.38e-13!52;UBERON:0007135!1.38e-13!52;UBERON:0002791!2.13e-12!29;UBERON:0003528!2.13e-12!29;UBERON:0001893!2.13e-12!29;UBERON:0000955!5.96e-12!50;UBERON:0006238!5.96e-12!50;UBERON:0002616!1.08e-11!49;UBERON:0000956!1.27e-10!21;UBERON:0001869!1.27e-10!21;UBERON:0000203!1.27e-10!21;UBERON:0004121!1.42e-10!102;UBERON:0000924!1.42e-10!102;UBERON:0006601!1.42e-10!102;UBERON:0003080!1.51e-10!40;UBERON:0002780!1.88e-10!39;UBERON:0001890!1.88e-10!39;UBERON:0006240!1.88e-10!39;UBERON:0000033!1.27e-09!63;UBERON:0002346!7.80e-09!71;UBERON:0003075!7.80e-09!71;UBERON:0007284!7.80e-09!71;UBERON:0002619!1.95e-08!17;UBERON:0003056!2.27e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-24,73;UBERON:0001016,1.71e-23,75;UBERON:0004121,3.10e-16,95;UBERON:0000924,3.10e-16,95;UBERON:0006601,3.10e-16,95;UBERON:0002020,7.37e-16,34;UBERON:0000073,5.09e-15,54;UBERON:0001049,5.38e-15,52;UBERON:0005068,5.38e-15,52;UBERON:0006241,5.38e-15,52;UBERON:0007135,5.38e-15,52;UBERON:0002346,6.55e-14,64;UBERON:0003075,6.55e-14,64;UBERON:0007284,6.55e-14,64;UBERON:0003528,1.07e-13,29;UBERON:0002791,1.07e-13,29;UBERON:0001893,1.07e-13,29;UBERON:0000955,1.00e-12,47;UBERON:0006238,1.00e-12,47;UBERON:0002616,1.95e-12,46;UBERON:0003080,6.44e-12,40;UBERON:0002780,8.21e-12,39;UBERON:0001890,8.21e-12,39;UBERON:0006240,8.21e-12,39;UBERON:0000956,9.56e-12,21;UBERON:0001869,9.56e-12,21;UBERON:0000203,9.56e-12,21;UBERON:0010371,1.36e-10,73;UBERON:0003056,1.43e-09,49;UBERON:0002619,2.73e-09,17 | |||
|phase1_expression=1.28119077683835,1.74487703819681,1.36499771816861,2.41971369045464,3.00537437967808,2.18243053485457,2.33612640595526,1.93684985162364,0,1.63845168425395,0,11.8062795313098,0,2.18551006047494,0,0.607425802169478,0,0,0,0,26.3634199468316,1.09220046320974,0.261199789138935,3.03985603307473,2.98232065387321,4.59385571292016,0.430761996159075,3.66301095566011,1.33016393619462,2.77233142735924,1.55211357458713,12.7006134691926,15.9916844771988,0,0,0.332469290716985,0.204169356262369,0,1.5626706890476,0.523523743973798,0.588231488031014,0,0,3.77690453926732,2.73717714292689,4.22157529971868,2.34717403304412,6.75877984779384,3.51497892375155,2.13872888981712,4.33957907038624,2.87505128729943,0,0,0,1.28629718017973,4.58453503902011,1.03134418455488,5.46254444320914,15.340738398889,10.1413024560989,2.37191172448392,7.11435836888911,0.899899717281399,1.97773272513395,0.7104801149461,2.69640099466564,3.45796474789399,8.70992743391212,16.605730414798,15.3537221786509,5.99867067247988,5.30084498283872,11.7591167246356,8.91362880469598,17.4651569455904,4.40463523997555,1.53224805702225,1.22885226604995,7.51751840062105,13.8146341839639,11.9810075228055,2.79182999001381,0.56276261003168,1.68078072554491,1.47314292736834,4.12877874317399,10.6247684120421,0.227178579999552,4.23200736597999,0,0,2.03991400112325,3.2382191498269,0.649776417447669,0.896053774194671,11.0951091904084,12.2709832256202,8.3131521472918,8.48014978824817,1.97180787687353,11.5493829672886,5.09610479413291,7.11066703153331,0,0,0,6.39429726426736,0,0.29688427812965,0.346970653532272,0.304465478312141,1.15307748628029,0.150722640552623,0.117588707135705,0.125666591329675,0.494389935468748,0.433798070759735,0,0.485300549842228,0.662524555381181,0,0,0.878342391034642,1.67557365450764,0.510914110417183,1.7972268675888,2.99951365496704,1.39777249780371,1.64769703345305,3.20250421973039,3.26701315493447,3.82413504423008,4.34716277461562,1.45451631191692,2.10913641988085,0.305518091550949,0.995255764880744,0.252722758433675,0.420883711772948,0.520481771850815,1.14951052216736,1.0803727788321,0.753524089178575,1.29269348387523,2.562274405697,1.59292931751539,0,0.646703978798527,0.945530400839096,1.23165786914764,0.876782929710299,1.39023624612799,0.348252166522167,0.205782136407943,1.19420560091096,0.702213187313235,2.05878325691772,1.98914449576915,0.621377317606506,0.234526059981096,0.720248245844059,0.946978942340841,0.393528463494808,0.771335564436891,0.465067889500816,0.804820204198858,0.934122738937356,1.15191894939436,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,3.78521907415429,5.24813523134351,0.330418782983798,5.81791246659797,0.213288250535234,1.39342003116263,1.28867461322093,0.605050573870028,0.444756087689741,0.570676878337677,0.474529061544512,0.658795818896044,1.00534083520108,1.1937388322469,1.55971269695296,0.898819408654221,1.08069024937347,0.398282546508734,1.51734320762465,0.456994050438915,4.50830942692322,0.610953983535943,0.581857461502877,0.631222379012867,0.822074982615345,1.18088118383682,1.56998727841375,0.863780147452604,0.592905254174298,0.500535317148282,1.17935397067922,0.674586337154561,0.608580364165509,0.241177159752417,0,0,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,1.4351793081753,0.482443521363367,0.554259570499814,0.37898282354097,0.488894929326078,0.848725428875941,0.938760993154008,2.34508760418542,0.952174563544055,0.195133647857799,1.41871629695572,1.10732344824387,0.478364305972461,0.327726629431476,0,0.723245292907558,1.50791283939272,1.63171705145613,0.491764273019036,0.551873492609465,2.0871576698413,1.52375192569864,9.18035694109382,1.00988370881749,3.47059041357882,8.19921363022941,3.66219776145758,6.21318874676635,4.45597348164788,1.69845918473299,13.3587531552715,5.26060544240361,4.34816555741176,2.57057053137446,0.709700426041343,0.890328018336276,0.81443479676788,0.989820737835213,3.98235415019888,0.728341908464944,2.41858845571801,2.07465587731488,4.72483028609236,0.614870295887855,0.775284879504663,1.81766864738753,3.20847640546249,4.74055136903724,2.10837217149998,2.06271086496374,2.04263763452273,1.26042765821917,0.388076051348264,1.07168517515796,1.41872186913819,1.24858172321449,1.48094118541909,0.304464949114599,0,0.21183207086382,0.441056796109924,0.16488625294148,0.161464426695906,0.72375509913787,0.477489376012546,0.164140899745061,0.582961673259701,4.07935664423121,0.512612642393558,2.47664241555867,0.740778109478847,1.31857919903284,0.956859594047176,0.686334519619568,0.849892149969277,1.25956307091292,1.38199973804424,0,0.474503990371703,1.21991680276109,1.29606408986162,1.46361807210128,1.09181281873089,2.29269388854195,0.909188012978695,1.04702376793612,0.777689839750757,1.86401793926078,42.2769704013143,0.598066184175915,1.15820943319968,1.16670713006429,1.42075805825504,1.01373675294467,1.05621514781179,1.43224823328345,0.734015410979976,27.5405897741647,29.95512065081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| ||
|short_description=p2@4933404O12Rik | |short_description=p2@4933404O12Rik | ||
}} | }} |
Latest revision as of 14:14, 25 September 2015
Short description: | p2@4933404O12Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4933404O12Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 192bp_to_ENSMUST00000137003, NR_015555, uc009abd.2_5end |
EntrezGene: | 4933404O12Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.26e-17 | 44 |
neurectodermal cell | 3.26e-17 | 44 |
neural cell | 4.73e-17 | 43 |
embryonic cell | 6.81e-16 | 70 |
electrically responsive cell | 8.67e-16 | 39 |
electrically active cell | 8.67e-16 | 39 |
neuron | 1.17e-14 | 33 |
neuronal stem cell | 1.17e-14 | 33 |
neuroblast | 1.17e-14 | 33 |
electrically signaling cell | 1.17e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.04e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-10 | 23 |
stem cell | 5.59e-09 | 97 |
somatic stem cell | 7.63e-09 | 91 |
multi fate stem cell | 7.63e-09 | 91 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.49e-24 | 73 |
nervous system | 1.71e-23 | 75 |
ectoderm-derived structure | 3.10e-16 | 95 |
ectoderm | 3.10e-16 | 95 |
presumptive ectoderm | 3.10e-16 | 95 |
gray matter | 7.37e-16 | 34 |
regional part of nervous system | 5.09e-15 | 54 |
neural tube | 5.38e-15 | 52 |
neural rod | 5.38e-15 | 52 |
future spinal cord | 5.38e-15 | 52 |
neural keel | 5.38e-15 | 52 |
neurectoderm | 6.55e-14 | 64 |
neural plate | 6.55e-14 | 64 |
presumptive neural plate | 6.55e-14 | 64 |
brain grey matter | 1.07e-13 | 29 |
regional part of telencephalon | 1.07e-13 | 29 |
telencephalon | 1.07e-13 | 29 |
brain | 1.00e-12 | 47 |
future brain | 1.00e-12 | 47 |
regional part of brain | 1.95e-12 | 46 |
anterior neural tube | 6.44e-12 | 40 |
regional part of forebrain | 8.21e-12 | 39 |
forebrain | 8.21e-12 | 39 |
future forebrain | 8.21e-12 | 39 |
cerebral cortex | 9.56e-12 | 21 |
cerebral hemisphere | 9.56e-12 | 21 |
pallium | 9.56e-12 | 21 |
ecto-epithelium | 1.36e-10 | 73 |
pre-chordal neural plate | 1.43e-09 | 49 |
regional part of cerebral cortex | 2.73e-09 | 17 |