FFCP PHASE1:Mm9::chr15:85166667..85166708,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54138 | |EntrezGene=54138 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WGN7 | |UniProt=F8WGN7 | ||
|association_with_transcript=-59bp_to_ENSMUST00000016685_5end | |association_with_transcript=-59bp_to_ENSMUST00000016685_5end | ||
|cluster_id=chr15:85166667..85166708,+ | |||
|description=CAGE_peak_1_at_Atxn10_5end | |description=CAGE_peak_1_at_Atxn10_5end | ||
|id=chr15:85166667..85166708,+ | |id=chr15:85166667..85166708,+ | ||
|ontology_enrichment_celltype=CL:0000221!4.69e-18!44;CL:0000133!4.69e-18!44;CL:0002319!8.49e-18!43;CL:0000055!8.67e-18!50;CL:0000393!6.93e-17!39;CL:0000211!6.93e-17!39;CL:0000540!2.42e-16!33;CL:0000047!2.42e-16!33;CL:0000031!2.42e-16!33;CL:0000404!2.42e-16!33;CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0002321!1.04e-10!70;CL:0000220!1.04e-10!70 | |ontology_enrichment_celltype=CL:0000221!4.69e-18!44;CL:0000133!4.69e-18!44;CL:0002319!8.49e-18!43;CL:0000055!8.67e-18!50;CL:0000393!6.93e-17!39;CL:0000211!6.93e-17!39;CL:0000540!2.42e-16!33;CL:0000047!2.42e-16!33;CL:0000031!2.42e-16!33;CL:0000404!2.42e-16!33;CL:0000117!2.43e-14!23;CL:0000337!2.43e-14!23;CL:0002321!1.04e-10!70;CL:0000220!1.04e-10!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.69e-18,44;CL:0000133,4.69e-18,44;CL:0002319,8.49e-18,43;CL:0000393,6.93e-17,39;CL:0000211,6.93e-17,39;CL:0000540,2.42e-16,33;CL:0000047,2.42e-16,33;CL:0000031,2.42e-16,33;CL:0000404,2.42e-16,33;CL:0000117,2.43e-14,23;CL:0000337,2.43e-14,23;CL:0002321,1.04e-10,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.62e-33!73;UBERON:0005743!8.62e-33!73;UBERON:0000073!1.92e-31!75;UBERON:0001016!1.92e-31!75;UBERON:0001049!1.52e-24!52;UBERON:0005068!1.52e-24!52;UBERON:0006241!1.52e-24!52;UBERON:0007135!1.52e-24!52;UBERON:0002346!3.01e-24!71;UBERON:0003075!3.01e-24!71;UBERON:0007284!3.01e-24!71;UBERON:0004121!3.55e-24!102;UBERON:0000924!3.55e-24!102;UBERON:0006601!3.55e-24!102;UBERON:0000955!5.72e-23!50;UBERON:0006238!5.72e-23!50;UBERON:0002616!1.45e-22!49;UBERON:0000033!6.25e-22!63;UBERON:0003056!5.69e-19!49;UBERON:0003080!1.25e-18!40;UBERON:0002020!1.41e-18!34;UBERON:0002780!3.34e-18!39;UBERON:0001890!3.34e-18!39;UBERON:0006240!3.34e-18!39;UBERON:0002791!2.59e-15!29;UBERON:0003528!2.59e-15!29;UBERON:0001893!2.59e-15!29;UBERON:0007811!3.54e-14!86;UBERON:0000025!6.27e-14!114;UBERON:0000153!1.32e-13!94;UBERON:0004111!1.46e-12!122;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0000475!1.47e-09!200;UBERON:0002619!3.83e-09!17;UBERON:0000119!7.99e-07!183;UBERON:0000477!9.94e-07!154 | |ontology_enrichment_uberon=UBERON:0001017!8.62e-33!73;UBERON:0005743!8.62e-33!73;UBERON:0000073!1.92e-31!75;UBERON:0001016!1.92e-31!75;UBERON:0001049!1.52e-24!52;UBERON:0005068!1.52e-24!52;UBERON:0006241!1.52e-24!52;UBERON:0007135!1.52e-24!52;UBERON:0002346!3.01e-24!71;UBERON:0003075!3.01e-24!71;UBERON:0007284!3.01e-24!71;UBERON:0004121!3.55e-24!102;UBERON:0000924!3.55e-24!102;UBERON:0006601!3.55e-24!102;UBERON:0000955!5.72e-23!50;UBERON:0006238!5.72e-23!50;UBERON:0002616!1.45e-22!49;UBERON:0000033!6.25e-22!63;UBERON:0003056!5.69e-19!49;UBERON:0003080!1.25e-18!40;UBERON:0002020!1.41e-18!34;UBERON:0002780!3.34e-18!39;UBERON:0001890!3.34e-18!39;UBERON:0006240!3.34e-18!39;UBERON:0002791!2.59e-15!29;UBERON:0003528!2.59e-15!29;UBERON:0001893!2.59e-15!29;UBERON:0007811!3.54e-14!86;UBERON:0000025!6.27e-14!114;UBERON:0000153!1.32e-13!94;UBERON:0004111!1.46e-12!122;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0000475!1.47e-09!200;UBERON:0002619!3.83e-09!17;UBERON:0000119!7.99e-07!183;UBERON:0000477!9.94e-07!154 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.62e-33,73;UBERON:0001016,1.92e-31,75;UBERON:0000073,4.73e-26,54;UBERON:0002346,7.65e-26,64;UBERON:0003075,7.65e-26,64;UBERON:0007284,7.65e-26,64;UBERON:0004121,5.55e-25,95;UBERON:0000924,5.55e-25,95;UBERON:0006601,5.55e-25,95;UBERON:0001049,1.52e-24,52;UBERON:0005068,1.52e-24,52;UBERON:0006241,1.52e-24,52;UBERON:0007135,1.52e-24,52;UBERON:0010314,1.77e-23,92;UBERON:0000955,3.22e-21,47;UBERON:0006238,3.22e-21,47;UBERON:0002616,8.02e-21,46;UBERON:0010371,1.38e-19,73;UBERON:0003056,5.69e-19,49;UBERON:0003080,1.25e-18,40;UBERON:0002020,1.41e-18,34;UBERON:0002780,3.34e-18,39;UBERON:0001890,3.34e-18,39;UBERON:0006240,3.34e-18,39;UBERON:0003528,2.59e-15,29;UBERON:0002791,2.59e-15,29;UBERON:0001893,2.59e-15,29;UBERON:0000025,6.27e-14,114;UBERON:0004111,1.46e-12,122;UBERON:0000956,4.47e-11,21;UBERON:0001869,4.47e-11,21;UBERON:0000203,4.47e-11,21;UBERON:0002619,3.83e-09,17;UBERON:0000119,9.62e-07,176 | |||
|phase1_expression=69.3444507963758,7.67745896806594,8.64498554840118,0.60492842261366,2.00358291978539,12.4230661214798,16.3528848416868,54.4900424923452,15.9091256031383,14.2779361056416,68.3159693219765,76.1026396815509,50.6754160596369,55.3371147312254,11.3257319017325,9.11138703254217,4.89693314689703,28.2338637995623,25.7775135178789,34.7999514474385,62.6769048413384,34.1560872131045,32.1275740640891,25.2788028013583,19.2703796096423,12.0588712464154,9.47676391549965,7.97243560937789,7.03086651988583,5.04060259519861,13.7472916606289,15.8757668364908,11.0711661765223,15.8481681015439,15.8868390863201,16.6234645358492,14.4960242946282,196.709866446347,122.669649090237,139.780839641004,195.292854026297,159.149597995318,150.993719792689,120.609151620603,111.109116616588,109.026770784039,77.4567430904559,120.785936634767,148.288173345768,160.793526534432,125.847793041201,152.37771822687,21.4761735753903,48.5992635147601,28.9040667262519,43.9913635621469,69.9141593450566,57.7552743350735,113.904167463954,143.356555382721,136.273751753829,90.8103345945274,117.38691308667,16.1981949110652,25.7105254267413,17.0515227587064,56.9240209984969,61.0907105461272,118.102468419356,121.910362313517,133.346025496776,135.969868576211,131.637650407162,126.165523191403,102.458808518495,131.448286485233,150.858756969163,111.854108162624,119.045063273589,166.968040266425,148.667420853916,164.608625095936,128.424179540635,127.18434986716,146.380721370184,183.258980164621,149.775008200656,153.033945022572,52.8568829465625,34.4606314086942,59.1323556951423,36.1378028332182,18.3592260101093,40.4777393728363,74.7242880064819,86.9172160968831,32.1617722101712,92.2028045147292,87.028311541961,112.361984694288,85.9144860637751,116.777094447029,107.018200676791,56.8853362522665,60.61749148314,62.0731670413992,61.1684578467888,34.0267961562799,27.7063535502474,49.4312323085867,54.9948485848651,59.9796992274918,64.3417237344403,57.8774939722071,43.3902329330751,61.3252965688816,124.33906877039,41.5000154360146,33.6152009740952,50.6330240335391,30.4761295475343,32.0017667069247,9.31958806090611,97.4960054048452,96.7643785478162,11.240110429178,21.2072770375479,14.3976655438418,17.7898317902291,105.003238222781,78.2326030819851,104.544420957903,104.468416435558,101.774752017472,110.958815794805,109.350611307669,48.8828946481518,35.2071726826563,29.0631172198726,31.7767202388576,70.0047983139346,82.3049533871833,73.4653489605825,83.9425835344933,67.4241706589659,77.636914492619,87.6111124633465,69.3325033580562,45.7004145017626,62.783218615716,66.1576226856448,69.9234386443964,62.8386783249851,48.7553033131033,57.6189981942242,60.3073828460034,14.0442637462647,12.610047448621,16.1973194655488,63.1733606233281,58.396988935293,56.5394872987587,55.8717575981096,70.0480665020758,72.9683443957299,56.2732146295987,66.5318035471056,58.8497325530534,75.0392915605471,62.8761387422935,58.6938181111995,63.5969945300196,62.1326826273673,52.7431225728261,113.766862173193,107.123701486835,4.29544417878937,3.96675849995316,55.6682333896961,59.6848246681327,42.2685273136466,34.2861991859682,37.1371333220933,37.6646739702867,15.6594590309689,39.1983512243146,38.7056221552415,34.2205131910779,34.7036075072034,25.1669434423182,13.400559092231,9.95706366271836,65.4354258288132,56.438765229206,56.3538678365402,56.411417813152,67.883370508669,50.427654501139,59.9482371937959,43.397383506003,57.7755318456259,53.4309719781396,38.5388415213294,24.5262305402658,25.7492283598296,21.8116249013308,23.1260538382893,29.4236134897949,36.1568709529616,39.7020669682119,28.6979351391813,41.4587733914003,47.443508154027,43.5404908772149,56.79085650685,48.7477234437926,46.1051352751314,43.9023604440664,67.9891739813105,56.278949295834,52.8006523672164,64.3333875087963,70.4070744865506,62.6473402832391,83.0772306692188,47.0272091337295,60.216625048565,56.0305664811401,64.2602717689673,67.3478223481683,65.2749231453085,61.7651480143054,25.6345182696763,25.5635671394793,8.85175691434265,14.9005843004556,99.3808152024432,104.083977693876,47.7050691046125,31.0539240461379,82.6631534870592,83.5538912794806,89.8315568545772,84.1170168792983,85.331892173557,99.9260153684578,85.8198687550776,88.8457808050388,94.0784911512726,100.252250723604,55.9243935720578,84.5811617419462,47.4001051718906,43.7170825877219,53.0980553359851,97.3550350981476,86.4645372919188,84.3064706508865,82.9798318994972,65.4836865120566,47.2923776497845,58.5289304458784,62.3870412173262,54.990395880832,52.7093042874994,63.9440368138758,98.7274856685985,64.2818105691778,85.6354486641835,93.6652843088058,81.044486774519,90.7897281594539,100.374902567294,99.560038360474,28.395276675709,45.967559377449,48.0751907759817,16.6535115470895,22.1206264573391,33.2324216354139,29.3655966247716,22.8155850645635,14.2825609948627,88.0770184549921,24.0927941924972,52.6286513306217,40.5576014939669,18.8368457004691,13.9428112275446,19.9037010689675,28.7263546689615,32.1888340344413,31.7859939750175,28.6401185404534,53.144446921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|phase1_expression=69.3444507963758,7.67745896806594,8.64498554840118,0.60492842261366,2.00358291978539,12.4230661214798,16.3528848416868,54.4900424923452,15.9091256031383,14.2779361056416,68.3159693219765,76.1026396815509,50.6754160596369,55.3371147312254,11.3257319017325,9.11138703254217,4.89693314689703,28.2338637995623,25.7775135178789,34.7999514474385,62.6769048413384,34.1560872131045,32.1275740640891,25.2788028013583,19.2703796096423,12.0588712464154,9.47676391549965,7.97243560937789,7.03086651988583,5.04060259519861,13.7472916606289,15.8757668364908,11.0711661765223,15.8481681015439,15.8868390863201,16.6234645358492,14.4960242946282,196.709866446347,122.669649090237,139.780839641004,195.292854026297,159.149597995318,150.993719792689,120.609151620603,111.109116616588,109.026770784039,77.4567430904559,120.785936634767,148.288173345768,160.793526534432,125.847793041201,152.37771822687,21.4761735753903,48.5992635147601,28.9040667262519,43.9913635621469,69.9141593450566,57.7552743350735,113.904167463954,143.356555382721,136.273751753829,90.8103345945274,117.38691308667,16.1981949110652,25.7105254267413,17.0515227587064,56.9240209984969,61.0907105461272,118.102468419356,121.910362313517,133.346025496776,135.969868576211,131.637650407162,126.165523191403,102.458808518495,131.448286485233,150.858756969163,111.854108162624,119.045063273589,166.968040266425,148.667420853916,164.608625095936,128.424179540635,127.18434986716,146.380721370184,183.258980164621,149.775008200656,153.033945022572,52.8568829465625,34.4606314086942,59.1323556951423,36.1378028332182,18.3592260101093,40.4777393728363,74.7242880064819,86.9172160968831,32.1617722101712,92.2028045147292,87.028311541961,112.361984694288,85.9144860637751,116.777094447029,107.018200676791,56.8853362522665,60.61749148314,62.0731670413992,61.1684578467888,34.0267961562799,27.7063535502474,49.4312323085867,54.9948485848651,59.9796992274918,64.3417237344403,57.8774939722071,43.3902329330751,61.3252965688816,124.33906877039,41.5000154360146,33.6152009740952,50.6330240335391,30.4761295475343,32.0017667069247,9.31958806090611,97.4960054048452,96.7643785478162,11.240110429178,21.2072770375479,14.3976655438418,17.7898317902291,105.003238222781,78.2326030819851,104.544420957903,104.468416435558,101.774752017472,110.958815794805,109.350611307669,48.8828946481518,35.2071726826563,29.0631172198726,31.7767202388576,70.0047983139346,82.3049533871833,73.4653489605825,83.9425835344933,67.4241706589659,77.636914492619,87.6111124633465,69.3325033580562,45.7004145017626,62.783218615716,66.1576226856448,69.9234386443964,62.8386783249851,48.7553033131033,57.6189981942242,60.3073828460034,14.0442637462647,12.610047448621,16.1973194655488,63.1733606233281,58.396988935293,56.5394872987587,55.8717575981096,70.0480665020758,72.9683443957299,56.2732146295987,66.5318035471056,58.8497325530534,75.0392915605471,62.8761387422935,58.6938181111995,63.5969945300196,62.1326826273673,52.7431225728261,113.766862173193,107.123701486835,4.29544417878937,3.96675849995316,55.6682333896961,59.6848246681327,42.2685273136466,34.2861991859682,37.1371333220933,37.6646739702867,15.6594590309689,39.1983512243146,38.7056221552415,34.2205131910779,34.7036075072034,25.1669434423182,13.400559092231,9.95706366271836,65.4354258288132,56.438765229206,56.3538678365402,56.411417813152,67.883370508669,50.427654501139,59.9482371937959,43.397383506003,57.7755318456259,53.4309719781396,38.5388415213294,24.5262305402658,25.7492283598296,21.8116249013308,23.1260538382893,29.4236134897949,36.1568709529616,39.7020669682119,28.6979351391813,41.4587733914003,47.443508154027,43.5404908772149,56.79085650685,48.7477234437926,46.1051352751314,43.9023604440664,67.9891739813105,56.278949295834,52.8006523672164,64.3333875087963,70.4070744865506,62.6473402832391,83.0772306692188,47.0272091337295,60.216625048565,56.0305664811401,64.2602717689673,67.3478223481683,65.2749231453085,61.7651480143054,25.6345182696763,25.5635671394793,8.85175691434265,14.9005843004556,99.3808152024432,104.083977693876,47.7050691046125,31.0539240461379,82.6631534870592,83.5538912794806,89.8315568545772,84.1170168792983,85.331892173557,99.9260153684578,85.8198687550776,88.8457808050388,94.0784911512726,100.252250723604,55.9243935720578,84.5811617419462,47.4001051718906,43.7170825877219,53.0980553359851,97.3550350981476,86.4645372919188,84.3064706508865,82.9798318994972,65.4836865120566,47.2923776497845,58.5289304458784,62.3870412173262,54.990395880832,52.7093042874994,63.9440368138758,98.7274856685985,64.2818105691778,85.6354486641835,93.6652843088058,81.044486774519,90.7897281594539,100.374902567294,99.560038360474,28.395276675709,45.967559377449,48.0751907759817,16.6535115470895,22.1206264573391,33.2324216354139,29.3655966247716,22.8155850645635,14.2825609948627,88.0770184549921,24.0927941924972,52.6286513306217,40.5576014939669,18.8368457004691,13.9428112275446,19.9037010689675,28.7263546689615,32.1888340344413,31.7859939750175,28.6401185404534,53.144446921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| ||
|short_description=p1@Atxn10 | |short_description=p1@Atxn10 | ||
}} | }} |
Latest revision as of 06:16, 27 September 2015
Short description: | p1@Atxn10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atxn10_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENSMUST00000016685_5end |
EntrezGene: | Atxn10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.69e-18 | 44 |
neurectodermal cell | 4.69e-18 | 44 |
neural cell | 8.49e-18 | 43 |
electrically responsive cell | 6.93e-17 | 39 |
electrically active cell | 6.93e-17 | 39 |
neuron | 2.42e-16 | 33 |
neuronal stem cell | 2.42e-16 | 33 |
neuroblast | 2.42e-16 | 33 |
electrically signaling cell | 2.42e-16 | 33 |
CNS neuron (sensu Vertebrata) | 2.43e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-14 | 23 |
embryonic cell | 1.04e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.62e-33 | 73 |
nervous system | 1.92e-31 | 75 |
regional part of nervous system | 4.73e-26 | 54 |
neurectoderm | 7.65e-26 | 64 |
neural plate | 7.65e-26 | 64 |
presumptive neural plate | 7.65e-26 | 64 |
ectoderm-derived structure | 5.55e-25 | 95 |
ectoderm | 5.55e-25 | 95 |
presumptive ectoderm | 5.55e-25 | 95 |
neural tube | 1.52e-24 | 52 |
neural rod | 1.52e-24 | 52 |
future spinal cord | 1.52e-24 | 52 |
neural keel | 1.52e-24 | 52 |
structure with developmental contribution from neural crest | 1.77e-23 | 92 |
brain | 3.22e-21 | 47 |
future brain | 3.22e-21 | 47 |
regional part of brain | 8.02e-21 | 46 |
ecto-epithelium | 1.38e-19 | 73 |
pre-chordal neural plate | 5.69e-19 | 49 |
anterior neural tube | 1.25e-18 | 40 |
gray matter | 1.41e-18 | 34 |
regional part of forebrain | 3.34e-18 | 39 |
forebrain | 3.34e-18 | 39 |
future forebrain | 3.34e-18 | 39 |
brain grey matter | 2.59e-15 | 29 |
regional part of telencephalon | 2.59e-15 | 29 |
telencephalon | 2.59e-15 | 29 |
tube | 6.27e-14 | 114 |
anatomical conduit | 1.46e-12 | 122 |
cerebral cortex | 4.47e-11 | 21 |
cerebral hemisphere | 4.47e-11 | 21 |
pallium | 4.47e-11 | 21 |
regional part of cerebral cortex | 3.83e-09 | 17 |
cell layer | 9.62e-07 | 176 |