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FFCP PHASE1:Mm9::chr7:125849222..125849300,-: Difference between revisions

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|id=chr7:125849222..125849300,-
|id=chr7:125849222..125849300,-
|ontology_enrichment_celltype=CL:0000221!9.94e-09!44;CL:0000133!9.94e-09!44;CL:0002319!1.04e-08!43;CL:0000055!7.78e-08!50;CL:0002321!3.36e-07!70;CL:0000220!3.36e-07!70;CL:0000117!5.90e-07!23;CL:0000337!5.90e-07!23
|ontology_enrichment_celltype=CL:0000221!9.94e-09!44;CL:0000133!9.94e-09!44;CL:0002319!1.04e-08!43;CL:0000055!7.78e-08!50;CL:0002321!3.36e-07!70;CL:0000220!3.36e-07!70;CL:0000117!5.90e-07!23;CL:0000337!5.90e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,9.94e-09,44;CL:0000133,9.94e-09,44;CL:0002319,1.04e-08,43;CL:0002321,3.36e-07,70;CL:0000117,5.90e-07,23;CL:0000337,5.90e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.31e-19!75;UBERON:0001016!2.31e-19!75;UBERON:0001017!6.17e-19!73;UBERON:0005743!6.17e-19!73;UBERON:0001049!3.95e-16!52;UBERON:0005068!3.95e-16!52;UBERON:0006241!3.95e-16!52;UBERON:0007135!3.95e-16!52;UBERON:0004121!6.97e-16!102;UBERON:0000924!6.97e-16!102;UBERON:0006601!6.97e-16!102;UBERON:0000955!1.66e-15!50;UBERON:0006238!1.66e-15!50;UBERON:0002616!4.81e-15!49;UBERON:0002020!2.19e-13!34;UBERON:0002346!5.33e-13!71;UBERON:0003075!5.33e-13!71;UBERON:0007284!5.33e-13!71;UBERON:0000033!2.73e-12!63;UBERON:0002791!3.45e-11!29;UBERON:0003528!3.45e-11!29;UBERON:0001893!3.45e-11!29;UBERON:0003080!6.67e-11!40;UBERON:0002780!1.80e-10!39;UBERON:0001890!1.80e-10!39;UBERON:0006240!1.80e-10!39;UBERON:0000956!8.22e-09!21;UBERON:0001869!8.22e-09!21;UBERON:0000203!8.22e-09!21;UBERON:0002619!1.37e-08!17;UBERON:0004111!3.00e-08!122;UBERON:0002021!5.58e-08!10;UBERON:0000411!5.58e-08!10;UBERON:0001950!5.58e-08!10;UBERON:0003056!1.40e-07!49;UBERON:0000025!1.45e-07!114
|ontology_enrichment_uberon=UBERON:0000073!2.31e-19!75;UBERON:0001016!2.31e-19!75;UBERON:0001017!6.17e-19!73;UBERON:0005743!6.17e-19!73;UBERON:0001049!3.95e-16!52;UBERON:0005068!3.95e-16!52;UBERON:0006241!3.95e-16!52;UBERON:0007135!3.95e-16!52;UBERON:0004121!6.97e-16!102;UBERON:0000924!6.97e-16!102;UBERON:0006601!6.97e-16!102;UBERON:0000955!1.66e-15!50;UBERON:0006238!1.66e-15!50;UBERON:0002616!4.81e-15!49;UBERON:0002020!2.19e-13!34;UBERON:0002346!5.33e-13!71;UBERON:0003075!5.33e-13!71;UBERON:0007284!5.33e-13!71;UBERON:0000033!2.73e-12!63;UBERON:0002791!3.45e-11!29;UBERON:0003528!3.45e-11!29;UBERON:0001893!3.45e-11!29;UBERON:0003080!6.67e-11!40;UBERON:0002780!1.80e-10!39;UBERON:0001890!1.80e-10!39;UBERON:0006240!1.80e-10!39;UBERON:0000956!8.22e-09!21;UBERON:0001869!8.22e-09!21;UBERON:0000203!8.22e-09!21;UBERON:0002619!1.37e-08!17;UBERON:0004111!3.00e-08!122;UBERON:0002021!5.58e-08!10;UBERON:0000411!5.58e-08!10;UBERON:0001950!5.58e-08!10;UBERON:0003056!1.40e-07!49;UBERON:0000025!1.45e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.31e-19,75;UBERON:0001017,6.17e-19,73;UBERON:0000073,2.37e-17,54;UBERON:0001049,3.95e-16,52;UBERON:0005068,3.95e-16,52;UBERON:0006241,3.95e-16,52;UBERON:0007135,3.95e-16,52;UBERON:0004121,5.61e-15,95;UBERON:0000924,5.61e-15,95;UBERON:0006601,5.61e-15,95;UBERON:0000955,6.60e-14,47;UBERON:0006238,6.60e-14,47;UBERON:0002616,1.86e-13,46;UBERON:0002020,2.19e-13,34;UBERON:0002346,2.66e-12,64;UBERON:0003075,2.66e-12,64;UBERON:0007284,2.66e-12,64;UBERON:0003528,3.45e-11,29;UBERON:0002791,3.45e-11,29;UBERON:0001893,3.45e-11,29;UBERON:0003080,6.67e-11,40;UBERON:0010371,1.44e-10,73;UBERON:0002780,1.80e-10,39;UBERON:0001890,1.80e-10,39;UBERON:0006240,1.80e-10,39;UBERON:0011216,3.74e-09,194;UBERON:0000956,8.22e-09,21;UBERON:0001869,8.22e-09,21;UBERON:0000203,8.22e-09,21;UBERON:0002619,1.37e-08,17;UBERON:0004111,3.00e-08,122;UBERON:0002021,5.58e-08,10;UBERON:0000411,5.58e-08,10;UBERON:0001950,5.58e-08,10;UBERON:0003056,1.40e-07,49;UBERON:0000025,1.45e-07,114;UBERON:0010314,3.44e-07,92
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6,45.9501995706678,49.2504354147414,58.7538111800657,86.6899378072325,103.306089330773,110.259709937598,191.343593590326,100.970064194307,252.885100426379,293.120328115779,24.6702300972565,31.9334886582198,34.6123115252405,40.5561845720076,32.4395760942294,34.9724571164347,24.9992418900384,30.7237879167333,60.8791984481535,110.027462390505,31.2851009421896,31.2196831546853,24.3424968480641,25.5944021266256,28.2862179154621,31.7890167650024,24.6400671515936,31.3101797610104,25.0396795871406,26.5961755225949,27.2230699869469,26.8009172034319,23.2832656769597,27.6998258170318,79.355634265324,60.8241512244937,28.0804371187659,48.1828848964905,70.5142018217495,58.5569323407688,47.2531190609544,96.0370338274215,112.352151303921,370.477208756796,370.10149015177,399.308172867259,328.239578276443,280.883833105963,288.560468802866,319.285642609644,236.418631692716,255.572318667091,252.149271823136,17.2286996989733,32.3210147454835,48.6590776399282,37.9246478626539,31.0227480689414,40.8132588759031,50.6722539387683,62.0165522289072,52.6307503730577,56.6041754350906,60.5815526737673,57.3424077813672,45.8843386602424,50.6438955522516,48.3032293916708,53.3448934237042,53.1909056086887,50.1563973205633,46.1536208899703,54.9051972101302,43.8872643053332,48.6283708876585,48.4025465593062,58.7199523194607,57.4067220533517,50.5149209113309,51.4027603772491,53.9292908447578,43.185708202984,57.7976539807471,57.4193487721003,49.3507456701573,58.9292702164353,52.2137154796705,52.0847849649082,70.9462041343766,53.1024751171077,61.8828635659099,53.752021311345,61.9861887725839,75.357046576637
|phase1_expression=72.0669811971573,115.859835336268,164.709724659012,386.246797838822,404.222854066702,68.8305014838748,71.4854680222309,35.1215439761087,68.9864738543167,73.028132212462,37.3255170731601,40.2051681336496,24.8241058400248,26.7506431402132,47.3015861778241,43.3297072214228,74.1535590815835,25.5524353940173,28.1084588891765,44.1365237869951,104.688290175967,26.6099749218373,33.6947727989227,71.3566205658594,85.7990711191216,124.034104248844,150.335936659517,95.238284847163,56.0569087396303,62.2514420507029,44.7895631523715,59.0578526317457,54.7407660950267,15.8481681015439,2.88851619751275,8.31173226792462,2.6542016314108,170.760905340658,136.733685291665,90.5696077074671,111.175751237862,116.117732442936,108.754319078978,60.9340599001794,57.2779661390257,55.2475724006661,104.840440142637,180.52482948301,168.059929791871,173.431469974261,103.309979159518,162.440397732418,29.5297386661616,34.8173828165445,34.2815675125313,42.9623258180031,53.00868638867,63.4276673501254,85.9844958653291,112.146087605671,108.385169999557,72.1738853307251,96.9331327761142,77.3913756862003,103.830968069532,103.730096782131,143.208852827797,196.335554019314,62.732215446629,75.06330171242,77.3995857773086,227.663834569831,205.407743085001,66.2675223752901,56.8363643138142,102.952504100322,205.916697468857,181.188332742881,177.87636551073,93.3754917129772,91.7621065332169,82.8252259185248,226.41741219012,178.395747380043,164.410914607848,151.439092933465,135.253096759148,103.638091878867,103.744884866462,83.3554307977844,48.1175051244785,77.4381489283248,169.31286209323,85.2731042787751,119.558860810371,188.619319467978,76.401764551673,35.1086464510799,35.0711106213873,41.3407302177098,72.1118309256604,20.5322363862909,17.8363667794652,21.3320010945999,105.864119054484,90.1961121091351,91.4999245476758,111.900202124679,19.4203412735379,88.3230727435707,55.8622752186957,82.2056791442781,86.2501959737659,91.1871975343366,63.1451357318735,104.303270803631,108.271395867656,114.37809132365,48.6535803572431,39.147577687273,40.413997878252,48.9724005666574,102.515468669967,123.553496338873,149.12605525118,95.5409386480132,24.8017307727255,38.3937747835781,33.9277506285083,157.280171375064,179.79773690772,85.9475768451993,213.630089516308,253.158302757027,200.515462999975,209.291229357407,38.6989582631202,56.107543745152,88.4529654517861,36.1959992124735,33.4409538414149,53.7970924374327,46.2759673599748,38.7311381837788,41.50226448231,43.9430060577035,53.0351761008065,74.7652741435755,29.5328150317994,29.6896545863476,31.6712023495108,35.9481001181223,26.6925359256574,36.5664774848275,36.423438144206,27.6657630877706,47.0482835499867,40.4036214170103,38.0779089190094,31.6902431979318,31.8955441574291,39.2535293985012,38.3526471648041,36.2046186415223,35.7899701898718,37.2054311600653,46.6795718435337,39.933747089572,37.3550859303601,32.0126554954236,40.6154735824737,45.0295961270024,43.0318225970459,53.5483610853883,171.596598028328,78.1046007958769,274.247589876552,60.8236303326152,34.1261200856374,43.6604943097624,53.2222615260245,67.3622972241964,60.2644498819599,72.0955122966599,128.122846617018,86.3022522753817,95.0047089265019,98.6824101324108,92.6079413815821,97.9713155433101,112.391785934841,147.563683481486,45.5202962287396,35.4170389090159,42.8289395557706,45.2105947816598,50.4276466635827,54.0045813155453,67.5366216487068,111.888492168538,134.233912304375,186.576511849762,146.151145153964,34.0364015660832,39.3117990226406,34.8536274196523,40.7748843990891,42.9295344359302,45.0687757653113,36.537409456253,82.8511008820431,37.3403521935791,27.3159592401974,41.3076451912039,37.1324831006327,43.4435670069032,54.1780188836175,151.969709229461,128.772973546123,38.2772651776379,35.2004349114776,43.9639772157737,58.2031815755485,110.219117396715,134.732700741484,206.841666729267,89.3791267082103,90.3575933767002,89.2946704481928,121.258852889646,110.863758357905,146.674145401653,60.3165135757089,79.4102298375316,129.825768077026,86.3682015933813,176.605648986571,190.46899071233,31.9673143484517,89.374708230348,78.8770548540642,72.6216064391748,66.3504065017021,50.9003539638936,48.1245136017971,41.3291734951695,53.0302019194112,64.2962887404886,57.7120155801924,154.555553198889,54.3630526347669,41.133154447136,38.1155484887368,63.6784674673987,79.6470830039777,40.3015856017269,48.9764162282897,50.5461613745807,73.5301713273124,71.3249543229912,75.2026333119524,71.2526109775911,57.0395805415554,36.6602639205547,55.8718625447493,41.2542172992747,71.4923172082955,37.4527075585125,49.544375888795,45.8681254967608,57.6355759337389,67.7801506887868,73.5534122091481,104.735942495422,52.3317908982074,81.9790114242984,18.3038570385618,38.5833831883063,31.4855632057016,30.0961495391498,44.8840013451793,50.2271153219887,91.5249827017731,137.585574091798,40.4963987490911,29.9260958546673,34.075793036027,39.5573759709851,40.8715740885865,44.8405219484784,27.1965487990168,32.328785486765,32.615193817844,245.350348829884,35.113295287506,45.9501995706678,49.2504354147414,58.7538111800657,86.6899378072325,103.306089330773,110.259709937598,191.343593590326,100.970064194307,252.885100426379,293.120328115779,24.6702300972565,31.9334886582198,34.6123115252405,40.5561845720076,32.4395760942294,34.9724571164347,24.9992418900384,30.7237879167333,60.8791984481535,110.027462390505,31.2851009421896,31.2196831546853,24.3424968480641,25.5944021266256,28.2862179154621,31.7890167650024,24.6400671515936,31.3101797610104,25.0396795871406,26.5961755225949,27.2230699869469,26.8009172034319,23.2832656769597,27.6998258170318,79.355634265324,60.8241512244937,28.0804371187659,48.1828848964905,70.5142018217495,58.5569323407688,47.2531190609544,96.0370338274215,112.352151303921,370.477208756796,370.10149015177,399.308172867259,328.239578276443,280.883833105963,288.560468802866,319.285642609644,236.418631692716,255.572318667091,252.149271823136,17.2286996989733,32.3210147454835,48.6590776399282,37.9246478626539,31.0227480689414,40.8132588759031,50.6722539387683,62.0165522289072,52.6307503730577,56.6041754350906,60.5815526737673,57.3424077813672,45.8843386602424,50.6438955522516,48.3032293916708,53.3448934237042,53.1909056086887,50.1563973205633,46.1536208899703,54.9051972101302,43.8872643053332,48.6283708876585,48.4025465593062,58.7199523194607,57.4067220533517,50.5149209113309,51.4027603772491,53.9292908447578,43.185708202984,57.7976539807471,57.4193487721003,49.3507456701573,58.9292702164353,52.2137154796705,52.0847849649082,70.9462041343766,53.1024751171077,61.8828635659099,53.752021311345,61.9861887725839,75.357046576637
|short_description=p1@Gde1
|short_description=p1@Gde1
}}
}}

Revision as of 13:59, 14 November 2012

Short description:p1@Gde1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gde1_5end
Coexpression cluster:MCL_coexpression_mm9:240
Association with transcript: 0bp_to_ENSMUST00000038791, NM_019580, uc009jki.1_5end
EntrezGene:Gde1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gde1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G772.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5115.86
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6164.71
CD326+ enterocyte, pool1.CNhs13542.11848-124I3386.25
CD326+ enterocyte, pool2.CNhs13197.11849-124I4404.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I768.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I871.49
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E935.12
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E768.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F273.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E637.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F140.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A343.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A574.15
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.55
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A644.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3104.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.69
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D171.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D285.80
GP2+ M cell, pool1.CNhs13228.11845-124H9124.03
GP2+ M cell, pool2.CNhs13231.11846-124I1150.34
GP2+ M cell, pool3.CNhs13240.11847-124I295.24
Ileum epithelium, pool1.CNhs13199.10252-104B956.06
Ileum epithelium, pool2.CNhs13232.10253-104C162.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C844.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I359.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G654.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8170.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1136.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H390.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9111.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2116.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4108.75
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D860.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D957.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B355.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7104.84
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2180.52
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8168.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3173.43
Mouse Astrocytes, donor2.CNhs12078.11552-120C4103.31
Mouse Astrocytes, donor3.CNhs12107.11633-122C4162.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C142.96
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E153.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C563.43
Mouse Granule cells, donor1.CNhs12131.11713-123C385.98
Mouse Granule cells, donor2.CNhs12357.11731-123E3112.15
Mouse Granule cells, donor3.CNhs12108.11636-122C7108.39
Mouse Meningeal cells, donor1.CNhs12132.11716-123C672.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D196.93
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C777.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7103.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2103.73
Mouse Microglia, donor1.CNhs12629.11718-123C8143.21
Mouse Microglia, donor2.CNhs12634.11736-123E8196.34
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D562.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F575.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D977.40
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1227.66
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5205.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D266.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F256.84
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6102.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3205.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3181.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7177.88
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D493.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F491.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D882.83
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4226.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5178.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6164.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6151.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6135.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1103.64
Mouse Schwann, donor1.CNhs12507.11728-123D9103.74
Mouse Schwann, donor2.CNhs12573.11746-123F983.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G348.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F777.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C4169.31
Mouse hepatocyte, donor3.CNhs12615.11637-122C885.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F4119.56
Mouse hepatocyte, donor8.CNhs13091.11824-124F6188.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A776.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I735.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E335.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I841.34
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G672.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1105.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G290.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G391.50
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6111.90
accessory axillary lymph node, adult.CNhs10475.1063-29H919.42
adrenal gland, adult.CNhs10508.49-24D788.32
adrenal gland, embryo E14.CNhs11038.406-44C555.86
adrenal gland, embryo E16.CNhs11004.1254-43D682.21
adrenal gland, embryo E17.CNhs11043.1263-45I186.25
adrenal gland, embryo E18.CNhs11026.1262-18F591.19
adrenal gland, neonate N00.CNhs11191.1311-23C163.15
adrenal gland, neonate N25.CNhs11223.1377-27I3104.30
amnion, adult pregnant day17.5.CNhs10488.583-22A8108.27
aorta, adult.CNhs10498.46-23H1114.38
bone (os femoris), adult.CNhs10483.56-12G248.65
bone (os femoris), neonate N02.CNhs11227.1985-43F539.15
bone (os femoris), neonate N16.CNhs11225.1525-43A640.41
bone (os femoris), neonate N20.CNhs11195.1350-25C348.97
cecum, adult.CNhs10467.37-13H4102.52
cerebellum, adult.CNhs10494.15-8B2123.55
cerebellum, neonate N30.CNhs11135.1395-42I2149.13
colon, adult.CNhs10468.36-18H795.54
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D138.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D433.93
corpora quadrigemina, adult.CNhs10501.16-22A4157.28
corpus striatum, adult.CNhs10487.19-21D8179.80
corpus striatum, neonate N00.CNhs11226.630-43F185.95
cortex, adult.CNhs10473.12-14D5213.63
cortex, neonate N30.CNhs11107.1392-42F2253.16
diencephalon, adult.CNhs10482.20-12F2200.52
diencephalon, neonate N30.CNhs11201.1388-42B2209.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B138.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A256.11
epididymis, adult.CNhs10490.58-23B288.45
eyeball, adult.CNhs10484.31-12G436.20
eyeball, embryo E12.CNhs11016.345-16C633.44
eyeball, embryo E14.CNhs10521.399-16E253.80
eyeball, embryo E15.CNhs10593.426-16C946.28
eyeball, embryo E17.CNhs11023.1261-18D438.73
eyeball, neonate N00.CNhs11207.633-15C641.50
eyeball, neonate N01.CNhs11140.1532-43E743.94
eyeball, neonate N02.CNhs11205.1551-44G853.04
eyeball, neonate N16.CNhs11188.777-19A274.77
forelimb, embryo E11.CNhs10596.335-25E229.53
forelimb, embryo E12.CNhs10600.359-14H229.69
forelimb, embryo E13.CNhs10589.384-1E231.67
forelimb, embryo E14.CNhs10577.413-26A835.95
forelimb, embryo E15.CNhs11007.437-20E726.69
forelimb, embryo E17.CNhs10598.1517-43C436.57
forelimb, embryo E18.CNhs11008.1520-43B536.42
gonad, embryo E13.CNhs11044.1564-45I627.67
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C847.05
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D240.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D538.08
heart, embryo E11.CNhs10586.331-24E931.69
heart, embryo E12.CNhs11015.353-12F531.90
heart, embryo E13.CNhs11013.376-3I939.25
heart, embryo E14.CNhs10597.403-26D438.35
heart, embryo E15.CNhs11017.431-16C836.20
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E537.21
heart, embryo E18.CNhs11030.1283-20G346.68
heart, neonate N00.CNhs11213.639-21E339.93
heart, neonate N03.CNhs11221.1349-25I237.36
heart, neonate N10.CNhs11118.749-24G132.01
heart, neonate N16.CNhs11209.782-15G140.62
heart, neonate N20.CNhs11127.821-26I645.03
heart, neonate N25.CNhs11196.1351-25D343.03
heart, neonate N30.CNhs11202.1390-42D253.55
hippocampus, adult.CNhs10478.13-16E8171.60
hippocampus, neonate N00.CNhs11228.627-43G178.10
intestinal mucosa, adult.CNhs10506.860-29I3274.25
intestine, adult.CNhs10496.178-9A360.82
intestine, embryo E12.CNhs11019.1251-16I534.13
intestine, embryo E13.CNhs11010.381-16D543.66
intestine, embryo E15.CNhs10602.976-16D853.22
intestine, embryo E16.CNhs10585.463-22H467.36
intestine, embryo E17.CNhs10582.482-18D360.26
intestine, embryo E18.CNhs10526.1289-20F772.10
intestine, neonate N00.CNhs11126.644-26D1128.12
intestine, neonate N01.CNhs11192.1322-23E986.30
intestine, neonate N06.CNhs11102.688-20B895.00
intestine, neonate N07.CNhs11095.720-20F298.68
intestine, neonate N10.CNhs11098.755-23A592.61
intestine, neonate N20.CNhs11187.827-18D197.97
intestine, neonate N25.CNhs11121.1352-25E3112.39
intestine, neonate N30.CNhs11131.1384-42G1147.56
kidney, embryo E14.CNhs10606.411-4I945.52
kidney, embryo E15.CNhs10997.434-16F835.42
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I245.21
kidney, embryo E18.CNhs11001.1288-20C750.43
kidney, neonate N00.CNhs11214.646-21G754.00
kidney, neonate N10.CNhs11206.758-6D567.54
kidney, neonate N20.CNhs11113.832-19I1111.89
kidney, neonate N25.CNhs11122.1353-25F3134.23
kidney, neonate N30.CNhs11203.1385-42H1186.58
liver, adult pregnant day01.CNhs10466.508-5B2146.15
liver, embryo E12.CNhs10601.355-15F834.04
liver, embryo E13.CNhs10524.378-3H639.31
liver, embryo E14.CNhs10594.409-16E134.85
liver, embryo E15.CNhs10520.433-16D740.77
liver, embryo E16.CNhs10523.462-17F542.93
liver, embryo E17.CNhs10510.481-18A345.07
liver, embryo E18.CNhs10579.499-43G436.54
liver, neonate N00.CNhs11117.641-24F482.85
liver, neonate N03.CNhs11123.1345-25G237.34
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H241.31
liver, neonate N10.CNhs11115.751-24B937.13
liver, neonate N20.CNhs11220.823-25A343.44
liver, neonate N25.CNhs11198.1368-26H154.18
liver, neonate N30.CNhs11106.1382-42D1151.97
lung, adult.CNhs10474.28-22B1128.77
lung, embryo E12.CNhs10522.354-16G238.28
lung, embryo E14.CNhs10604.404-26F835.20
lung, embryo E15.CNhs11020.432-17C543.96
lung, embryo E16.CNhs10998.458-17B658.20
lung, embryo E17.CNhs10605.480-44A6110.22
lung, embryo E18.CNhs10583.1287-20I6134.73
lung, neonate N00.CNhs11224.640-42C6206.84
lung, neonate N06.CNhs11212.683-20E589.38
lung, neonate N07.CNhs11111.715-19A390.36
lung, neonate N10.CNhs11219.750-23E689.29
lung, neonate N20.CNhs11109.822-18A4121.26
lung, neonate N25.CNhs11119.1359-25C7110.86
lung, neonate N30.CNhs11133.1394-42H2146.67
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A179.41
mammary gland, adult lactating day02.CNhs10480.595-22B6129.83
mammary gland, adult pregnant day19.CNhs10476.588-5H286.37
medulla oblongata, adult.CNhs10477.17-12C2176.61
medulla oblongata, neonate N30.CNhs11200.1396-42A3190.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C289.37
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E178.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E272.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E366.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D750.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D848.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D941.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D453.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D564.30
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D657.71
olfactory brain, adult.CNhs10489.18-22I9154.56
ovary, adult.CNhs10507.91-2I754.36
ovary, embryo E18.CNhs11040.505-44H741.13
ovary, neonate N00.CNhs11217.1299-22I438.12
oviduct, adult pregnant day01.CNhs10500.988-6G663.68
pancreas, adult.CNhs10486.34-16E479.65
pancreas, embryo E14.CNhs11012.405-44F440.30
pancreas, embryo E15.CNhs11042.1556-45F248.98
pancreas, embryo E16.CNhs11003.460-26E550.55
pancreas, embryo E17.CNhs10599.1558-45G373.53
pancreas, embryo E18.CNhs10580.1535-43I771.32
pancreas, neonate N00.CNhs11105.645-26G975.20
pancreas, neonate N01.CNhs11138.1531-43D771.25
pancreas, neonate N02.CNhs11139.1539-43D857.04
pancreas, neonate N16.CNhs11136.787-43B636.66
pancreas, neonate N25.CNhs11094.1555-45E255.87
pancreas, neonate N30.CNhs11182.1548-44H541.25
pituitary gland, adult.CNhs10493.21-1G871.49
pituitary gland, embryo E12.CNhs11018.346-16E637.45
pituitary gland, embryo E13.CNhs11009.370-44C749.54
pituitary gland, embryo E14.CNhs11037.398-44A545.87
pituitary gland, embryo E15.CNhs10592.427-16B957.64
pituitary gland, embryo E16.CNhs11036.449-43F667.78
pituitary gland, embryo E17.CNhs11039.1265-44F573.55
pituitary gland, neonate N00.CNhs11190.1308-22E9104.74
placenta, adult pregnant day10.CNhs10472.539-13I752.33
placenta, adult pregnant day17.CNhs10464.577-18G381.98
prostate, adult.CNhs10470.859-1F818.30
skin, adult.CNhs10492.30-1C338.58
skin, neonate N00.CNhs11124.650-25G431.49
skin, neonate N03.CNhs11215.662-22H330.10
skin, neonate N06.CNhs11097.693-20I544.88
skin, neonate N10.CNhs11108.762-6C450.23
small intestine, neonate N16.CNhs11114.790-21I191.52
spinal cord, adult.CNhs10505.24-13C9137.59
spleen, adult.CNhs10465.25-2G240.50
spleen, embryo E16.CNhs11035.461-43C129.93
spleen, embryo E18.CNhs11011.1271-21F234.08
spleen, neonate N10.CNhs11116.752-24D139.56
spleen, neonate N20.CNhs11112.824-19H140.87
spleen, neonate N25.CNhs11099.1354-25G344.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C627.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.62
stomach, adult.CNhs10503.33-1H6245.35
stomach, embryo E12.CNhs10588.356-43E335.11
stomach, embryo E15.CNhs10603.1252-16G845.95
stomach, embryo E16.CNhs11022.459-17D449.25
stomach, embryo E17.CNhs11006.1035-18D558.75
stomach, embryo E18.CNhs10999.1286-20C686.69
stomach, neonate N03.CNhs11193.1340-24B8103.31
stomach, neonate N07.CNhs11210.718-18A9110.26
stomach, neonate N25.CNhs11104.1355-25E4191.34
stomach, neonate N30.CNhs11134.1386-42I1100.97
submandibular gland, adult.CNhs10469.59-29C1252.89
testis, adult.CNhs10504.57-7G5293.12
testis, embryo E13.CNhs11031.389-23F524.67
testis, embryo E15.CNhs11034.443-27C531.93
testis, embryo E16.CNhs11033.470-26G534.61
testis, embryo E17.CNhs11029.486-18I540.56
testis, embryo E18.CNhs11027.503-18G532.44
testis, neonate N00.CNhs11189.1300-22B734.97
testis, neonate N07.CNhs11222.726-26I425.00
testis, neonate N10.CNhs11204.763-44D930.72
testis, neonate N20.CNhs11110.839-18H360.88
testis, neonate N30.CNhs11130.1391-42E2110.03
thymus, adult.CNhs10471.38-12B531.29
thymus, embryo E14.CNhs11041.402-44I431.22
thymus, embryo E15.CNhs11005.430-45I224.34
thymus, embryo E16.CNhs11002.456-26C525.59
thymus, embryo E17.CNhs10581.478-18C128.29
thymus, embryo E18.CNhs10595.1273-19G431.79
thymus, neonate N02.CNhs11181.1541-43F824.64
thymus, neonate N03.CNhs11137.2104-43C731.31
thymus, neonate N06.CNhs11197.681-26C425.04
thymus, neonate N07.CNhs11211.713-19D326.60
thymus, neonate N10.CNhs11194.748-24E427.22
thymus, neonate N20.CNhs11186.820-7A226.80
thymus, neonate N25.CNhs11125.1362-25G723.28
thymus, neonate N30.CNhs11132.1393-42G227.70
tongue, adult.CNhs10499.32-1B479.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H360.82
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G548.18
urinary bladder, adult.CNhs10481.879-12E470.51
uterus, adult pregnant day19.CNhs10497.590-15F558.56
uterus, adult.CNhs10509.92-27E547.25
vagina, adult.CNhs10502.89-27D596.04
vesicular gland, adult.CNhs10491.51-27F8112.35
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1370.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2370.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3399.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7328.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4280.88
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5288.56
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6319.29
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7236.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8255.57
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9252.15
whole body, embryo E11.CNhs11014.324-5I817.23
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H248.66
whole body, embryo E14.5.CNhs10578.420-27D237.92
whole body, embryo E14.CNhs10519.395-14B131.02
whole body, embryo E16.CNhs10514.453-14F240.81
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G562.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G552.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G556.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G560.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G557.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G545.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G553.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G553.19
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G550.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G546.15
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G554.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G548.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G558.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G557.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G550.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G551.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G553.93
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G543.19
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G557.80
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G557.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G549.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G558.93
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G552.21
whole body, embryo E17.5.CNhs10513.490-9F952.08
whole body, embryo E17.CNhs10517.475-3I570.95
whole body, embryo E18.CNhs10516.493-3B353.10
whole body, neonate N00.CNhs10525.657-19C261.88
whole body, neonate N01.CNhs10576.659-23C653.75
whole body, neonate N06.CNhs10515.692-21D161.99
whole body, neonate N10.CNhs10518.761-6B475.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell9.94e-0944
neurectodermal cell9.94e-0944
neural cell1.04e-0843
embryonic cell3.36e-0770
CNS neuron (sensu Vertebrata)5.90e-0723
neuroblast (sensu Vertebrata)5.90e-0723

Uber anatomy
Ontology termp-valuen
nervous system2.31e-1975
central nervous system6.17e-1973
regional part of nervous system2.37e-1754
neural tube3.95e-1652
neural rod3.95e-1652
future spinal cord3.95e-1652
neural keel3.95e-1652
ectoderm-derived structure5.61e-1595
ectoderm5.61e-1595
presumptive ectoderm5.61e-1595
brain6.60e-1447
future brain6.60e-1447
regional part of brain1.86e-1346
gray matter2.19e-1334
neurectoderm2.66e-1264
neural plate2.66e-1264
presumptive neural plate2.66e-1264
brain grey matter3.45e-1129
regional part of telencephalon3.45e-1129
telencephalon3.45e-1129
anterior neural tube6.67e-1140
ecto-epithelium1.44e-1073
regional part of forebrain1.80e-1039
forebrain1.80e-1039
future forebrain1.80e-1039
organ system subdivision3.74e-09194
cerebral cortex8.22e-0921
cerebral hemisphere8.22e-0921
pallium8.22e-0921
regional part of cerebral cortex1.37e-0817
anatomical conduit3.00e-08122
occipital lobe5.58e-0810
visual cortex5.58e-0810
neocortex5.58e-0810
pre-chordal neural plate1.40e-0749
tube1.45e-07114
structure with developmental contribution from neural crest3.44e-0792







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