FFCP PHASE1:Mm9::chr12:73509675..73509727,-: Difference between revisions
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|id=chr12:73509675..73509727,- | |id=chr12:73509675..73509727,- | ||
|ontology_enrichment_celltype=CL:0000221!7.21e-16!44;CL:0000133!7.21e-16!44;CL:0002319!1.76e-15!43;CL:0000055!7.47e-14!50;CL:0000540!3.97e-12!33;CL:0000047!3.97e-12!33;CL:0000031!3.97e-12!33;CL:0000404!3.97e-12!33;CL:0000117!1.24e-11!23;CL:0000337!1.24e-11!23;CL:0000393!1.50e-10!39;CL:0000211!1.50e-10!39 | |ontology_enrichment_celltype=CL:0000221!7.21e-16!44;CL:0000133!7.21e-16!44;CL:0002319!1.76e-15!43;CL:0000055!7.47e-14!50;CL:0000540!3.97e-12!33;CL:0000047!3.97e-12!33;CL:0000031!3.97e-12!33;CL:0000404!3.97e-12!33;CL:0000117!1.24e-11!23;CL:0000337!1.24e-11!23;CL:0000393!1.50e-10!39;CL:0000211!1.50e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.79e-16,44;CL:0000133,3.79e-16,44;CL:0002319,9.42e-16,43;CL:0000540,2.47e-12,33;CL:0000047,2.47e-12,33;CL:0000031,2.47e-12,33;CL:0000404,2.47e-12,33;CL:0000117,7.92e-12,23;CL:0000337,7.92e-12,23;CL:0000393,9.72e-11,39;CL:0000211,9.72e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-33!73;UBERON:0005743!1.44e-33!73;UBERON:0000073!6.72e-33!75;UBERON:0001016!6.72e-33!75;UBERON:0004121!4.65e-32!102;UBERON:0000924!4.65e-32!102;UBERON:0006601!4.65e-32!102;UBERON:0002346!5.09e-28!71;UBERON:0003075!5.09e-28!71;UBERON:0007284!5.09e-28!71;UBERON:0000033!4.93e-26!63;UBERON:0001049!7.17e-26!52;UBERON:0005068!7.17e-26!52;UBERON:0006241!7.17e-26!52;UBERON:0007135!7.17e-26!52;UBERON:0000955!7.50e-25!50;UBERON:0006238!7.50e-25!50;UBERON:0002616!3.15e-24!49;UBERON:0003056!3.43e-20!49;UBERON:0002020!4.36e-19!34;UBERON:0003080!5.75e-19!40;UBERON:0002780!2.75e-18!39;UBERON:0001890!2.75e-18!39;UBERON:0006240!2.75e-18!39;UBERON:0002791!1.73e-16!29;UBERON:0003528!1.73e-16!29;UBERON:0001893!1.73e-16!29;UBERON:0000956!3.70e-12!21;UBERON:0001869!3.70e-12!21;UBERON:0000203!3.70e-12!21;UBERON:0000025!6.07e-12!114;UBERON:0004111!9.40e-12!122;UBERON:0002619!1.30e-10!17;UBERON:0007811!3.31e-10!86;UBERON:0000468!1.76e-09!333;UBERON:0000153!3.13e-08!94;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0003076!1.92e-07!12;UBERON:0003057!1.92e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!1.44e-33!73;UBERON:0005743!1.44e-33!73;UBERON:0000073!6.72e-33!75;UBERON:0001016!6.72e-33!75;UBERON:0004121!4.65e-32!102;UBERON:0000924!4.65e-32!102;UBERON:0006601!4.65e-32!102;UBERON:0002346!5.09e-28!71;UBERON:0003075!5.09e-28!71;UBERON:0007284!5.09e-28!71;UBERON:0000033!4.93e-26!63;UBERON:0001049!7.17e-26!52;UBERON:0005068!7.17e-26!52;UBERON:0006241!7.17e-26!52;UBERON:0007135!7.17e-26!52;UBERON:0000955!7.50e-25!50;UBERON:0006238!7.50e-25!50;UBERON:0002616!3.15e-24!49;UBERON:0003056!3.43e-20!49;UBERON:0002020!4.36e-19!34;UBERON:0003080!5.75e-19!40;UBERON:0002780!2.75e-18!39;UBERON:0001890!2.75e-18!39;UBERON:0006240!2.75e-18!39;UBERON:0002791!1.73e-16!29;UBERON:0003528!1.73e-16!29;UBERON:0001893!1.73e-16!29;UBERON:0000956!3.70e-12!21;UBERON:0001869!3.70e-12!21;UBERON:0000203!3.70e-12!21;UBERON:0000025!6.07e-12!114;UBERON:0004111!9.40e-12!122;UBERON:0002619!1.30e-10!17;UBERON:0007811!3.31e-10!86;UBERON:0000468!1.76e-09!333;UBERON:0000153!3.13e-08!94;UBERON:0002021!1.18e-07!10;UBERON:0000411!1.18e-07!10;UBERON:0001950!1.18e-07!10;UBERON:0003076!1.92e-07!12;UBERON:0003057!1.92e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.39e-34,73;UBERON:0001016,1.63e-33,75;UBERON:0004121,3.17e-31,95;UBERON:0000924,3.17e-31,95;UBERON:0006601,3.17e-31,95;UBERON:0002346,2.34e-28,64;UBERON:0003075,2.34e-28,64;UBERON:0007284,2.34e-28,64;UBERON:0000073,1.39e-27,54;UBERON:0001049,2.40e-26,52;UBERON:0005068,2.40e-26,52;UBERON:0006241,2.40e-26,52;UBERON:0007135,2.40e-26,52;UBERON:0010314,1.64e-24,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.94e-23,47;UBERON:0006238,1.94e-23,47;UBERON:0002616,8.18e-23,46;UBERON:0003056,1.48e-20,49;UBERON:0002020,1.98e-19,34;UBERON:0003080,2.63e-19,40;UBERON:0002780,1.30e-18,39;UBERON:0001890,1.30e-18,39;UBERON:0006240,1.30e-18,39;UBERON:0003528,8.87e-17,29;UBERON:0002791,8.87e-17,29;UBERON:0001893,8.87e-17,29;UBERON:0000956,2.30e-12,21;UBERON:0001869,2.30e-12,21;UBERON:0000203,2.30e-12,21;UBERON:0000025,6.20e-12,114;UBERON:0004111,1.24e-11,122;UBERON:0002619,8.68e-11,17;UBERON:0002021,9.00e-08,10;UBERON:0000411,9.00e-08,10;UBERON:0001950,9.00e-08,10;UBERON:0003076,1.47e-07,12;UBERON:0003057,1.47e-07,12 | |||
|phase1_expression=9.28863313207805,0.348975407639361,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0,0,0.0797721589953364,0,0,0,1.01237633694913,0.699561878128147,2.20823515750766,1.91960207048034,2.12194825899015,28.4895022006084,0,0,0.95995453676044,1.14704640533585,0,0,0.215471232685889,0,1.00812051903972,0.665191531965914,0,0,0,0,0,0,0,3.1253413780952,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.202753862439029,0.183546752161682,17.2126095756569,55.5964148770139,70.7389508404999,78.1608194278619,22.2578410384326,63.2511283205875,0.167782606057736,0,0,15.4355661621568,17.1920063963254,34.5500301825886,60.8972547187389,74.0587370980846,47.5373552629634,8.4711133017283,9.78224275722253,1.7997994345628,2.96659908770092,3.5524005747305,87.1836321608558,189.803842828848,13.7907184370275,19.3058491814318,15.984697062705,80.2679266174688,71.3405387273712,24.3756690437759,12.8432931164437,22.9804696652505,77.0811166995721,84.2736431362239,96.7721159514334,63.964849549144,55.9904378846747,51.5704236851192,99.9475136424944,92.8558306552272,98.2492733204889,73.9517749538906,68.7655218259667,58.1566270974938,1.96888102666279,4.76100828672749,0.289864488701678,5.16254326188832,0,0.539703191637817,3.24888208723835,0.448026887097336,7.02222100658759,0,0,0,21.4081998060554,0,0,0,0,0,0,5.709193985953,11.9111426477699,10.8362761517322,4.68410382268567,11.5696881758614,5.30415643688935,6.33035090321015,7.4080885495494,3.64433114856059,7.66304399976559,4.916378135277,0.884610551949874,1.61766849947409,0.441683036920787,0.969750506270444,0,151.36767205497,118.546836056416,2.55457055208591,0.11981512450592,0,0.381210681219194,146.944617256131,261.690344812254,55.4135692817732,188.773211728812,171.585071868652,109.919875572007,146.017136760982,2.95334155165917,1.24406970610093,2.0217820674694,17.6771158944638,1.17108398666433,4.82794419310293,4.86167750474443,10.5493372485001,21.5675702309709,28.953700784376,28.672727715277,33.372734825333,1.5089759505299,1.13463648100692,0.879755620819744,1.31517439456545,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0,4.55676699578104,3.04883877975425,2.70093092191522,1.65721314909647,1.37734962223183,1.69693824176116,0.465067889500816,1.87791380979733,2.56883753207773,1.48103864922132,2.13417703302824,1.78351381000883,2.33919979880532,3.29325172936576,2.68412837520744,182.111095456534,58.5527244438128,1.32167513193519,0.793351699990633,1.70630600428187,1.85789337488351,2.83508414908605,1.4117846723634,2.00140239460383,3.04361001780095,1.42358718463353,3.78807595865225,4.27269854960458,4.17808591286417,4.09424582950152,0.898819408654221,4.32276099749388,3.58454291857861,1.32767530667157,1.14248512609729,2.25415471346161,3.25842124552503,2.32742984601151,2.66516115583211,2.52946148497029,2.80459281161244,2.35498091762062,1.1105744752962,1.48226313543574,1.66845105716094,1.96558995113203,0.899448449539415,1.62288097110802,2.65294875727659,1.2731292589071,1.15078454980324,2.2698931748505,0.549122826376163,0,4.09355042435354,3.43241440426017,2.02063102357689,2.15276896226295,2.8946611281802,11.4546977903295,11.1799932944586,5.21487924614483,3.39490171550376,2.58159273117352,3.1826188913945,4.76087281772027,5.65887578787617,6.46304090835383,6.64394068946325,5.42146213435456,7.53771247692395,7.42545422023351,8.38964539772767,1.50791283939272,0,5.4094070032094,6.89841865761831,94.0826457328461,80.2900053156592,0,2.27223834483936,7.2566890465739,10.5418460960092,14.6487910458303,5.01834475700359,5.56996685205985,4.24614796183249,5.66734982344852,14.028281179743,11.4633455604492,89.6486472816842,20.2974321847824,1.42452482933804,1.30309567482861,36.6233672999029,2.65490276679926,1.21390318077491,0.302323556964751,0.754420319023592,1.47650946440386,3.07435147943927,1.55056975900933,2.18120237686503,2.49548164869305,3.16036757935816,0,1.03135543248187,43.2358299307311,5.58189391497062,5.82114077022395,4.28674070063185,3.72414490648775,12.664186049747,12.9993726275676,17.3545020995322,21.8244688499251,13.7690846061483,3.52845436887939,2.96795255294664,0.645857706783622,0.844380948994182,0.835606408021955,0.492422699235184,4.95517422270746,97.3482835555176,3.58828849675491,1.03193433981611,1.11116716421827,2.63715839806567,4.37421528707281,6.63456702298916,0.169978429993855,0.139951452323658,0.138199973804424,2.86401185404534,0.949007980743406,1.82987520414164,1.29606408986162,2.09088296014469,1.09181281873089,3.77620169877498,3.2234847732881,2.6175594198403,2.59229946583586,2.4853572523477,2.25477175473676,0.149516546043979,0.330916980914195,0.194451188344048,0.904118764344118,0.168956125490778,0.938857909166032,0.2604087696879,0.104859344425711,0.966336483304024,0.576060012515731,1.58005560314089,1.41907650703115,0.616265742988964,0.129920822977795,0.895133478337407,0.39736270956253,0.841368146639782,0.886137163047463,0.403865799792591,0.609654453239999,0.504130925684203,1.16949456887703,1.05833025804362,1.16876902181569,3.400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|short_description=p3@Rtn1 | |short_description=p3@Rtn1 | ||
}} | }} |
Revision as of 06:35, 14 November 2012
Short description: | p3@Rtn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rtn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -137bp_to_ENSMUST00000101331_5end |
EntrezGene: | Rtn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.79e-16 | 44 |
neurectodermal cell | 3.79e-16 | 44 |
neural cell | 9.42e-16 | 43 |
neuron | 2.47e-12 | 33 |
neuronal stem cell | 2.47e-12 | 33 |
neuroblast | 2.47e-12 | 33 |
electrically signaling cell | 2.47e-12 | 33 |
CNS neuron (sensu Vertebrata) | 7.92e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.92e-12 | 23 |
electrically responsive cell | 9.72e-11 | 39 |
electrically active cell | 9.72e-11 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.