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FFCP PHASE1:Mm9::chr1:134638327..134638383,-: Difference between revisions

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|id=chr1:134638327..134638383,-
|id=chr1:134638327..134638383,-
|ontology_enrichment_celltype=CL:0000221!1.57e-18!44;CL:0000133!1.57e-18!44;CL:0002319!1.63e-18!43;CL:0000540!4.36e-16!33;CL:0000047!4.36e-16!33;CL:0000031!4.36e-16!33;CL:0000404!4.36e-16!33;CL:0000055!2.41e-13!50;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39
|ontology_enrichment_celltype=CL:0000221!1.57e-18!44;CL:0000133!1.57e-18!44;CL:0002319!1.63e-18!43;CL:0000540!4.36e-16!33;CL:0000047!4.36e-16!33;CL:0000031!4.36e-16!33;CL:0000404!4.36e-16!33;CL:0000055!2.41e-13!50;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!1.30e-11!39;CL:0000211!1.30e-11!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.17e-19,44;CL:0000133,2.17e-19,44;CL:0002319,2.26e-19,43;CL:0000540,8.02e-17,33;CL:0000047,8.02e-17,33;CL:0000031,8.02e-17,33;CL:0000404,8.02e-17,33;CL:0000117,3.23e-13,23;CL:0000337,3.23e-13,23;CL:0000393,8.71e-13,39;CL:0000211,8.71e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0000073!2.07e-39!75;UBERON:0001016!2.07e-39!75;UBERON:0001017!1.17e-38!73;UBERON:0005743!1.17e-38!73;UBERON:0004121!1.39e-36!102;UBERON:0000924!1.39e-36!102;UBERON:0006601!1.39e-36!102;UBERON:0002346!1.11e-32!71;UBERON:0003075!1.11e-32!71;UBERON:0007284!1.11e-32!71;UBERON:0000033!6.97e-30!63;UBERON:0001049!1.57e-28!52;UBERON:0005068!1.57e-28!52;UBERON:0006241!1.57e-28!52;UBERON:0007135!1.57e-28!52;UBERON:0000955!8.78e-28!50;UBERON:0006238!8.78e-28!50;UBERON:0002616!3.77e-27!49;UBERON:0003056!1.87e-24!49;UBERON:0003080!9.17e-22!40;UBERON:0002780!4.77e-21!39;UBERON:0001890!4.77e-21!39;UBERON:0006240!4.77e-21!39;UBERON:0002020!5.94e-19!34;UBERON:0002791!1.96e-16!29;UBERON:0003528!1.96e-16!29;UBERON:0001893!1.96e-16!29;UBERON:0007811!6.68e-16!86;UBERON:0000153!3.35e-14!94;UBERON:0000956!3.28e-12!21;UBERON:0001869!3.28e-12!21;UBERON:0000203!3.28e-12!21;UBERON:0002619!4.18e-10!17;UBERON:0000468!1.42e-08!333;UBERON:0002021!2.85e-07!10;UBERON:0000411!2.85e-07!10;UBERON:0001950!2.85e-07!10;UBERON:0003076!3.34e-07!12;UBERON:0003057!3.34e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.44e-41,75;UBERON:0001017,1.50e-40,73;UBERON:0004121,2.67e-36,95;UBERON:0000924,2.67e-36,95;UBERON:0006601,2.67e-36,95;UBERON:0002346,2.03e-34,64;UBERON:0003075,2.03e-34,64;UBERON:0007284,2.03e-34,64;UBERON:0000073,2.07e-31,54;UBERON:0001049,6.69e-30,52;UBERON:0005068,6.69e-30,52;UBERON:0006241,6.69e-30,52;UBERON:0007135,6.69e-30,52;UBERON:0010371,3.10e-28,73;UBERON:0000955,8.47e-27,47;UBERON:0006238,8.47e-27,47;UBERON:0002616,3.81e-26,46;UBERON:0003056,1.29e-25,49;UBERON:0003080,8.66e-23,40;UBERON:0010314,2.30e-22,92;UBERON:0002780,4.90e-22,39;UBERON:0001890,4.90e-22,39;UBERON:0006240,4.90e-22,39;UBERON:0002020,7.80e-20,34;UBERON:0003528,3.46e-17,29;UBERON:0002791,3.46e-17,29;UBERON:0001893,3.46e-17,29;UBERON:0000956,9.47e-13,21;UBERON:0001869,9.47e-13,21;UBERON:0000203,9.47e-13,21;UBERON:0002619,1.54e-10,17;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10;UBERON:0003076,1.73e-07,12;UBERON:0003057,1.73e-07,12
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05690559,16.5988505281722,16.6702791949076,18.3097234992872,14.2752823143142,16.4834360321323,17.3694725758589,14.7433778525729,15.0854435235437,14.5446075867866,16.5694914960855,15.8103759097755,16.8383069704436,15.7318056670584,13.6796249947678,15.4816689784282,16.2731258780744,16.7275375555086,15.9577261448413,15.1415485972785,17.0430525304563,16.0112487114347,36.7221549568781,15.439486157397,17.8342974860088,8.7992632751668,7.50010825006353,11.5933917810211
|phase1_expression=20.979498970728,0.348975407639361,0,0,0,2.18243053485457,3.73780224952841,0,0,0,0,0,0,0,5.99597571268193,4.45445588257617,2.79824751251259,0.157731082679119,0,1.27316895539409,26.3634199468316,0,0,1.27993938234725,0.22940928106717,0,0.430761996159075,1.72376986148711,1.71021077510736,0.504060259519861,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,16.4302182313088,14.3896603211095,55.1412318663524,38.3026901176338,11.0589273084036,12.9377307928474,0,0,0,0,6.5902691185914,8.25075347643908,83.7590147958735,87.2835115798854,83.6657452628156,1.35537812827653,3.55717918444456,0,0,0.7104801149461,74.001227298046,81.070062422848,103.378543471552,102.334501255422,96.9598071829871,142.825492201902,121.698566064339,65.4100867807854,58.5615827921424,86.406565941342,203.714379848869,171.611782386492,159.904401119749,96.2769900430415,84.1686321142169,94.2853200707736,161.088590423797,101.297269805702,119.182633265912,90.450975740416,80.0128846090958,65.4262054846805,22.0363222599566,30.9087680836753,0,0,0,0,0.649776417447669,0,5.61777680527007,0,0,0,11.5491604216878,0,0,0,0.216491041011214,0,0,4.22480354960522,8.54495016035667,7.71899123137089,14.3992821215893,15.2232739156071,9.4552353874984,14.4693734930518,10.347806227942,1.50799909595611,0,1.44599356919912,0,1.7794353494215,0.441683036920787,0.969750506270444,0,190.893079651529,199.602711593223,2.81002760729451,0,0,0.127070227073065,177.35211705531,174.765230276715,82.0522919297005,154.529820650934,166.726478179376,184.30799552433,192.255896735293,1.42575109390443,0.248813941220186,0.505445516867349,44.1927897361595,9.88915366516548,21.380895712313,34.3918667928217,21.8521985861787,28.5753296435577,26.0070852178245,28.4853242661576,136.077973008722,0.215567992932842,0.945530400839096,1.23165786914764,1.7535658594206,0.834141747676794,2.089512999133,0.61734640922383,1.39323986772945,0,0,0,0,1.17263029990548,0.540186184383045,1.18372367792605,0.393528463494808,0.771335564436891,0.232533944750408,0.536546802799238,0,1.48103864922132,0.164167464079095,0.891756905004413,0.584799949701329,1.53685080703735,0.536825675041487,141.735425332222,108.255652223007,4.29544417878937,1.32225283331772,7.03851226766272,10.9151235774406,6.05677068213839,7.46229041106367,6.22658522765637,3.23383564391351,1.89811624617805,2.79988223030818,2.01068167040216,2.58643413653496,3.11942539390592,4.49409704327111,1.08069024937347,1.59313018603494,1.51734320762465,3.31320686568214,0,0.610953983535943,0.775809948670503,0.561086559122548,0.126473074248515,0.147610147979602,0,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0.369506380333209,3.97931964718018,0.814824882210129,0.678980343100753,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.345369963731791,0.144649058581512,0,0,0,0.827810238914197,217.867150613434,242.0421328129,0,1.00988370881749,43.5401342794434,35.9203644752907,79.9220805588684,26.7645053706858,46.1193255350556,57.1814592193441,45.7436092892631,49.3912399870117,68.7800733626951,129.171169201566,1.41940085208269,1.06839362200353,1.14020871547503,1.15479086080775,41.1509928853885,7.28341908464944,3.62788268357701,5.84675747243284,8.26845300066164,8.9156192903739,9.04499026088774,6.90714086007261,6.41695281092498,13.2735438333043,82.226514688499,11.3449097573006,122.21781846561,26.2889197285713,34.797485937561,43.08174404135,96.6504273350391,67.4234130535827,49.2001571600342,53.8902959932841,0.704015124191131,0.21183207086382,1.32317038832977,5.7710188529518,0.322928853391811,0.542816324353403,0.358117032009409,0.820704498725306,2.91480836629851,261.82052643884,14.0114122254239,0.619160603889667,0.555583582109135,1.31857919903284,6.28793447516716,12.3540213531522,0,0.139951452323658,0,2.86401185404534,8.06656783631895,6.70954241518601,3.88819226958485,2.92723614420256,2.18362563746178,2.29269388854195,3.2234847732881,1.30877970992015,1.68499465279331,0.621339313086926,0,1.04661582230785,1.32366792365678,2.91676782516071,1.16243841129958,1.520605129417,3.28600268208111,2.47388331203505,4.19437377702843,1.20792060413003,0.576060012515731,1.26404448251271,2.63542779877213,1.64337531463724,1.55904987573354,1.25318686967237,2.58285761215644,0.600977247599844,0.738447635872886,0.504832249740738,0.533447646584999,0.403304740547362,1.65678397257579,1.6356013078856,1.16876902181569,2.26730383615211,0,0,0,10.8186172658027,2.81523713176773,1.46521299413812,2.78678892802786,0.501572104035363,164.342786201566,160.193182304498,170.149967491501,102.596349859181,153.458484428624,142.014052709264,140.404680048216,146.354391047872,152.255849418693,177.074026619122,8.30298780673413,39.9024873401031,25.2685736516119,16.7743634777123,12.7864029203069,13.7882631337511,17.1129980407244,16.4828045791115,13.7995260124481,19.2049880940486,16.7296337927558,24.1441716974178,18.7283014939765,19.1435205690559,16.5988505281722,16.6702791949076,18.3097234992872,14.2752823143142,16.4834360321323,17.3694725758589,14.7433778525729,15.0854435235437,14.5446075867866,16.5694914960855,15.8103759097755,16.8383069704436,15.7318056670584,13.6796249947678,15.4816689784282,16.2731258780744,16.7275375555086,15.9577261448413,15.1415485972785,17.0430525304563,16.0112487114347,36.7221549568781,15.439486157397,17.8342974860088,8.7992632751668,7.50010825006353,11.5933917810211
|short_description=p1@Nfasc
|short_description=p1@Nfasc
}}
}}

Revision as of 21:13, 14 November 2012

Short description:p1@Nfasc
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nfasc_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000094569, ENSMUST00000163770, NM_001160317, NM_182716, uc007cpe.2, uc007cpf.2, uc007cpg.2_5end
EntrezGene:Nfasc
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nfasc

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B855.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C383.76
Mouse Granule cells, donor2.CNhs12357.11731-123E387.28
Mouse Granule cells, donor3.CNhs12108.11636-122C783.67
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C874.00
Mouse Microglia, donor2.CNhs12634.11736-123E881.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5103.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5102.33
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D996.96
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1142.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5121.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D265.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F258.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D686.41
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3203.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3171.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7159.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D496.28
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F484.17
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D894.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4161.09
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5101.30
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6119.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D690.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F680.01
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.43
Mouse Schwann, donor1.CNhs12507.11728-123D922.04
Mouse Schwann, donor2.CNhs12573.11746-123F930.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D615.22
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F514.47
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2190.89
cerebellum, neonate N30.CNhs11135.1395-42I2199.60
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A4177.35
corpus striatum, adult.CNhs10487.19-21D8174.77
corpus striatum, neonate N00.CNhs11226.630-43F182.05
cortex, adult.CNhs10473.12-14D5154.53
cortex, neonate N30.CNhs11107.1392-42F2166.73
diencephalon, adult.CNhs10482.20-12F2184.31
diencephalon, neonate N30.CNhs11201.1388-42B2192.26
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G444.19
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E221.38
eyeball, embryo E15.CNhs10593.426-16C934.39
eyeball, embryo E17.CNhs11023.1261-18D421.85
eyeball, neonate N00.CNhs11207.633-15C628.58
eyeball, neonate N01.CNhs11140.1532-43E726.01
eyeball, neonate N02.CNhs11205.1551-44G828.49
eyeball, neonate N16.CNhs11188.777-19A2136.08
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E8141.74
hippocampus, neonate N00.CNhs11228.627-43G1108.26
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D510.92
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C2217.87
medulla oblongata, neonate N30.CNhs11200.1396-42A3242.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E235.92
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E379.92
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.76
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D846.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D957.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D445.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D549.39
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D668.78
olfactory brain, adult.CNhs10489.18-22I9129.17
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E441.15
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E282.23
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G8122.22
pituitary gland, embryo E12.CNhs11018.346-16E626.29
pituitary gland, embryo E13.CNhs11009.370-44C734.80
pituitary gland, embryo E14.CNhs11037.398-44A543.08
pituitary gland, embryo E15.CNhs10592.427-16B996.65
pituitary gland, embryo E16.CNhs11036.449-43F667.42
pituitary gland, embryo E17.CNhs11039.1265-44F549.20
pituitary gland, neonate N00.CNhs11190.1308-22E953.89
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C9261.82
spleen, adult.CNhs10465.25-2G214.01
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H16.29
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E38.07
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1164.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2160.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3170.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7102.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4153.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5142.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6140.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7146.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8152.26
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9177.07
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C939.90
whole body, embryo E13.CNhs10512.372-23H225.27
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B112.79
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.14
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.81
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.04
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I536.72
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C217.83
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.17e-1944
neurectodermal cell2.17e-1944
neural cell2.26e-1943
neuron8.02e-1733
neuronal stem cell8.02e-1733
neuroblast8.02e-1733
electrically signaling cell8.02e-1733
CNS neuron (sensu Vertebrata)3.23e-1323
neuroblast (sensu Vertebrata)3.23e-1323
electrically responsive cell8.71e-1339
electrically active cell8.71e-1339

Uber anatomy
Ontology termp-valuen
nervous system2.44e-4175
central nervous system1.50e-4073
ectoderm-derived structure2.67e-3695
ectoderm2.67e-3695
presumptive ectoderm2.67e-3695
neurectoderm2.03e-3464
neural plate2.03e-3464
presumptive neural plate2.03e-3464
regional part of nervous system2.07e-3154
neural tube6.69e-3052
neural rod6.69e-3052
future spinal cord6.69e-3052
neural keel6.69e-3052
ecto-epithelium3.10e-2873
brain8.47e-2747
future brain8.47e-2747
regional part of brain3.81e-2646
pre-chordal neural plate1.29e-2549
anterior neural tube8.66e-2340
structure with developmental contribution from neural crest2.30e-2292
regional part of forebrain4.90e-2239
forebrain4.90e-2239
future forebrain4.90e-2239
gray matter7.80e-2034
brain grey matter3.46e-1729
regional part of telencephalon3.46e-1729
telencephalon3.46e-1729
cerebral cortex9.47e-1321
cerebral hemisphere9.47e-1321
pallium9.47e-1321
regional part of cerebral cortex1.54e-1017
occipital lobe1.46e-0710
visual cortex1.46e-0710
neocortex1.46e-0710
posterior neural tube1.73e-0712
chordal neural plate1.73e-0712







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