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FFCP PHASE1:Mm9::chr6:58781507..58781523,+: Difference between revisions

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|id=chr6:58781507..58781523,+
|id=chr6:58781507..58781523,+
|ontology_enrichment_celltype=CL:0000117!5.89e-10!23;CL:0000337!5.89e-10!23
|ontology_enrichment_celltype=CL:0000117!5.89e-10!23;CL:0000337!5.89e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.79e-10,23;CL:0000337,2.79e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!7.97e-15!34;UBERON:0001049!2.02e-14!52;UBERON:0005068!2.02e-14!52;UBERON:0006241!2.02e-14!52;UBERON:0007135!2.02e-14!52;UBERON:0000955!1.30e-13!50;UBERON:0006238!1.30e-13!50;UBERON:0000073!1.35e-13!75;UBERON:0001016!1.35e-13!75;UBERON:0001017!2.14e-13!73;UBERON:0005743!2.14e-13!73;UBERON:0002616!3.78e-13!49;UBERON:0002791!2.02e-12!29;UBERON:0003528!2.02e-12!29;UBERON:0001893!2.02e-12!29;UBERON:0000033!1.23e-11!63;UBERON:0007811!1.58e-11!86;UBERON:0003080!2.34e-10!40;UBERON:0000956!3.30e-10!21;UBERON:0001869!3.30e-10!21;UBERON:0000203!3.30e-10!21;UBERON:0002780!5.99e-10!39;UBERON:0001890!5.99e-10!39;UBERON:0006240!5.99e-10!39;UBERON:0002346!1.01e-09!71;UBERON:0003075!1.01e-09!71;UBERON:0007284!1.01e-09!71;UBERON:0000153!2.37e-09!94;UBERON:0004121!3.36e-09!102;UBERON:0000924!3.36e-09!102;UBERON:0006601!3.36e-09!102;UBERON:0003056!6.10e-09!49;UBERON:0002021!4.39e-08!10;UBERON:0000411!4.39e-08!10;UBERON:0001950!4.39e-08!10;UBERON:0000064!4.55e-08!99;UBERON:0002619!5.79e-08!17
|ontology_enrichment_uberon=UBERON:0002020!7.97e-15!34;UBERON:0001049!2.02e-14!52;UBERON:0005068!2.02e-14!52;UBERON:0006241!2.02e-14!52;UBERON:0007135!2.02e-14!52;UBERON:0000955!1.30e-13!50;UBERON:0006238!1.30e-13!50;UBERON:0000073!1.35e-13!75;UBERON:0001016!1.35e-13!75;UBERON:0001017!2.14e-13!73;UBERON:0005743!2.14e-13!73;UBERON:0002616!3.78e-13!49;UBERON:0002791!2.02e-12!29;UBERON:0003528!2.02e-12!29;UBERON:0001893!2.02e-12!29;UBERON:0000033!1.23e-11!63;UBERON:0007811!1.58e-11!86;UBERON:0003080!2.34e-10!40;UBERON:0000956!3.30e-10!21;UBERON:0001869!3.30e-10!21;UBERON:0000203!3.30e-10!21;UBERON:0002780!5.99e-10!39;UBERON:0001890!5.99e-10!39;UBERON:0006240!5.99e-10!39;UBERON:0002346!1.01e-09!71;UBERON:0003075!1.01e-09!71;UBERON:0007284!1.01e-09!71;UBERON:0000153!2.37e-09!94;UBERON:0004121!3.36e-09!102;UBERON:0000924!3.36e-09!102;UBERON:0006601!3.36e-09!102;UBERON:0003056!6.10e-09!49;UBERON:0002021!4.39e-08!10;UBERON:0000411!4.39e-08!10;UBERON:0001950!4.39e-08!10;UBERON:0000064!4.55e-08!99;UBERON:0002619!5.79e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.60e-15,54;UBERON:0002020,4.19e-15,34;UBERON:0001049,2.19e-14,52;UBERON:0005068,2.19e-14,52;UBERON:0006241,2.19e-14,52;UBERON:0007135,2.19e-14,52;UBERON:0001016,3.70e-13,75;UBERON:0001017,6.01e-13,73;UBERON:0003528,1.30e-12,29;UBERON:0002791,1.30e-12,29;UBERON:0001893,1.30e-12,29;UBERON:0010314,3.75e-12,92;UBERON:0000955,5.86e-12,47;UBERON:0006238,5.86e-12,47;UBERON:0002346,8.35e-12,64;UBERON:0003075,8.35e-12,64;UBERON:0007284,8.35e-12,64;UBERON:0002616,1.69e-11,46;UBERON:0004121,2.10e-10,95;UBERON:0000924,2.10e-10,95;UBERON:0006601,2.10e-10,95;UBERON:0003080,2.45e-10,40;UBERON:0000956,2.64e-10,21;UBERON:0001869,2.64e-10,21;UBERON:0000203,2.64e-10,21;UBERON:0002780,6.43e-10,39;UBERON:0001890,6.43e-10,39;UBERON:0006240,6.43e-10,39;UBERON:0010371,1.40e-09,73;UBERON:0003056,1.03e-08,49;UBERON:0002021,2.45e-08,10;UBERON:0000411,2.45e-08,10;UBERON:0001950,2.45e-08,10;UBERON:0002619,5.51e-08,17
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|phase1_expression=1.12104192973356,0.697950815278722,3.18499467572675,7.56160528267075,4.00716583957078,2.01455126294268,0.934450562382103,10.0716192284429,9.01047821770667,7.72412936862578,0.856089841127525,0.957265907944037,17.8048759128454,13.7250031797826,0.999329285446988,2.02475267389826,0,3.15462165358238,3.83920414096069,2.54633791078818,3.31668831589172,0,0,1.27993938234725,2.52350209173887,4.59385571292016,1.29228598847722,1.72376986148711,1.71021077510736,1.26015064879965,0.886922042621219,0,0.61506478758457,0,1.73310971850765,1.32987716286794,1.83752420636132,1.67412652294763,0,1.0470474879476,1.76469446409304,1.36609096991689,1.94204141212461,0,0,0.183546752161682,0.782391344348039,1.96222640742402,0.878744730937887,1.36100929351998,3.21968769738334,1.43752564364972,4.19456515144341,13.7818806982155,8.73843877770406,2.31533492432352,0.573066879877513,2.06268836910977,2.22548106945558,3.70293685490423,5.07065122804943,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,0.7104801149461,1.49800055259202,0.384218305321555,8.39885859698669,8.10035629990144,8.62332341540666,6.85562362569129,5.96345060569357,2.57230678351403,3.64212789869298,6.43453150627015,5.50579404996943,9.95961237064464,9.67721159514334,3.29715719325485,4.57438218012048,1.04182674111352,8.09630697104005,7.31591393041184,8.70950012327818,7.66034322231536,6.69146899755784,3.72798891650601,3.86203585999239,1.43585964202892,2.89864488701678,1.72084775396277,0,0.539703191637817,0.649776417447669,0.448026887097336,2.10666630197628,0.340860645156116,1.03914401841148,0.35333957451034,2.53518155598025,0,0,0,0.649473123033642,3.04031838570118,4.04419556011827,1.37020655662872,3.88406825470758,1.63286352971307,1.04091196059682,0.304465478312141,1.38369298353635,0.301445281105245,1.17588707135705,0.753999547978053,2.71914464507811,2.74738778147832,0,1.7794353494215,2.42925670306433,0,0,15.2246014446005,7.33063473847093,1.78819938646014,1.07833612055328,0.599902730993408,0.254140454146129,4.79330046095433,5.94750783664214,2.63874139437015,13.3844726548053,12.0186264945255,5.61027720310812,4.2182728397617,1.12023300235348,0.497627882440372,1.26361379216837,6.10281382070775,0.520481771850815,0.689706313300419,1.0803727788321,0.90422890701429,1.97305847538851,1.15302348256365,2.34254311399322,6.72628763921441,0.431135985865684,0.945530400839096,0.879755620819744,1.09597866213787,0.278047249225598,0.696504333044333,1.02891068203972,0.199034266818493,0,0.257347907114715,0.852490498186778,1.24275463521301,0.938104239924385,1.98068267607116,3.31442629819294,2.36117078096885,3.70241070929708,2.79040733700489,4.02410102099429,3.26942958628075,4.27855609775049,3.11918181750281,3.4859588104718,5.55559952216263,3.07370161407471,3.08674763148855,9.67333763394985,2.88132914661996,0.660837565967596,1.05780226665418,0.213288250535234,0.696710015581316,1.41754207454303,2.62188582010345,2.2237804384487,2.09248188723815,3.32170343081158,4.77626968699632,2.76468729680296,2.58643413653496,4.28920991662064,0,2.37751854862164,0.597423819763102,0.948339504765408,0.571242563048644,2.25415471346161,1.22190796707189,1.16371492300575,1.54298803758701,1.64414996523069,1.77132177575523,2.66897837330337,2.59134044235781,0.592905254174298,0.83422552858047,0.982794975566015,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,1.43848068725405,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.538192240565737,1.92977408545347,0.739012760666419,0.757965647081939,1.46668478797823,0.509235257325564,0.938760993154008,1.34005005953453,2.14239276797412,1.17080188714679,0.630540576424764,1.10732344824387,1.43509291791738,1.14704320301017,0.863424909329478,0.723245292907558,0,1.63171705145613,2.45882136509518,1.65562047782839,4.65596710964597,5.27452589664914,0.327869890753351,3.53459298086122,0.94652465824877,1.56175497718655,1.93881057959519,1.19484398976276,0.668396022247182,0.849229592366497,0.809621403349789,1.75353514746787,1.97643888973262,5.78378369559253,2.41298144854057,0.890328018336276,0.977321756121456,1.64970122972535,0,0.971122544619926,0.302323556964751,0.754420319023592,1.18120757152309,0.307435147943927,0.775284879504663,1.09060118843252,2.49548164869305,1.58018378967908,2.10837217149998,0,6.46835250932197,1.08036656418786,0.646793418913773,0.428674070063185,2.30542303734956,0.891844088010353,1.81003922662333,0.608929898229199,0.938686832254841,2.1183207086382,0.441056796109924,0.98931751764888,1.13025098687134,1.02531972377865,0.238744688006273,0.656563598980245,2.04036585640896,6.86073617438886,1.36696704638282,1.44470807574256,0,0.376736914009382,0.820165366326151,1.14389086603261,1.18984900995699,1.53946597556024,1.79659965945751,0.954670618015114,0.474503990371703,2.03319467126849,1.40406943068342,1.88179466413022,0.87345025498471,1.88810084938749,1.90102948168273,2.6175594198403,1.03691978633434,0.621339313086926,0,1.04661582230785,0.66183396182839,0.777804753376191,0.258319646955462,0.675824501963113,0.469428954583016,0.781226309063701,1.78260885523708,0.483168241652012,1.44015003128933,2.21207784439725,0.608175645870493,0.821687657318618,1.42912905275575,1.43221356533985,3.3775830312815,2.04332264183947,2.21534290761866,3.12995994839258,2.209997392995,2.21817607301049,3.70339946811059,3.84847366561318,4.09069157635491,3.40095575422817,1.55390167361845,1.52513556236109,2.51826924546118,1.54551675225752,0.93841237725591,0.183151624267265,0.428736758158132,1.50471631210609,15.8130515932779,11.5081309126794,17.7597609166213,21.997207339992,18.4972280338073,12.8416962556249,16.8755625057951,17.1122057225204,15.406841905463,16.5683299760582,0.31136204275253,0,0.682934423016537,2.18796045361465,0.628839487883947,0.919217542250071,2.22246727801615,1.23621034343337,2.56735367673452,2.02157769411038,2.5347929989024,2.45214243801899,1.49826411951812,2.04880487695582,2.5845961030026,3.33405583898152,2.78122382267653,2.89363830695558,1.23625770240992,2.94397840268795,2.74295401908332,1.59728225543404,3.09967046931517,3.34296758254356,2.63506265162926,1.86152137361688,3.29270351170991,2.89376682581627,2.58027816307137,5.61142271657738,3.08451047122853,1.97008964751127,1.22769312950907,2.01417893541756,1.15743966588685,2.49810577937946,0.935726433781634,1.71896843238639,3.25190164517034,2.20591419119516,2.78241402744506
|short_description=p2@Herc3
|short_description=p2@Herc3
}}
}}

Revision as of 22:10, 13 November 2012

Short description:p2@Herc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Herc3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 10bp_to_ENSMUST00000122981_5end
EntrezGene:Herc3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Herc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D513.38
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.27
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.21
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.79e-1023
neuroblast (sensu Vertebrata)2.79e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.60e-1554
gray matter4.19e-1534
neural tube2.19e-1452
neural rod2.19e-1452
future spinal cord2.19e-1452
neural keel2.19e-1452
nervous system3.70e-1375
central nervous system6.01e-1373
brain grey matter1.30e-1229
regional part of telencephalon1.30e-1229
telencephalon1.30e-1229
structure with developmental contribution from neural crest3.75e-1292
brain5.86e-1247
future brain5.86e-1247
neurectoderm8.35e-1264
neural plate8.35e-1264
presumptive neural plate8.35e-1264
regional part of brain1.69e-1146
ectoderm-derived structure2.10e-1095
ectoderm2.10e-1095
presumptive ectoderm2.10e-1095
anterior neural tube2.45e-1040
cerebral cortex2.64e-1021
cerebral hemisphere2.64e-1021
pallium2.64e-1021
regional part of forebrain6.43e-1039
forebrain6.43e-1039
future forebrain6.43e-1039
ecto-epithelium1.40e-0973
pre-chordal neural plate1.03e-0849
occipital lobe2.45e-0810
visual cortex2.45e-0810
neocortex2.45e-0810
regional part of cerebral cortex5.51e-0817







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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