FFCP PHASE1:Mm9::chr4:149050175..149050233,-: Difference between revisions
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|id=chr4:149050175..149050233,- | |id=chr4:149050175..149050233,- | ||
|ontology_enrichment_celltype=CL:0000540!1.09e-12!33;CL:0000047!1.09e-12!33;CL:0000031!1.09e-12!33;CL:0000404!1.09e-12!33;CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000393!1.14e-11!39;CL:0000211!1.14e-11!39;CL:0002319!4.42e-10!43;CL:0000221!6.65e-10!44;CL:0000133!6.65e-10!44;CL:0000055!6.65e-09!50 | |ontology_enrichment_celltype=CL:0000540!1.09e-12!33;CL:0000047!1.09e-12!33;CL:0000031!1.09e-12!33;CL:0000404!1.09e-12!33;CL:0000117!1.60e-12!23;CL:0000337!1.60e-12!23;CL:0000393!1.14e-11!39;CL:0000211!1.14e-11!39;CL:0002319!4.42e-10!43;CL:0000221!6.65e-10!44;CL:0000133!6.65e-10!44;CL:0000055!6.65e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-13,23;CL:0000337,3.55e-13,23;CL:0000540,5.70e-13,33;CL:0000047,5.70e-13,33;CL:0000031,5.70e-13,33;CL:0000404,5.70e-13,33;CL:0000393,1.35e-11,39;CL:0000211,1.35e-11,39;CL:0002319,9.05e-10,43;CL:0000221,1.35e-09,44;CL:0000133,1.35e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.46e-25!73;UBERON:0005743!7.46e-25!73;UBERON:0000073!2.81e-24!75;UBERON:0001016!2.81e-24!75;UBERON:0002346!6.42e-22!71;UBERON:0003075!6.42e-22!71;UBERON:0007284!6.42e-22!71;UBERON:0001049!1.39e-21!52;UBERON:0005068!1.39e-21!52;UBERON:0006241!1.39e-21!52;UBERON:0007135!1.39e-21!52;UBERON:0000955!5.45e-21!50;UBERON:0006238!5.45e-21!50;UBERON:0004121!8.31e-21!102;UBERON:0000924!8.31e-21!102;UBERON:0006601!8.31e-21!102;UBERON:0002616!1.53e-20!49;UBERON:0000033!8.08e-19!63;UBERON:0002020!2.80e-18!34;UBERON:0003080!3.82e-17!40;UBERON:0003056!6.15e-17!49;UBERON:0002780!1.26e-16!39;UBERON:0001890!1.26e-16!39;UBERON:0006240!1.26e-16!39;UBERON:0002791!4.68e-16!29;UBERON:0003528!4.68e-16!29;UBERON:0001893!4.68e-16!29;UBERON:0000956!2.66e-12!21;UBERON:0001869!2.66e-12!21;UBERON:0000203!2.66e-12!21;UBERON:0002619!8.61e-10!17;UBERON:0000468!8.03e-08!333;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000153!3.34e-07!94;UBERON:0007811!7.42e-07!86 | |ontology_enrichment_uberon=UBERON:0001017!7.46e-25!73;UBERON:0005743!7.46e-25!73;UBERON:0000073!2.81e-24!75;UBERON:0001016!2.81e-24!75;UBERON:0002346!6.42e-22!71;UBERON:0003075!6.42e-22!71;UBERON:0007284!6.42e-22!71;UBERON:0001049!1.39e-21!52;UBERON:0005068!1.39e-21!52;UBERON:0006241!1.39e-21!52;UBERON:0007135!1.39e-21!52;UBERON:0000955!5.45e-21!50;UBERON:0006238!5.45e-21!50;UBERON:0004121!8.31e-21!102;UBERON:0000924!8.31e-21!102;UBERON:0006601!8.31e-21!102;UBERON:0002616!1.53e-20!49;UBERON:0000033!8.08e-19!63;UBERON:0002020!2.80e-18!34;UBERON:0003080!3.82e-17!40;UBERON:0003056!6.15e-17!49;UBERON:0002780!1.26e-16!39;UBERON:0001890!1.26e-16!39;UBERON:0006240!1.26e-16!39;UBERON:0002791!4.68e-16!29;UBERON:0003528!4.68e-16!29;UBERON:0001893!4.68e-16!29;UBERON:0000956!2.66e-12!21;UBERON:0001869!2.66e-12!21;UBERON:0000203!2.66e-12!21;UBERON:0002619!8.61e-10!17;UBERON:0000468!8.03e-08!333;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0000153!3.34e-07!94;UBERON:0007811!7.42e-07!86 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-25,73;UBERON:0001016,1.45e-24,75;UBERON:0000073,2.99e-24,54;UBERON:0002346,1.51e-23,64;UBERON:0003075,1.51e-23,64;UBERON:0007284,1.51e-23,64;UBERON:0001049,8.86e-23,52;UBERON:0005068,8.86e-23,52;UBERON:0006241,8.86e-23,52;UBERON:0007135,8.86e-23,52;UBERON:0000955,3.31e-20,47;UBERON:0006238,3.31e-20,47;UBERON:0004121,6.71e-20,95;UBERON:0000924,6.71e-20,95;UBERON:0006601,6.71e-20,95;UBERON:0002616,9.65e-20,46;UBERON:0002020,2.81e-19,34;UBERON:0010314,3.94e-19,92;UBERON:0003080,4.50e-18,40;UBERON:0010371,8.18e-18,73;UBERON:0003056,8.50e-18,49;UBERON:0002780,1.59e-17,39;UBERON:0001890,1.59e-17,39;UBERON:0006240,1.59e-17,39;UBERON:0003528,6.39e-17,29;UBERON:0002791,6.39e-17,29;UBERON:0001893,6.39e-17,29;UBERON:0000956,6.09e-13,21;UBERON:0001869,6.09e-13,21;UBERON:0000203,6.09e-13,21;UBERON:0002619,2.78e-10,17;UBERON:0002021,4.75e-08,10;UBERON:0000411,4.75e-08,10;UBERON:0001950,4.75e-08,10;UBERON:0000922,4.16e-07,320 | |||
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| ||
|short_description=p3@Pik3cd | |short_description=p3@Pik3cd | ||
}} | }} |
Revision as of 02:40, 15 November 2012
Short description: | p3@Pik3cd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pik3cd_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000137430, NM_001164051, uc008vwr.1, uc008vwy.1_5end |
EntrezGene: | Pik3cd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.55e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.55e-13 | 23 |
neuron | 5.70e-13 | 33 |
neuronal stem cell | 5.70e-13 | 33 |
neuroblast | 5.70e-13 | 33 |
electrically signaling cell | 5.70e-13 | 33 |
electrically responsive cell | 1.35e-11 | 39 |
electrically active cell | 1.35e-11 | 39 |
neural cell | 9.05e-10 | 43 |
ectodermal cell | 1.35e-09 | 44 |
neurectodermal cell | 1.35e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.76e-25 | 73 |
nervous system | 1.45e-24 | 75 |
regional part of nervous system | 2.99e-24 | 54 |
neurectoderm | 1.51e-23 | 64 |
neural plate | 1.51e-23 | 64 |
presumptive neural plate | 1.51e-23 | 64 |
neural tube | 8.86e-23 | 52 |
neural rod | 8.86e-23 | 52 |
future spinal cord | 8.86e-23 | 52 |
neural keel | 8.86e-23 | 52 |
brain | 3.31e-20 | 47 |
future brain | 3.31e-20 | 47 |
ectoderm-derived structure | 6.71e-20 | 95 |
ectoderm | 6.71e-20 | 95 |
presumptive ectoderm | 6.71e-20 | 95 |
regional part of brain | 9.65e-20 | 46 |
gray matter | 2.81e-19 | 34 |
structure with developmental contribution from neural crest | 3.94e-19 | 92 |
anterior neural tube | 4.50e-18 | 40 |
ecto-epithelium | 8.18e-18 | 73 |
pre-chordal neural plate | 8.50e-18 | 49 |
regional part of forebrain | 1.59e-17 | 39 |
forebrain | 1.59e-17 | 39 |
future forebrain | 1.59e-17 | 39 |
brain grey matter | 6.39e-17 | 29 |
regional part of telencephalon | 6.39e-17 | 29 |
telencephalon | 6.39e-17 | 29 |
cerebral cortex | 6.09e-13 | 21 |
cerebral hemisphere | 6.09e-13 | 21 |
pallium | 6.09e-13 | 21 |
regional part of cerebral cortex | 2.78e-10 | 17 |
occipital lobe | 4.75e-08 | 10 |
visual cortex | 4.75e-08 | 10 |
neocortex | 4.75e-08 | 10 |
embryo | 4.16e-07 | 320 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.