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FFCP PHASE1:Mm9::chr9:91260594..91260612,-: Difference between revisions

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|id=chr9:91260594..91260612,-
|id=chr9:91260594..91260612,-
|ontology_enrichment_celltype=CL:0000117!3.24e-15!23;CL:0000337!3.24e-15!23;CL:0002319!1.77e-13!43;CL:0000221!7.48e-13!44;CL:0000133!7.48e-13!44;CL:0000055!1.05e-09!50;CL:0000540!6.00e-09!33;CL:0000047!6.00e-09!33;CL:0000031!6.00e-09!33;CL:0000404!6.00e-09!33
|ontology_enrichment_celltype=CL:0000117!3.24e-15!23;CL:0000337!3.24e-15!23;CL:0002319!1.77e-13!43;CL:0000221!7.48e-13!44;CL:0000133!7.48e-13!44;CL:0000055!1.05e-09!50;CL:0000540!6.00e-09!33;CL:0000047!6.00e-09!33;CL:0000031!6.00e-09!33;CL:0000404!6.00e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-17,23;CL:0000337,2.98e-17,23;CL:0002319,8.00e-14,43;CL:0000221,3.03e-13,44;CL:0000133,3.03e-13,44;CL:0000540,2.03e-09,33;CL:0000047,2.03e-09,33;CL:0000031,2.03e-09,33;CL:0000404,2.03e-09,33;CL:0000393,8.40e-07,39;CL:0000211,8.40e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.97e-30!102;UBERON:0000924!4.97e-30!102;UBERON:0006601!4.97e-30!102;UBERON:0000073!5.00e-29!75;UBERON:0001016!5.00e-29!75;UBERON:0001017!1.02e-28!73;UBERON:0005743!1.02e-28!73;UBERON:0000033!4.57e-27!63;UBERON:0001049!1.91e-26!52;UBERON:0005068!1.91e-26!52;UBERON:0006241!1.91e-26!52;UBERON:0007135!1.91e-26!52;UBERON:0002346!9.54e-26!71;UBERON:0003075!9.54e-26!71;UBERON:0007284!9.54e-26!71;UBERON:0000955!1.15e-24!50;UBERON:0006238!1.15e-24!50;UBERON:0002616!7.41e-24!49;UBERON:0003056!3.37e-21!49;UBERON:0003080!1.85e-17!40;UBERON:0002780!5.09e-17!39;UBERON:0001890!5.09e-17!39;UBERON:0006240!5.09e-17!39;UBERON:0002020!1.92e-15!34;UBERON:0000153!2.73e-14!94;UBERON:0007811!3.62e-14!86;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0003076!8.65e-10!12;UBERON:0003057!8.65e-10!12;UBERON:0000956!8.34e-07!21;UBERON:0001869!8.34e-07!21;UBERON:0000203!8.34e-07!21
|ontology_enrichment_uberon=UBERON:0004121!4.97e-30!102;UBERON:0000924!4.97e-30!102;UBERON:0006601!4.97e-30!102;UBERON:0000073!5.00e-29!75;UBERON:0001016!5.00e-29!75;UBERON:0001017!1.02e-28!73;UBERON:0005743!1.02e-28!73;UBERON:0000033!4.57e-27!63;UBERON:0001049!1.91e-26!52;UBERON:0005068!1.91e-26!52;UBERON:0006241!1.91e-26!52;UBERON:0007135!1.91e-26!52;UBERON:0002346!9.54e-26!71;UBERON:0003075!9.54e-26!71;UBERON:0007284!9.54e-26!71;UBERON:0000955!1.15e-24!50;UBERON:0006238!1.15e-24!50;UBERON:0002616!7.41e-24!49;UBERON:0003056!3.37e-21!49;UBERON:0003080!1.85e-17!40;UBERON:0002780!5.09e-17!39;UBERON:0001890!5.09e-17!39;UBERON:0006240!5.09e-17!39;UBERON:0002020!1.92e-15!34;UBERON:0000153!2.73e-14!94;UBERON:0007811!3.62e-14!86;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0003076!8.65e-10!12;UBERON:0003057!8.65e-10!12;UBERON:0000956!8.34e-07!21;UBERON:0001869!8.34e-07!21;UBERON:0000203!8.34e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.15e-31,95;UBERON:0000924,9.15e-31,95;UBERON:0006601,9.15e-31,95;UBERON:0002346,2.46e-30,64;UBERON:0003075,2.46e-30,64;UBERON:0007284,2.46e-30,64;UBERON:0001017,3.67e-30,73;UBERON:0000073,3.72e-30,54;UBERON:0001016,1.13e-29,75;UBERON:0001049,3.21e-28,52;UBERON:0005068,3.21e-28,52;UBERON:0006241,3.21e-28,52;UBERON:0007135,3.21e-28,52;UBERON:0010371,4.34e-27,73;UBERON:0000955,1.20e-23,47;UBERON:0006238,1.20e-23,47;UBERON:0002616,9.33e-23,46;UBERON:0003056,2.32e-22,49;UBERON:0003080,4.28e-18,40;UBERON:0002780,1.35e-17,39;UBERON:0001890,1.35e-17,39;UBERON:0006240,1.35e-17,39;UBERON:0002020,8.94e-16,34;UBERON:0010314,5.35e-15,92;UBERON:0003528,1.38e-11,29;UBERON:0002791,1.38e-11,29;UBERON:0001893,1.38e-11,29;UBERON:0003076,5.14e-11,12;UBERON:0003057,5.14e-11,12;UBERON:0002420,1.76e-07,8;UBERON:0007245,1.76e-07,8;UBERON:0010009,1.76e-07,8;UBERON:0010011,1.76e-07,8;UBERON:0000454,1.76e-07,8;UBERON:0001894,2.87e-07,10;UBERON:0006222,2.87e-07,10
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5453679787327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.2391344348039,1.30815093828268,10.1055644057857,23.9148775861369,25.6175151574413,18.6878333674463,0,0,0,0,0,0,48.3536341454439,49.7251520515711,79.8627568417786,45.0663227651946,34.6824970483344,0,0,0,19.1744070731779,18.8266969607562,4.56234294157302,4.59020190327748,3.57552434297349,30.564655331207,43.5111025674679,2.9397791811589,3.1629005436018,12.8690630125403,18.7196997698961,34.8586432972562,24.2698322544865,147.976414833277,152.052463667205,132.311996121417,30.9893128891533,10.1297269805702,12.835052813252,40.9533733808398,63.640141317199,78.6605661382768,0.605809546665472,1.058001841495,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0,0.884610551949874,0,0,0.969750506270444,0,308.005398456148,325.689629094923,0,0,0,0,9.73639156131348,17.8425235099264,10.6806199295935,5.73620256634512,5.37002460393694,51.1158589616518,28.7167035629931,0,0.124406970610093,0,3.15662783829711,17.566259799965,11.9549094305406,10.6236656585156,8.59017461663576,7.21186891004075,9.22418786050918,8.80796210861451,6.20888089773638,0.431135985865684,1.13463648100692,0.703804496655795,0.876782929710299,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7247873767705,21.9186824367876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,20.5504755184374,20.5120451536356,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,32.1321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.36175842301515,16.0254373687866,19.5331612511959,14.1462443120851,9.3990323830405,17.4801441250029,13.8221177305782,7.61162372786498,0.23467170806371,0,0,10.7176064411962,1.93757312035087,0.72375509913787,0.835606408021955,1.14898629821543,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.887943813496259,0,0.167884616364078,0,0,0,0,0,2.82375921308533,1.38097570952153,0.572895513439397,3.09335728218638,0.685082519770642,1.5107877947794,4.05013500139084,1.80128481289688,6.34399372577886,1.03552062350364,41.722513728839,28.3307660114732,21.8539015365292,14.5864030240976,15.5113740344707,15.2590112013512,6.44515510624684,8.24140228955577,6.09746498224449,4.80124702351215,9.12525479604863,9.80856975207596,8.5213771797593,8.70742072706222,7.58148190214095,8.09699275181225,9.85016770531272,8.87382414133043,10.3021475200827,11.9231125308862,10.6289468239479,9.22874192028555,9.53744759789284,11.3370204973216,9.31682866111773,10.1537529470012,11.5244622909847,11.3119975918272,13.0371949292027,12.906272248128,8.06718123244384,8.96390789617628,9.82154503607254,7.43696837692637,8.48789088317022,18.7357933453459,6.55008503647143,7.95022899978704,4.59091996965224,3.30887128679273,2.31867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5453679787327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.2391344348039,1.30815093828268,10.1055644057857,23.9148775861369,25.6175151574413,18.6878333674463,0,0,0,0,0,0,48.3536341454439,49.7251520515711,79.8627568417786,45.0663227651946,34.6824970483344,0,0,0,19.1744070731779,18.8266969607562,4.56234294157302,4.59020190327748,3.57552434297349,30.564655331207,43.5111025674679,2.9397791811589,3.1629005436018,12.8690630125403,18.7196997698961,34.8586432972562,24.2698322544865,147.976414833277,152.052463667205,132.311996121417,30.9893128891533,10.1297269805702,12.835052813252,40.9533733808398,63.640141317199,78.6605661382768,0.605809546665472,1.058001841495,0,0,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0.304465478312141,0.461230994512117,0,0.23517741427141,0,0,0,0.884610551949874,0,0,0.969750506270444,0,308.005398456148,325.689629094923,0,0,0,0,9.73639156131348,17.8425235099264,10.6806199295935,5.73620256634512,5.37002460393694,51.1158589616518,28.7167035629931,0,0.124406970610093,0,3.15662783829711,17.566259799965,11.9549094305406,10.6236656585156,8.59017461663576,7.21186891004075,9.22418786050918,8.80796210861451,6.20888089773638,0.431135985865684,1.13463648100692,0.703804496655795,0.876782929710299,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7247873767705,21.9186824367876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,20.5504755184374,20.5120451536356,0,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,32.1321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.36175842301515,16.0254373687866,19.5331612511959,14.1462443120851,9.3990323830405,17.4801441250029,13.8221177305782,7.61162372786498,0.23467170806371,0,0,10.7176064411962,1.93757312035087,0.72375509913787,0.835606408021955,1.14898629821543,0,13.1651964427462,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.887943813496259,0,0.167884616364078,0,0,0,0,0,2.82375921308533,1.38097570952153,0.572895513439397,3.09335728218638,0.685082519770642,1.5107877947794,4.05013500139084,1.80128481289688,6.34399372577886,1.03552062350364,41.722513728839,28.3307660114732,21.8539015365292,14.5864030240976,15.5113740344707,15.2590112013512,6.44515510624684,8.24140228955577,6.09746498224449,4.80124702351215,9.12525479604863,9.80856975207596,8.5213771797593,8.70742072706222,7.58148190214095,8.09699275181225,9.85016770531272,8.87382414133043,10.3021475200827,11.9231125308862,10.6289468239479,9.22874192028555,9.53744759789284,11.3370204973216,9.31682866111773,10.1537529470012,11.5244622909847,11.3119975918272,13.0371949292027,12.906272248128,8.06718123244384,8.96390789617628,9.82154503607254,7.43696837692637,8.48789088317022,18.7357933453459,6.55008503647143,7.95022899978704,4.59091996965224,3.30887128679273,2.31867835620421
|short_description=p1@Zic1
|short_description=p1@Zic1
}}
}}

Revision as of 13:14, 14 November 2012

Short description:p1@Zic1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zic1_5end
Coexpression cluster:MCL_coexpression_mm9:819
Association with transcript: 0bp_to_ENSMUST00000034927, uc009raf.1_5end
EntrezGene:Zic1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zic1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B778.24
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C348.35
Mouse Granule cells, donor2.CNhs12357.11731-123E349.73
Mouse Granule cells, donor3.CNhs12108.11636-122C779.86
Mouse Meningeal cells, donor1.CNhs12132.11716-123C645.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D134.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C819.17
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F334.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4147.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4152.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8132.31
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E430.99
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E178.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2308.01
cerebellum, neonate N30.CNhs11135.1395-42I2325.69
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F251.12
diencephalon, neonate N30.CNhs11201.1388-42B228.72
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C617.57
eyeball, embryo E14.CNhs10521.399-16E211.95
eyeball, embryo E15.CNhs10593.426-16C910.62
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C67.21
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G121.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A320.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I932.13
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E616.03
pituitary gland, embryo E13.CNhs11009.370-44C719.53
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F617.48
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C310.72
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I841.72
whole body, embryo E12.CNhs10587.857-27C928.33
whole body, embryo E13.CNhs10512.372-23H221.85
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B115.51
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.44
whole body, embryo E17.5.CNhs10513.490-9F98.49
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B42.32





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.98e-1723
neuroblast (sensu Vertebrata)2.98e-1723
neural cell8.00e-1443
ectodermal cell3.03e-1344
neurectodermal cell3.03e-1344
neuron2.03e-0933
neuronal stem cell2.03e-0933
neuroblast2.03e-0933
electrically signaling cell2.03e-0933
electrically responsive cell8.40e-0739
electrically active cell8.40e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.15e-3195
ectoderm9.15e-3195
presumptive ectoderm9.15e-3195
neurectoderm2.46e-3064
neural plate2.46e-3064
presumptive neural plate2.46e-3064
central nervous system3.67e-3073
regional part of nervous system3.72e-3054
nervous system1.13e-2975
neural tube3.21e-2852
neural rod3.21e-2852
future spinal cord3.21e-2852
neural keel3.21e-2852
ecto-epithelium4.34e-2773
brain1.20e-2347
future brain1.20e-2347
regional part of brain9.33e-2346
pre-chordal neural plate2.32e-2249
anterior neural tube4.28e-1840
regional part of forebrain1.35e-1739
forebrain1.35e-1739
future forebrain1.35e-1739
gray matter8.94e-1634
structure with developmental contribution from neural crest5.35e-1592
brain grey matter1.38e-1129
regional part of telencephalon1.38e-1129
telencephalon1.38e-1129
posterior neural tube5.14e-1112
chordal neural plate5.14e-1112
basal ganglion1.76e-078
nuclear complex of neuraxis1.76e-078
aggregate regional part of brain1.76e-078
collection of basal ganglia1.76e-078
cerebral subcortex1.76e-078
diencephalon2.87e-0710
future diencephalon2.87e-0710







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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