FFCP PHASE1:Mm9::chr1:93355134..93355140,+: Difference between revisions
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|id=chr1:93355134..93355140,+ | |id=chr1:93355134..93355140,+ | ||
|ontology_enrichment_celltype=CL:0000355!3.46e-17!9;CL:0002250!1.95e-13!3;CL:0002494!2.37e-13!3;CL:0000737!2.37e-13!3;CL:0000746!2.37e-13!3;CL:0000513!2.37e-13!3;CL:0000222!4.32e-10!7;CL:0002563!7.44e-08!9;CL:0002251!7.44e-08!9;CL:0000680!6.49e-07!6;CL:0000183!6.49e-07!6;CL:0000187!6.49e-07!6;CL:0000056!6.49e-07!6 | |ontology_enrichment_celltype=CL:0000355!3.46e-17!9;CL:0002250!1.95e-13!3;CL:0002494!2.37e-13!3;CL:0000737!2.37e-13!3;CL:0000746!2.37e-13!3;CL:0000513!2.37e-13!3;CL:0000222!4.32e-10!7;CL:0002563!7.44e-08!9;CL:0002251!7.44e-08!9;CL:0000680!6.49e-07!6;CL:0000183!6.49e-07!6;CL:0000187!6.49e-07!6;CL:0000056!6.49e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,9.18e-20,9;CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1;CL:0000222,4.05e-07,7 | |||
|ontology_enrichment_disease=DOID:0060100!2.69e-14!3;DOID:4045!2.69e-14!3;DOID:0050686!2.26e-07!6 | |ontology_enrichment_disease=DOID:0060100!2.69e-14!3;DOID:4045!2.69e-14!3;DOID:0050686!2.26e-07!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.18e-33,3;DOID:4045,2.18e-33,3;DOID:0050686,4.12e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.46e-17!9;UBERON:0002036!3.46e-17!9;UBERON:0002385!3.46e-17!9;UBERON:0000486!3.46e-17!9;UBERON:0001015!3.46e-17!9;UBERON:0004290!3.46e-17!9;UBERON:0003082!3.46e-17!9;UBERON:0000383!2.01e-15!10;UBERON:0002329!5.62e-14!11;UBERON:0003077!5.62e-14!11;UBERON:0003059!5.62e-14!11;UBERON:0007282!5.62e-14!11;UBERON:0009618!5.62e-14!11;UBERON:0007285!5.62e-14!11;UBERON:0000914!7.30e-09!17;UBERON:0003350!7.44e-08!9;UBERON:0004808!7.44e-08!9;UBERON:0001277!7.44e-08!9 | |ontology_enrichment_uberon=UBERON:0001134!3.46e-17!9;UBERON:0002036!3.46e-17!9;UBERON:0002385!3.46e-17!9;UBERON:0000486!3.46e-17!9;UBERON:0001015!3.46e-17!9;UBERON:0004290!3.46e-17!9;UBERON:0003082!3.46e-17!9;UBERON:0000383!2.01e-15!10;UBERON:0002329!5.62e-14!11;UBERON:0003077!5.62e-14!11;UBERON:0003059!5.62e-14!11;UBERON:0007282!5.62e-14!11;UBERON:0009618!5.62e-14!11;UBERON:0007285!5.62e-14!11;UBERON:0000914!7.30e-09!17;UBERON:0003350!7.44e-08!9;UBERON:0004808!7.44e-08!9;UBERON:0001277!7.44e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.18e-20,9;UBERON:0002036,9.18e-20,9;UBERON:0002385,9.18e-20,9;UBERON:0000486,9.18e-20,9;UBERON:0007503,9.18e-20,9;UBERON:0001015,9.18e-20,9;UBERON:0002329,9.18e-20,9;UBERON:0003082,9.18e-20,9;UBERON:0003059,9.18e-20,9;UBERON:0007282,9.18e-20,9;UBERON:0004290,9.18e-20,9;UBERON:0009618,9.18e-20,9;UBERON:0000383,7.67e-18,10;UBERON:0007524,2.88e-16,11;UBERON:0003077,2.88e-16,11;UBERON:0007285,2.88e-16,11;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1 | |||
|phase1_expression=0,0,0,0,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,1.67412652294763,7.0320181007142,3.66466620781659,110.587519749831,8.87959130445979,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,1.67412652294763,7.0320181007142,3.66466620781659,110.587519749831,8.87959130445979,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:93355134..93355140,+ | |short_description=p@chr1:93355134..93355140,+ | ||
}} | }} |
Revision as of 22:46, 13 November 2012
Short description: | p@chr1:93355134..93355140, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:93355134..93355140, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 9.18e-20 | 9 |
lining cell | 3.34e-12 | 1 |
meso-epithelial cell | 3.34e-12 | 1 |
endothelial cell | 3.34e-12 | 1 |
endothelial cell of sinusoid | 3.34e-12 | 1 |
endothelial cell of hepatic sinusoid | 3.34e-12 | 1 |
mesodermal cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.18e-20 | 9 |
striated muscle tissue | 9.18e-20 | 9 |
muscle tissue | 9.18e-20 | 9 |
multilaminar epithelium | 9.18e-20 | 9 |
epithelial vesicle | 9.18e-20 | 9 |
musculature | 9.18e-20 | 9 |
somite | 9.18e-20 | 9 |
myotome | 9.18e-20 | 9 |
presomitic mesoderm | 9.18e-20 | 9 |
presumptive segmental plate | 9.18e-20 | 9 |
dermomyotome | 9.18e-20 | 9 |
trunk paraxial mesoderm | 9.18e-20 | 9 |
musculature of body | 7.67e-18 | 10 |
dense mesenchyme tissue | 2.88e-16 | 11 |
paraxial mesoderm | 2.88e-16 | 11 |
presumptive paraxial mesoderm | 2.88e-16 | 11 |
bile duct | 3.34e-12 | 1 |
hepatic sinusoid | 3.34e-12 | 1 |
parenchyma | 3.34e-12 | 1 |
abdomen blood vessel | 3.34e-12 | 1 |
sinusoid | 3.34e-12 | 1 |
digestive system duct | 3.34e-12 | 1 |
abdominal segment blood vessel | 3.34e-12 | 1 |
trunk blood vessel | 3.34e-12 | 1 |
liver parenchyma | 3.34e-12 | 1 |
liver lobule | 3.34e-12 | 1 |
biliary system | 3.34e-12 | 1 |
biliary tree | 3.34e-12 | 1 |
biliary bud | 3.34e-12 | 1 |
hepatic duct | 3.34e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.18e-33 | 3 |
muscle cancer | 2.18e-33 | 3 |
organ system cancer | 4.12e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.