Personal tools

FFCP PHASE1:Mm9::chr5:115879558..115879577,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr5:115879558..115879577,+
|id=chr5:115879558..115879577,+
|ontology_enrichment_celltype=CL:0000117!1.41e-18!23;CL:0000337!1.41e-18!23;CL:0000540!5.70e-14!33;CL:0000047!5.70e-14!33;CL:0000031!5.70e-14!33;CL:0000404!5.70e-14!33;CL:0000221!8.60e-11!44;CL:0000133!8.60e-11!44;CL:0000393!1.50e-10!39;CL:0000211!1.50e-10!39;CL:0002319!2.15e-10!43;CL:0000055!9.82e-08!50
|ontology_enrichment_celltype=CL:0000117!1.41e-18!23;CL:0000337!1.41e-18!23;CL:0000540!5.70e-14!33;CL:0000047!5.70e-14!33;CL:0000031!5.70e-14!33;CL:0000404!5.70e-14!33;CL:0000221!8.60e-11!44;CL:0000133!8.60e-11!44;CL:0000393!1.50e-10!39;CL:0000211!1.50e-10!39;CL:0002319!2.15e-10!43;CL:0000055!9.82e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.11e-45,23;CL:0000337,6.11e-45,23;CL:0000540,2.10e-30,33;CL:0000047,2.10e-30,33;CL:0000031,2.10e-30,33;CL:0000404,2.10e-30,33;CL:0000393,2.97e-25,39;CL:0000211,2.97e-25,39;CL:0002609,4.15e-24,6;CL:0002319,1.29e-22,43;CL:0000221,4.95e-22,44;CL:0000133,4.95e-22,44;CL:0002608,9.65e-13,3;CL:0002321,1.12e-12,70;CL:0000120,4.65e-12,3;CL:0002613,5.52e-12,3;CL:0000723,5.16e-09,91;CL:0000048,5.16e-09,91;CL:0000034,2.94e-08,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.73e-23!73;UBERON:0005743!1.73e-23!73;UBERON:0000033!2.24e-23!63;UBERON:0000073!3.45e-22!75;UBERON:0001016!3.45e-22!75;UBERON:0001049!3.45e-22!52;UBERON:0005068!3.45e-22!52;UBERON:0006241!3.45e-22!52;UBERON:0007135!3.45e-22!52;UBERON:0002346!4.72e-22!71;UBERON:0003075!4.72e-22!71;UBERON:0007284!4.72e-22!71;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0003056!8.48e-21!49;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!5.96e-20!49;UBERON:0002020!7.43e-19!34;UBERON:0003080!2.57e-17!40;UBERON:0002780!1.12e-16!39;UBERON:0001890!1.12e-16!39;UBERON:0006240!1.12e-16!39;UBERON:0002791!3.52e-15!29;UBERON:0003528!3.52e-15!29;UBERON:0001893!3.52e-15!29;UBERON:0007811!2.42e-12!86;UBERON:0000153!5.65e-12!94;UBERON:0000956!5.18e-10!21;UBERON:0001869!5.18e-10!21;UBERON:0000203!5.18e-10!21;UBERON:0002619!2.52e-07!17
|ontology_enrichment_uberon=UBERON:0001017!1.73e-23!73;UBERON:0005743!1.73e-23!73;UBERON:0000033!2.24e-23!63;UBERON:0000073!3.45e-22!75;UBERON:0001016!3.45e-22!75;UBERON:0001049!3.45e-22!52;UBERON:0005068!3.45e-22!52;UBERON:0006241!3.45e-22!52;UBERON:0007135!3.45e-22!52;UBERON:0002346!4.72e-22!71;UBERON:0003075!4.72e-22!71;UBERON:0007284!4.72e-22!71;UBERON:0004121!1.16e-21!102;UBERON:0000924!1.16e-21!102;UBERON:0006601!1.16e-21!102;UBERON:0003056!8.48e-21!49;UBERON:0000955!1.03e-20!50;UBERON:0006238!1.03e-20!50;UBERON:0002616!5.96e-20!49;UBERON:0002020!7.43e-19!34;UBERON:0003080!2.57e-17!40;UBERON:0002780!1.12e-16!39;UBERON:0001890!1.12e-16!39;UBERON:0006240!1.12e-16!39;UBERON:0002791!3.52e-15!29;UBERON:0003528!3.52e-15!29;UBERON:0001893!3.52e-15!29;UBERON:0007811!2.42e-12!86;UBERON:0000153!5.65e-12!94;UBERON:0000956!5.18e-10!21;UBERON:0001869!5.18e-10!21;UBERON:0000203!5.18e-10!21;UBERON:0002619!2.52e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.68e-26,34;UBERON:0001017,1.02e-23,73;UBERON:0001016,5.46e-23,75;UBERON:0000073,6.72e-22,54;UBERON:0001049,1.95e-20,52;UBERON:0005068,1.95e-20,52;UBERON:0006241,1.95e-20,52;UBERON:0007135,1.95e-20,52;UBERON:0003528,2.19e-20,29;UBERON:0002791,2.19e-20,29;UBERON:0001893,2.19e-20,29;UBERON:0000955,7.65e-18,47;UBERON:0006238,7.65e-18,47;UBERON:0004121,2.28e-17,95;UBERON:0000924,2.28e-17,95;UBERON:0006601,2.28e-17,95;UBERON:0002346,5.46e-16,64;UBERON:0003075,5.46e-16,64;UBERON:0007284,5.46e-16,64;UBERON:0002616,5.50e-16,46;UBERON:0002780,1.54e-14,39;UBERON:0001890,1.54e-14,39;UBERON:0006240,1.54e-14,39;UBERON:0003080,4.09e-14,40;UBERON:0010371,1.31e-13,73;UBERON:0000369,2.02e-12,5;UBERON:0002435,2.02e-12,5;UBERON:0000204,2.02e-12,5;UBERON:0010082,2.02e-12,5;UBERON:0002420,1.49e-11,8;UBERON:0007245,1.49e-11,8;UBERON:0010009,1.49e-11,8;UBERON:0010011,1.49e-11,8;UBERON:0000454,1.49e-11,8;UBERON:0000956,4.27e-11,21;UBERON:0001869,4.27e-11,21;UBERON:0000203,4.27e-11,21;UBERON:0003056,4.48e-11,49;UBERON:0010314,4.15e-10,92;UBERON:0001954,2.09e-09,7;UBERON:0003022,2.09e-09,7;UBERON:0002421,2.09e-09,7;UBERON:0000349,2.09e-09,7;UBERON:0002600,2.09e-09,7;UBERON:0001896,1.03e-07,2;UBERON:0002298,1.03e-07,2;UBERON:0005290,1.03e-07,2;UBERON:0010096,1.03e-07,2;UBERON:0000025,1.66e-07,114;UBERON:0003076,3.37e-07,12;UBERON:0003057,3.37e-07,12;UBERON:0001948,4.78e-07,5;UBERON:0002315,4.78e-07,5;UBERON:0004111,8.61e-07,122
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,2.64495489636016,3.1691570175309,0,0,0,0,0,0.898800331555214,0,6.32506635081714,5.94026128659439,7.99234853135252,1.71390590642282,0.662605622854841,5.63457676388789,4.40889166683887,6.43453150627015,1.10115880999389,0.893811366596314,0.614426133024974,4.08847491963601,4.29991924931325,2.6045668527838,0.279182999001381,1.12552522006336,0.763991238884051,1.17851434189467,0.996601765593721,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.457500602818626,4.27224797183739,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.60281927134286,0.680364991513279,0.512454881139399,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,5.55684906848136,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,2.25415471346161,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0.315508219416257,0,0,0,0,0.849229592366497,0,0,0.790575555893047,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.627264888043406,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.415149390336707,0.399024873401031,0.512200817262403,0,0.838452650511929,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.516919220600519,0,0.579421629724277,0.77163688185482,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0,0.376437521661322,0.169229215783353,0.548783918618318,0,0.543216455383447,0,0.830445126869219,0.29551344712669,0,0,0.385813221962283,0.749431733813838,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,4.85559506063035,2.64495489636016,3.1691570175309,0,0,0,0,0,0.898800331555214,0,6.32506635081714,5.94026128659439,7.99234853135252,1.71390590642282,0.662605622854841,5.63457676388789,4.40889166683887,6.43453150627015,1.10115880999389,0.893811366596314,0.614426133024974,4.08847491963601,4.29991924931325,2.6045668527838,0.279182999001381,1.12552522006336,0.763991238884051,1.17851434189467,0.996601765593721,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0,0,0,0.748953197024114,0.457500602818626,4.27224797183739,0.347648640384553,0.511430914660661,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.60281927134286,0.680364991513279,0.512454881139399,0.468508622798644,0.258703370739016,0.431135985865684,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,0.210289948564127,5.55684906848136,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,2.25415471346161,0.203651327845314,0.193952487167626,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0.315508219416257,0,0,0,0,0.849229592366497,0,0,0.790575555893047,1.28528526568723,0.141940085208269,0.35613120733451,0.325773918707152,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0,0,0,0,0.16488625294148,0,0.301564624640779,0,0.328281799490123,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0.627264888043406,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0.460325236507177,0.572895513439397,0.515559547031063,0,0.755393897389701,1.35004500046361,0.45032120322422,0.453142408984205,0.51776031175182,0.415149390336707,0.399024873401031,0.512200817262403,0,0.838452650511929,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.516919220600519,0,0.579421629724277,0.77163688185482,0.412085900803307,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0,0.376437521661322,0.169229215783353,0.548783918618318,0,0.543216455383447,0,0.830445126869219,0.29551344712669,0,0,0.385813221962283,0.749431733813838,0.467863216890817,0.644613162144895,0.191288332068843,0,0
|short_description=p9@Msi1
|short_description=p9@Msi1
}}
}}

Revision as of 17:41, 13 November 2012

Short description:p9@Msi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Msi1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -30bp_to_ENSMUST00000150779_5end
EntrezGene:Msi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Msi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.86
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.63
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G15.56
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter4.68e-2634
central nervous system1.02e-2373
nervous system5.46e-2375
regional part of nervous system6.72e-2254
neural tube1.95e-2052
neural rod1.95e-2052
future spinal cord1.95e-2052
neural keel1.95e-2052
brain grey matter2.19e-2029
regional part of telencephalon2.19e-2029
telencephalon2.19e-2029
brain7.65e-1847
future brain7.65e-1847
ectoderm-derived structure2.28e-1795
ectoderm2.28e-1795
presumptive ectoderm2.28e-1795
neurectoderm5.46e-1664
neural plate5.46e-1664
presumptive neural plate5.46e-1664
regional part of brain5.50e-1646
regional part of forebrain1.54e-1439
forebrain1.54e-1439
future forebrain1.54e-1439
anterior neural tube4.09e-1440
ecto-epithelium1.31e-1373
corpus striatum2.02e-125
striatum2.02e-125
ventral part of telencephalon2.02e-125
future corpus striatum2.02e-125
basal ganglion1.49e-118
nuclear complex of neuraxis1.49e-118
aggregate regional part of brain1.49e-118
collection of basal ganglia1.49e-118
cerebral subcortex1.49e-118
cerebral cortex4.27e-1121
cerebral hemisphere4.27e-1121
pallium4.27e-1121
pre-chordal neural plate4.48e-1149
structure with developmental contribution from neural crest4.15e-1092
Ammon's horn2.09e-097
lobe parts of cerebral cortex2.09e-097
hippocampal formation2.09e-097
limbic system2.09e-097
limbic lobe2.09e-097
medulla oblongata1.03e-072
brainstem1.03e-072
myelencephalon1.03e-072
future myelencephalon1.03e-072
tube1.66e-07114
posterior neural tube3.37e-0712
chordal neural plate3.37e-0712
regional part of spinal cord4.78e-075
gray matter of spinal cord4.78e-075
anatomical conduit8.61e-07122







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:115879558..115879577,%2B&oldid=2268542"