FFCP PHASE1:Mm9::chr11:87569069..87569090,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=387160|HGNC=|MCL_coexpression_id=36|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123700,uc007kul.1_5end|description=CAGE_peak_1_at_Mir142_5end|id=chr11:87569069..87569090,+|ontology_enrichment_celltype=CL:0000988!1.62e-14!32;CL:0002032!1.62e-14!32;CL:0000037!1.62e-14!32;CL:0000566!1.62e-14!32;CL:0000837!1.62e-14!32;CL:0002031!5.26e-13!25;CL:0000049!1.52e-08!19;CL:0000838!6.77e-08!12;CL:0000738!7.56e-08!17;CL:0002087!7.56e-08!17;CL:0000763!1.91e-07!16;CL:0000084!2.12e-07!11;CL:0000827!2.12e-07!11;CL:0000542!3.60e-07!13;CL:0000051!3.60e-07!13;CL:0002320!8.73e-07!46;CL:0000134!8.73e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,1.19e-14,32;CL:0002032,1.19e-14,32;CL:0000037,1.19e-14,32;CL:0000837,1.19e-14,32;CL:0002031,3.99e-13,25;CL:0000049,1.28e-08,19;CL:0000838,5.80e-08,12;CL:0000738,6.49e-08,17;CL:0002087,6.49e-08,17;CL:0000763,1.65e-07,16;CL:0000084,1.84e-07,11;CL:0000827,1.84e-07,11;CL:0000542,3.14e-07,13;CL:0000051,3.14e-07,13;CL:0002320,5.69e-07,46;CL:0000134,5.69e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.61e-19!48;UBERON:0002405!5.38e-18!70;UBERON:0002390!1.38e-17!45;UBERON:0003061!1.38e-17!45;UBERON:0004177!6.33e-12!29;UBERON:0005057!5.95e-11!51;UBERON:0003408!2.20e-09!24;UBERON:0003081!3.45e-09!88;UBERON:0002370!4.05e-09!23;UBERON:0000974!4.05e-09!23;UBERON:0004807!4.05e-09!23;UBERON:0005058!4.05e-09!23;UBERON:0003351!4.05e-09!23;UBERON:0009113!4.05e-09!23;UBERON:0003295!4.05e-09!23;UBERON:0009722!4.05e-09!23;UBERON:0005562!4.05e-09!23;UBERON:0007690!4.05e-09!23;UBERON:0006562!1.00e-08!24;UBERON:0001557!1.00e-08!24;UBERON:0001042!1.00e-08!24;UBERON:0008814!1.00e-08!24;UBERON:0009145!1.00e-08!24;UBERON:0001041!1.12e-08!92;UBERON:0000077!1.21e-08!97;UBERON:0000926!2.03e-08!193;UBERON:0004120!2.03e-08!193;UBERON:0006603!2.03e-08!193;UBERON:0002384!8.73e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.94e-19,48;UBERON:0002405,1.94e-19,48;UBERON:0002390,4.24e-18,45;UBERON:0003061,4.24e-18,45;UBERON:0004177,2.25e-12,29;UBERON:0005057,2.25e-12,29;UBERON:0000077,1.16e-10,35;UBERON:0003408,8.64e-10,24;UBERON:0002370,1.60e-09,23;UBERON:0000974,1.60e-09,23;UBERON:0004807,1.60e-09,23;UBERON:0005058,1.60e-09,23;UBERON:0003351,1.60e-09,23;UBERON:0009113,1.60e-09,23;UBERON:0003295,1.60e-09,23;UBERON:0009722,1.60e-09,23;UBERON:0005562,1.60e-09,23;UBERON:0007690,1.60e-09,23;UBERON:0006562,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0001041,6.39e-09,80;UBERON:0003081,7.63e-09,87;UBERON:0000926,1.52e-07,120;UBERON:0004120,1.52e-07,120;UBERON:0006603,1.52e-07,120;UBERON:0001004,4.12e-07,42;UBERON:0002384,5.69e-07,46;UBERON:0000065,7.47e-07,41|phase1_expression=0.480446541314382,0,0,0,0,0,0,329.780968069786,253.982854761607,469.533439801919,284.050609286113,385.778160901447,387.940854024112,356.063299052576,122.584392348164,148.616846264132,117.526395525529,375.399976776303,434.652754530192,454.096927423892,31.5510606460469,194.709555304936,171.608261464281,57.2772873600396,49.3229954294416,0.57423196411502,0,0.215471232685889,8.93110071444957,5.54466285471848,8.20402889424627,263.537729485747,160.531909559573,206.02618532007,0,0.166234645358492,0,262.000800841304,175.800452517855,379.03119063703,735.877591526799,437.149110373405,335.973164297558,0,0,0,1.56478268869608,0,0,0,0.279972843250725,0,243.788126601891,293.771667514594,262.489257130264,0.514518872071894,5.15760191889762,2.06268836910977,0.202316460859598,0,0,0,0,21.5975932147536,23.7327927016074,17.0515227587064,11.9840044207362,9.60545763303886,0.311068836925433,0.675029691658453,0.210324961351382,0.285650984403804,0.883474163806454,0.244981598429908,0,1.83843757322004,2.20231761998777,0.255374676170375,0.921639199537461,0.527545150920775,0.182975287204819,0,0.837548997004143,2.8138130501584,1.83357897332172,0.883885756421003,1.56608848879013,0.186399445825301,3.02904773332736,0.226714680320357,2.31891590961342,2.58127163094416,0,0.539703191637817,0.649776417447669,0.896053774194671,48.4533249454544,0,0,0,0,0,0,0,0,0,0,44.1891614512762,524.090276501876,14.5473296283528,10.0621489524359,10.9607572192371,6.91846491768175,3.91878865436819,6.23220147819235,1.25666591329675,0.741584903203122,12.1463459812726,199.037374188722,31.3827688897974,121.462835153216,148.371827459378,5.59175283654366,0.585561594023094,0.41889341362691,27.8448190177365,143.89796453161,65.9893004092748,112.965431867955,0.898743836428936,4.11750542536764,0.251308704225729,1.39059456153821,3.3243009452943,1.45451631191692,1.1356888414743,2.74966282395854,126.024261228024,4.29628689337247,4.41927897361595,1.43132487258974,1.37941262660084,1.80062129805349,6.78171680260718,1.29269348387523,0.896796041993948,1.03071897015702,1.03481348295606,1.07783996466421,1.89106080167819,2.28736461413134,2.19195732427575,6.95118123063995,2.78601733217733,6.37924622864625,4.77682240364384,84.2655824775882,67.16780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| ||
|EntrezGene=387160 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123700,uc007kul.1_5end | |||
|description=CAGE_peak_1_at_Mir142_5end | |||
|id=chr11:87569069..87569090,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.62e-14!32;CL:0002032!1.62e-14!32;CL:0000037!1.62e-14!32;CL:0000566!1.62e-14!32;CL:0000837!1.62e-14!32;CL:0002031!5.26e-13!25;CL:0000049!1.52e-08!19;CL:0000838!6.77e-08!12;CL:0000738!7.56e-08!17;CL:0002087!7.56e-08!17;CL:0000763!1.91e-07!16;CL:0000084!2.12e-07!11;CL:0000827!2.12e-07!11;CL:0000542!3.60e-07!13;CL:0000051!3.60e-07!13;CL:0002320!8.73e-07!46;CL:0000134!8.73e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.19e-14,32;CL:0002032,1.19e-14,32;CL:0000037,1.19e-14,32;CL:0000837,1.19e-14,32;CL:0002031,3.99e-13,25;CL:0000049,1.28e-08,19;CL:0000838,5.80e-08,12;CL:0000738,6.49e-08,17;CL:0002087,6.49e-08,17;CL:0000763,1.65e-07,16;CL:0000084,1.84e-07,11;CL:0000827,1.84e-07,11;CL:0000542,3.14e-07,13;CL:0000051,3.14e-07,13;CL:0002320,5.69e-07,46;CL:0000134,5.69e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.61e-19!48;UBERON:0002405!5.38e-18!70;UBERON:0002390!1.38e-17!45;UBERON:0003061!1.38e-17!45;UBERON:0004177!6.33e-12!29;UBERON:0005057!5.95e-11!51;UBERON:0003408!2.20e-09!24;UBERON:0003081!3.45e-09!88;UBERON:0002370!4.05e-09!23;UBERON:0000974!4.05e-09!23;UBERON:0004807!4.05e-09!23;UBERON:0005058!4.05e-09!23;UBERON:0003351!4.05e-09!23;UBERON:0009113!4.05e-09!23;UBERON:0003295!4.05e-09!23;UBERON:0009722!4.05e-09!23;UBERON:0005562!4.05e-09!23;UBERON:0007690!4.05e-09!23;UBERON:0006562!1.00e-08!24;UBERON:0001557!1.00e-08!24;UBERON:0001042!1.00e-08!24;UBERON:0008814!1.00e-08!24;UBERON:0009145!1.00e-08!24;UBERON:0001041!1.12e-08!92;UBERON:0000077!1.21e-08!97;UBERON:0000926!2.03e-08!193;UBERON:0004120!2.03e-08!193;UBERON:0006603!2.03e-08!193;UBERON:0002384!8.73e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.94e-19,48;UBERON:0002405,1.94e-19,48;UBERON:0002390,4.24e-18,45;UBERON:0003061,4.24e-18,45;UBERON:0004177,2.25e-12,29;UBERON:0005057,2.25e-12,29;UBERON:0000077,1.16e-10,35;UBERON:0003408,8.64e-10,24;UBERON:0002370,1.60e-09,23;UBERON:0000974,1.60e-09,23;UBERON:0004807,1.60e-09,23;UBERON:0005058,1.60e-09,23;UBERON:0003351,1.60e-09,23;UBERON:0009113,1.60e-09,23;UBERON:0003295,1.60e-09,23;UBERON:0009722,1.60e-09,23;UBERON:0005562,1.60e-09,23;UBERON:0007690,1.60e-09,23;UBERON:0006562,4.13e-09,24;UBERON:0001557,4.13e-09,24;UBERON:0001042,4.13e-09,24;UBERON:0008814,4.13e-09,24;UBERON:0009145,4.13e-09,24;UBERON:0001041,6.39e-09,80;UBERON:0003081,7.63e-09,87;UBERON:0000926,1.52e-07,120;UBERON:0004120,1.52e-07,120;UBERON:0006603,1.52e-07,120;UBERON:0001004,4.12e-07,42;UBERON:0002384,5.69e-07,46;UBERON:0000065,7.47e-07,41 | |||
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| |||
|short_description=p1@Mir142 | |||
}} |
Revision as of 21:21, 12 September 2013
Short description: | p1@Mir142 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir142_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000123700, uc007kul.1_5end |
EntrezGene: | Mir142 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.19e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.19e-14 | 32 |
hematopoietic stem cell | 1.19e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.19e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 3.99e-13 | 25 |
common myeloid progenitor | 1.28e-08 | 19 |
lymphoid lineage restricted progenitor cell | 5.80e-08 | 12 |
leukocyte | 6.49e-08 | 17 |
nongranular leukocyte | 6.49e-08 | 17 |
myeloid cell | 1.65e-07 | 16 |
T cell | 1.84e-07 | 11 |
pro-T cell | 1.84e-07 | 11 |
lymphocyte | 3.14e-07 | 13 |
common lymphoid progenitor | 3.14e-07 | 13 |
connective tissue cell | 5.69e-07 | 46 |
mesenchymal cell | 5.69e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.94e-19 | 48 |
immune system | 1.94e-19 | 48 |
hematopoietic system | 4.24e-18 | 45 |
blood island | 4.24e-18 | 45 |
hemopoietic organ | 2.25e-12 | 29 |
immune organ | 2.25e-12 | 29 |
mixed endoderm/mesoderm-derived structure | 1.16e-10 | 35 |
gland of gut | 8.64e-10 | 24 |
thymus | 1.60e-09 | 23 |
neck | 1.60e-09 | 23 |
respiratory system epithelium | 1.60e-09 | 23 |
hemolymphoid system gland | 1.60e-09 | 23 |
pharyngeal epithelium | 1.60e-09 | 23 |
thymic region | 1.60e-09 | 23 |
pharyngeal gland | 1.60e-09 | 23 |
entire pharyngeal arch endoderm | 1.60e-09 | 23 |
thymus primordium | 1.60e-09 | 23 |
early pharyngeal endoderm | 1.60e-09 | 23 |
pharynx | 4.13e-09 | 24 |
upper respiratory tract | 4.13e-09 | 24 |
chordate pharynx | 4.13e-09 | 24 |
pharyngeal arch system | 4.13e-09 | 24 |
pharyngeal region of foregut | 4.13e-09 | 24 |
foregut | 6.39e-09 | 80 |
lateral plate mesoderm | 7.63e-09 | 87 |
mesoderm | 1.52e-07 | 120 |
mesoderm-derived structure | 1.52e-07 | 120 |
presumptive mesoderm | 1.52e-07 | 120 |
respiratory system | 4.12e-07 | 42 |
connective tissue | 5.69e-07 | 46 |
respiratory tract | 7.47e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.