FFCP PHASE1:Mm9::chr19:34291747..34291758,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76630|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=-165bp_to_ENSMUST00000125232_5end|description=CAGE_peak_13_at_Stambpl1_5end|id=chr19:34291747..34291758,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000893,4.99e-07,6;CL:0002489,4.99e-07,6;CL:0000898,4.99e-07,6;CL:0000809,4.99e-07,6;CL:0000810,4.99e-07,6;CL:0000895,4.99e-07,6;CL:0000808,4.99e-07,6;CL:0000894,4.99e-07,6;CL:0000806,4.99e-07,6;CL:0000807,4.99e-07,6;CL:0000805,4.99e-07,6;CL:0002425,4.99e-07,6;CL:0002436,4.99e-07,6;CL:0002427,4.99e-07,6;CL:0002428,4.99e-07,6;CL:0002429,4.99e-07,6;CL:0002433,4.99e-07,6;CL:0002431,4.99e-07,6;CL:0002432,4.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!5.42e-19!29;UBERON:0005057!1.43e-15!51;UBERON:0002370!2.43e-14!23;UBERON:0000974!2.43e-14!23;UBERON:0004807!2.43e-14!23;UBERON:0005058!2.43e-14!23;UBERON:0003351!2.43e-14!23;UBERON:0009113!2.43e-14!23;UBERON:0003295!2.43e-14!23;UBERON:0009722!2.43e-14!23;UBERON:0005562!2.43e-14!23;UBERON:0007690!2.43e-14!23;UBERON:0006562!1.51e-13!24;UBERON:0003408!1.51e-13!24;UBERON:0001557!1.51e-13!24;UBERON:0001042!1.51e-13!24;UBERON:0008814!1.51e-13!24;UBERON:0009145!1.51e-13!24;UBERON:0002390!1.93e-12!45;UBERON:0003061!1.93e-12!45;UBERON:0000072!1.59e-11!27;UBERON:0002193!2.96e-11!48;UBERON:0002405!3.82e-11!70;UBERON:0000063!5.64e-09!35;UBERON:0005418!1.35e-08!5;UBERON:0002472!1.35e-08!5;UBERON:0008784!1.35e-08!5;UBERON:0006058!1.35e-08!5;UBERON:0004709!1.35e-08!5;UBERON:0005420!1.35e-08!5;UBERON:0006057!1.35e-08!5;UBERON:0000978!1.35e-08!5;UBERON:0002103!1.35e-08!5;UBERON:0000376!1.35e-08!5;UBERON:0000154!1.35e-08!5;UBERON:0005730!1.35e-08!5;UBERON:0003929!2.52e-08!55;UBERON:0002368!5.17e-08!60;UBERON:0003081!1.55e-07!88;UBERON:0000981!2.60e-07!4;UBERON:0002495!2.60e-07!4;UBERON:0003608!2.60e-07!4;UBERON:0003826!2.60e-07!4;UBERON:0008202!2.60e-07!4;UBERON:0004375!2.60e-07!4;UBERON:0002428!2.60e-07!4;UBERON:0003464!2.60e-07!4;UBERON:0003606!2.60e-07!4;UBERON:0009749!2.60e-07!4;UBERON:0003860!2.60e-07!4;UBERON:0005856!2.60e-07!4;UBERON:0005866!2.60e-07!4;UBERON:0007828!2.60e-07!4;UBERON:0005254!2.60e-07!4;UBERON:0001271!2.60e-07!4;UBERON:0002091!2.60e-07!4;UBERON:0001464!2.60e-07!4;UBERON:0003285!2.60e-07!4;UBERON:0010129!2.60e-07!4;UBERON:0006234!2.60e-07!4;UBERON:0001041!2.97e-07!92;UBERON:0000949!3.89e-07!72;UBERON:0002529!4.80e-07!6;UBERON:0002530!6.21e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.13e-14,23;UBERON:0000974,9.13e-14,23;UBERON:0004807,9.13e-14,23;UBERON:0005058,9.13e-14,23;UBERON:0003351,9.13e-14,23;UBERON:0009113,9.13e-14,23;UBERON:0003295,9.13e-14,23;UBERON:0009722,9.13e-14,23;UBERON:0005562,9.13e-14,23;UBERON:0007690,9.13e-14,23;UBERON:0006562,3.44e-13,24;UBERON:0003408,3.44e-13,24;UBERON:0001557,3.44e-13,24;UBERON:0001042,3.44e-13,24;UBERON:0008814,3.44e-13,24;UBERON:0009145,3.44e-13,24;UBERON:0000072,1.03e-11,27;UBERON:0004177,6.73e-11,29;UBERON:0005057,6.73e-11,29;UBERON:0000981,6.26e-10,4;UBERON:0003608,6.26e-10,4;UBERON:0003826,6.26e-10,4;UBERON:0008202,6.26e-10,4;UBERON:0004381,6.26e-10,4;UBERON:0007273,6.26e-10,4;UBERON:0010912,6.26e-10,4;UBERON:0002513,6.26e-10,4;UBERON:0004375,6.26e-10,4;UBERON:0010740,6.26e-10,4;UBERON:0010363,6.26e-10,4;UBERON:0003860,6.26e-10,4;UBERON:0002428,6.26e-10,4;UBERON:0010742,6.26e-10,4;UBERON:0002495,6.26e-10,4;UBERON:0003464,6.26e-10,4;UBERON:0003606,6.26e-10,4;UBERON:0005893,6.26e-10,4;UBERON:0009749,6.26e-10,4;UBERON:0010712,6.26e-10,4;UBERON:0010886,6.26e-10,4;UBERON:0005254,6.26e-10,4;UBERON:0010885,6.26e-10,4;UBERON:0010881,6.26e-10,4;UBERON:0010882,6.26e-10,4;UBERON:0007844,6.26e-10,4;UBERON:0001441,6.26e-10,4;UBERON:0011249,6.26e-10,4;UBERON:0002091,6.26e-10,4;UBERON:0003285,6.26e-10,4;UBERON:0004288,6.26e-10,4;UBERON:0010129,6.26e-10,4;UBERON:0006234,6.26e-10,4;UBERON:0000077,5.25e-09,35;UBERON:0007811,9.44e-09,36;UBERON:0005418,4.02e-08,5;UBERON:0002472,4.02e-08,5;UBERON:0008784,4.02e-08,5;UBERON:0006058,4.02e-08,5;UBERON:0004709,4.02e-08,5;UBERON:0002529,4.02e-08,5;UBERON:0010538,4.02e-08,5;UBERON:0005420,4.02e-08,5;UBERON:0010758,4.02e-08,5;UBERON:0000978,4.02e-08,5;UBERON:0002103,4.02e-08,5;UBERON:0000376,4.02e-08,5;UBERON:0000154,4.02e-08,5;UBERON:0010709,4.02e-08,5;UBERON:0005730,4.02e-08,5;UBERON:0003081,9.72e-08,87;UBERON:0000065,1.16e-07,41;UBERON:0001004,1.78e-07,42;UBERON:0000153,2.69e-07,43;UBERON:0002390,5.80e-07,45;UBERON:0003061,5.80e-07,45;UBERON:0000075,6.54e-07,6;UBERON:0005856,6.54e-07,6;UBERON:0005866,6.54e-07,6;UBERON:0005863,6.54e-07,6|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,5.490760163915,5.85161315804984,0,0.239316476986009,0,0.0874204024189974,0,0,0,0.157731082679119,0,0.42438965179803,0,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.14044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| ||
|EntrezGene=76630 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt= | |||
|association_with_transcript=-165bp_to_ENSMUST00000125232_5end | |||
|description=CAGE_peak_13_at_Stambpl1_5end | |||
|id=chr19:34291747..34291758,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,4.99e-07,6;CL:0002489,4.99e-07,6;CL:0000898,4.99e-07,6;CL:0000809,4.99e-07,6;CL:0000810,4.99e-07,6;CL:0000895,4.99e-07,6;CL:0000808,4.99e-07,6;CL:0000894,4.99e-07,6;CL:0000806,4.99e-07,6;CL:0000807,4.99e-07,6;CL:0000805,4.99e-07,6;CL:0002425,4.99e-07,6;CL:0002436,4.99e-07,6;CL:0002427,4.99e-07,6;CL:0002428,4.99e-07,6;CL:0002429,4.99e-07,6;CL:0002433,4.99e-07,6;CL:0002431,4.99e-07,6;CL:0002432,4.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.42e-19!29;UBERON:0005057!1.43e-15!51;UBERON:0002370!2.43e-14!23;UBERON:0000974!2.43e-14!23;UBERON:0004807!2.43e-14!23;UBERON:0005058!2.43e-14!23;UBERON:0003351!2.43e-14!23;UBERON:0009113!2.43e-14!23;UBERON:0003295!2.43e-14!23;UBERON:0009722!2.43e-14!23;UBERON:0005562!2.43e-14!23;UBERON:0007690!2.43e-14!23;UBERON:0006562!1.51e-13!24;UBERON:0003408!1.51e-13!24;UBERON:0001557!1.51e-13!24;UBERON:0001042!1.51e-13!24;UBERON:0008814!1.51e-13!24;UBERON:0009145!1.51e-13!24;UBERON:0002390!1.93e-12!45;UBERON:0003061!1.93e-12!45;UBERON:0000072!1.59e-11!27;UBERON:0002193!2.96e-11!48;UBERON:0002405!3.82e-11!70;UBERON:0000063!5.64e-09!35;UBERON:0005418!1.35e-08!5;UBERON:0002472!1.35e-08!5;UBERON:0008784!1.35e-08!5;UBERON:0006058!1.35e-08!5;UBERON:0004709!1.35e-08!5;UBERON:0005420!1.35e-08!5;UBERON:0006057!1.35e-08!5;UBERON:0000978!1.35e-08!5;UBERON:0002103!1.35e-08!5;UBERON:0000376!1.35e-08!5;UBERON:0000154!1.35e-08!5;UBERON:0005730!1.35e-08!5;UBERON:0003929!2.52e-08!55;UBERON:0002368!5.17e-08!60;UBERON:0003081!1.55e-07!88;UBERON:0000981!2.60e-07!4;UBERON:0002495!2.60e-07!4;UBERON:0003608!2.60e-07!4;UBERON:0003826!2.60e-07!4;UBERON:0008202!2.60e-07!4;UBERON:0004375!2.60e-07!4;UBERON:0002428!2.60e-07!4;UBERON:0003464!2.60e-07!4;UBERON:0003606!2.60e-07!4;UBERON:0009749!2.60e-07!4;UBERON:0003860!2.60e-07!4;UBERON:0005856!2.60e-07!4;UBERON:0005866!2.60e-07!4;UBERON:0007828!2.60e-07!4;UBERON:0005254!2.60e-07!4;UBERON:0001271!2.60e-07!4;UBERON:0002091!2.60e-07!4;UBERON:0001464!2.60e-07!4;UBERON:0003285!2.60e-07!4;UBERON:0010129!2.60e-07!4;UBERON:0006234!2.60e-07!4;UBERON:0001041!2.97e-07!92;UBERON:0000949!3.89e-07!72;UBERON:0002529!4.80e-07!6;UBERON:0002530!6.21e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.13e-14,23;UBERON:0000974,9.13e-14,23;UBERON:0004807,9.13e-14,23;UBERON:0005058,9.13e-14,23;UBERON:0003351,9.13e-14,23;UBERON:0009113,9.13e-14,23;UBERON:0003295,9.13e-14,23;UBERON:0009722,9.13e-14,23;UBERON:0005562,9.13e-14,23;UBERON:0007690,9.13e-14,23;UBERON:0006562,3.44e-13,24;UBERON:0003408,3.44e-13,24;UBERON:0001557,3.44e-13,24;UBERON:0001042,3.44e-13,24;UBERON:0008814,3.44e-13,24;UBERON:0009145,3.44e-13,24;UBERON:0000072,1.03e-11,27;UBERON:0004177,6.73e-11,29;UBERON:0005057,6.73e-11,29;UBERON:0000981,6.26e-10,4;UBERON:0003608,6.26e-10,4;UBERON:0003826,6.26e-10,4;UBERON:0008202,6.26e-10,4;UBERON:0004381,6.26e-10,4;UBERON:0007273,6.26e-10,4;UBERON:0010912,6.26e-10,4;UBERON:0002513,6.26e-10,4;UBERON:0004375,6.26e-10,4;UBERON:0010740,6.26e-10,4;UBERON:0010363,6.26e-10,4;UBERON:0003860,6.26e-10,4;UBERON:0002428,6.26e-10,4;UBERON:0010742,6.26e-10,4;UBERON:0002495,6.26e-10,4;UBERON:0003464,6.26e-10,4;UBERON:0003606,6.26e-10,4;UBERON:0005893,6.26e-10,4;UBERON:0009749,6.26e-10,4;UBERON:0010712,6.26e-10,4;UBERON:0010886,6.26e-10,4;UBERON:0005254,6.26e-10,4;UBERON:0010885,6.26e-10,4;UBERON:0010881,6.26e-10,4;UBERON:0010882,6.26e-10,4;UBERON:0007844,6.26e-10,4;UBERON:0001441,6.26e-10,4;UBERON:0011249,6.26e-10,4;UBERON:0002091,6.26e-10,4;UBERON:0003285,6.26e-10,4;UBERON:0004288,6.26e-10,4;UBERON:0010129,6.26e-10,4;UBERON:0006234,6.26e-10,4;UBERON:0000077,5.25e-09,35;UBERON:0007811,9.44e-09,36;UBERON:0005418,4.02e-08,5;UBERON:0002472,4.02e-08,5;UBERON:0008784,4.02e-08,5;UBERON:0006058,4.02e-08,5;UBERON:0004709,4.02e-08,5;UBERON:0002529,4.02e-08,5;UBERON:0010538,4.02e-08,5;UBERON:0005420,4.02e-08,5;UBERON:0010758,4.02e-08,5;UBERON:0000978,4.02e-08,5;UBERON:0002103,4.02e-08,5;UBERON:0000376,4.02e-08,5;UBERON:0000154,4.02e-08,5;UBERON:0010709,4.02e-08,5;UBERON:0005730,4.02e-08,5;UBERON:0003081,9.72e-08,87;UBERON:0000065,1.16e-07,41;UBERON:0001004,1.78e-07,42;UBERON:0000153,2.69e-07,43;UBERON:0002390,5.80e-07,45;UBERON:0003061,5.80e-07,45;UBERON:0000075,6.54e-07,6;UBERON:0005856,6.54e-07,6;UBERON:0005866,6.54e-07,6;UBERON:0005863,6.54e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,5.490760163915,5.85161315804984,0,0.239316476986009,0,0.0874204024189974,0,0,0,0.157731082679119,0,0.42438965179803,0,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0.323533699894818,2.20841518460394,4.363877278217,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0.50925170356284,0.575392274901621,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.925972636848558,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.129920822977795,0.537080087002444,0.39736270956253,0.360586348559907,1.77227432609493,0.706765149637033,0.990688486514998,0.604957110821043,1.26695244961678,0.481059208201647,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p13@Stambpl1 | |||
}} |
Revision as of 17:25, 13 September 2013
Short description: | p13@Stambpl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Stambpl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | -165bp_to_ENSMUST00000125232_5end |
EntrezGene: | Stambpl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 4.99e-07 | 6 |
double negative thymocyte | 4.99e-07 | 6 |
naive T cell | 4.99e-07 | 6 |
double-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 4.99e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.99e-07 | 6 |
DN4 thymocyte | 4.99e-07 | 6 |
DN1 thymic pro-T cell | 4.99e-07 | 6 |
DN2 thymocyte | 4.99e-07 | 6 |
DN3 thymocyte | 4.99e-07 | 6 |
immature single positive thymocyte | 4.99e-07 | 6 |
early T lineage precursor | 4.99e-07 | 6 |
mature CD4 single-positive thymocyte | 4.99e-07 | 6 |
resting double-positive thymocyte | 4.99e-07 | 6 |
double-positive blast | 4.99e-07 | 6 |
CD69-positive double-positive thymocyte | 4.99e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 4.99e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.99e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 4.99e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.