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FFCP PHASE1:Mm9::chr15:79725416..79725445,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=80287|HGNC=|MCL_coexpression_id=1898|UniProt=Q3TI69,B5T0I8|association_with_transcript=-7bp_to_ENSMUST00000023054,uc007wuu.2_5end|description=CAGE_peak_3_at_Apobec3_5end|id=chr15:79725416..79725445,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-12,32;CL:0002032,1.63e-12,32;CL:0000037,1.63e-12,32;CL:0000837,1.63e-12,32;CL:0000553,6.06e-11,6;CL:0000556,6.06e-11,6;CL:0000049,1.98e-10,19;CL:0002031,2.87e-07,25;CL:0000763,3.23e-07,16;CL:0002320,3.40e-07,46;CL:0000134,3.40e-07,46;CL:0000050,6.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.51e-11!45;UBERON:0003061!3.51e-11!45;UBERON:0002193!8.73e-11!48;UBERON:0004177!1.29e-09!29;UBERON:0002405!1.58e-09!70;UBERON:0005057!1.25e-07!51;UBERON:0003104!2.35e-07!131;UBERON:0009142!2.35e-07!131;UBERON:0000077!4.71e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.77e-23,48;UBERON:0002405,4.77e-23,48;UBERON:0002390,5.28e-23,45;UBERON:0003061,5.28e-23,45;UBERON:0004177,1.46e-16,29;UBERON:0005057,1.46e-16,29;UBERON:0003081,2.60e-13,87;UBERON:0000077,9.52e-13,35;UBERON:0003408,8.28e-12,24;UBERON:0002370,5.99e-11,23;UBERON:0000974,5.99e-11,23;UBERON:0004807,5.99e-11,23;UBERON:0005058,5.99e-11,23;UBERON:0003351,5.99e-11,23;UBERON:0009113,5.99e-11,23;UBERON:0003295,5.99e-11,23;UBERON:0009722,5.99e-11,23;UBERON:0005562,5.99e-11,23;UBERON:0007690,5.99e-11,23;UBERON:0006562,2.48e-10,24;UBERON:0001557,2.48e-10,24;UBERON:0001042,2.48e-10,24;UBERON:0008814,2.48e-10,24;UBERON:0009145,2.48e-10,24;UBERON:0000926,5.87e-10,120;UBERON:0004120,5.87e-10,120;UBERON:0006603,5.87e-10,120;UBERON:0000072,9.13e-09,27;UBERON:0001474,1.22e-08,22;UBERON:0004765,1.22e-08,22;UBERON:0001434,1.22e-08,22;UBERON:0001041,1.23e-08,80;UBERON:0002204,3.40e-08,32;UBERON:0002106,1.70e-07,6;UBERON:0004457,1.70e-07,6;UBERON:0000042,1.70e-07,6;UBERON:0004854,1.70e-07,6;UBERON:0009034,1.70e-07,6;UBERON:0002095,1.70e-07,6;UBERON:0004782,1.70e-07,6;UBERON:0003281,1.70e-07,6;UBERON:0009664,1.70e-07,6;UBERON:0002296,1.70e-07,6;UBERON:0005602,1.70e-07,6;UBERON:0001179,1.70e-07,6;UBERON:0006293,1.70e-07,6;UBERON:0003887,2.84e-07,10;UBERON:0002371,3.23e-07,16;UBERON:0002384,3.40e-07,46;UBERON:0000490,3.96e-07,66;UBERON:0003929,7.02e-07,55|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.703943610758334,0,0.171217968225505,0,4.62241970814255,0,6.32908547449759,11.3386149738303,6.99561878128147,15.4576461025536,16.8650753335059,14.004858509335,0,4.76596565764249,8.35839325244593,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,2.51118978442145,4.6880120671428,4.18818995179039,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.69791296961662,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,27.9652914338945,0.445326417194474,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,1.3013942122792,6.19227386364912,0,3.09178125844551,4.84875253135222,0,0,0,0.510914110417183,7.18890747035522,2.99951365496704,4.57452817463033,0,0,0,0,0,0,0,0,3.23458123586242,1.0108910337347,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,4.91549231119264,2.05878325691772,3.9782889915383,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0.330418782983798,0,0.639864751605702,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0.627994911365499,0,0,1.50160595144485,1.37591296579242,2.02375901146368,1.42002084971952,2.65294875727659,3.56476192493988,1.15078454980324,0.972811360650212,0.823684239564244,0,0,0,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,1.38147985492716,0.433947175744535,0,0,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,1.15479086080775,1.32745138339963,0,0,0,0,0,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,9.7396402054776,0.619160603889667,4.62986318424279,7.91147519419702,14.7629765938707,11.2101304871196,2.03974115992626,3.07893195112048,1.65839968565309,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0.234714477291508,0,0,0,0,3.47612232690996,3.04087822935246,3.49217254360413,3.24802057444488,3.04345382634718,2.78153896693771,2.88469078847925,2.36303243479324,3.53382574818517,3.73413352609499,3.12561173924206,2.53390489923356,3.07877893249054,3.27255326108393,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0.377252682772152,0.561849044819294,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,1.16965804222704,0,0,0.220591419119515,0.463735671240843|short_description=p3@Apobec3}}
|EntrezGene=80287
|HGNC=
|MCL_coexpression_id=1898
|UniProt=Q3TI69,B5T0I8
|association_with_transcript=-7bp_to_ENSMUST00000023054,uc007wuu.2_5end
|description=CAGE_peak_3_at_Apobec3_5end
|id=chr15:79725416..79725445,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,1.63e-12,32;CL:0002032,1.63e-12,32;CL:0000037,1.63e-12,32;CL:0000837,1.63e-12,32;CL:0000553,6.06e-11,6;CL:0000556,6.06e-11,6;CL:0000049,1.98e-10,19;CL:0002031,2.87e-07,25;CL:0000763,3.23e-07,16;CL:0002320,3.40e-07,46;CL:0000134,3.40e-07,46;CL:0000050,6.65e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!3.51e-11!45;UBERON:0003061!3.51e-11!45;UBERON:0002193!8.73e-11!48;UBERON:0004177!1.29e-09!29;UBERON:0002405!1.58e-09!70;UBERON:0005057!1.25e-07!51;UBERON:0003104!2.35e-07!131;UBERON:0009142!2.35e-07!131;UBERON:0000077!4.71e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.77e-23,48;UBERON:0002405,4.77e-23,48;UBERON:0002390,5.28e-23,45;UBERON:0003061,5.28e-23,45;UBERON:0004177,1.46e-16,29;UBERON:0005057,1.46e-16,29;UBERON:0003081,2.60e-13,87;UBERON:0000077,9.52e-13,35;UBERON:0003408,8.28e-12,24;UBERON:0002370,5.99e-11,23;UBERON:0000974,5.99e-11,23;UBERON:0004807,5.99e-11,23;UBERON:0005058,5.99e-11,23;UBERON:0003351,5.99e-11,23;UBERON:0009113,5.99e-11,23;UBERON:0003295,5.99e-11,23;UBERON:0009722,5.99e-11,23;UBERON:0005562,5.99e-11,23;UBERON:0007690,5.99e-11,23;UBERON:0006562,2.48e-10,24;UBERON:0001557,2.48e-10,24;UBERON:0001042,2.48e-10,24;UBERON:0008814,2.48e-10,24;UBERON:0009145,2.48e-10,24;UBERON:0000926,5.87e-10,120;UBERON:0004120,5.87e-10,120;UBERON:0006603,5.87e-10,120;UBERON:0000072,9.13e-09,27;UBERON:0001474,1.22e-08,22;UBERON:0004765,1.22e-08,22;UBERON:0001434,1.22e-08,22;UBERON:0001041,1.23e-08,80;UBERON:0002204,3.40e-08,32;UBERON:0002106,1.70e-07,6;UBERON:0004457,1.70e-07,6;UBERON:0000042,1.70e-07,6;UBERON:0004854,1.70e-07,6;UBERON:0009034,1.70e-07,6;UBERON:0002095,1.70e-07,6;UBERON:0004782,1.70e-07,6;UBERON:0003281,1.70e-07,6;UBERON:0009664,1.70e-07,6;UBERON:0002296,1.70e-07,6;UBERON:0005602,1.70e-07,6;UBERON:0001179,1.70e-07,6;UBERON:0006293,1.70e-07,6;UBERON:0003887,2.84e-07,10;UBERON:0002371,3.23e-07,16;UBERON:0002384,3.40e-07,46;UBERON:0000490,3.96e-07,66;UBERON:0003929,7.02e-07,55
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.703943610758334,0,0.171217968225505,0,4.62241970814255,0,6.32908547449759,11.3386149738303,6.99561878128147,15.4576461025536,16.8650753335059,14.004858509335,0,4.76596565764249,8.35839325244593,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,2.51118978442145,4.6880120671428,4.18818995179039,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,4.69791296961662,2.90144856804538,3.02484419228218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0,27.9652914338945,0.445326417194474,0.346970653532272,0.608930956624282,0,0.150722640552623,0.117588707135705,0,0,1.3013942122792,6.19227386364912,0,3.09178125844551,4.84875253135222,0,0,0,0.510914110417183,7.18890747035522,2.99951365496704,4.57452817463033,0,0,0,0,0,0,0,0,3.23458123586242,1.0108910337347,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,4.91549231119264,2.05878325691772,3.9782889915383,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0.219550115291051,0,0,0,0.330418782983798,0,0.639864751605702,0,0,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0.627994911365499,0,0,1.50160595144485,1.37591296579242,2.02375901146368,1.42002084971952,2.65294875727659,3.56476192493988,1.15078454980324,0.972811360650212,0.823684239564244,0,0,0,0.252578877947112,0,0,1.47802552133284,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.491589944147214,1.38147985492716,0.433947175744535,0,0,0.983528546038072,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,1.15479086080775,1.32745138339963,0,0,0,0,0,0.516856586336442,0.727067458955011,0,0.948110273807448,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0.582961673259701,0.18542530201051,9.7396402054776,0.619160603889667,4.62986318424279,7.91147519419702,14.7629765938707,11.2101304871196,2.03974115992626,3.07893195112048,1.65839968565309,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0.234714477291508,0,0,0,0,3.47612232690996,3.04087822935246,3.49217254360413,3.24802057444488,3.04345382634718,2.78153896693771,2.88469078847925,2.36303243479324,3.53382574818517,3.73413352609499,3.12561173924206,2.53390489923356,3.07877893249054,3.27255326108393,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,0.73260649706906,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0.377252682772152,0.561849044819294,0.0640251524048693,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,1.16965804222704,0,0,0.220591419119515,0.463735671240843
|short_description=p3@Apobec3
}}

Revision as of 11:12, 13 September 2013

Short description:p3@Apobec3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Apobec3_5end
Coexpression cluster:MCL_coexpression_mm9:1898
Association with transcript: -7bp_to_ENSMUST00000023054, uc007wuu.2_5end
EntrezGene:Apobec3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Apobec3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H927.97
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G29.74
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D17.91
spleen, neonate N20.CNhs11112.824-19H114.76
spleen, neonate N25.CNhs11099.1354-25G311.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.49
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E43.13
thymus, neonate N20.CNhs11186.820-7A22.53
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system4.77e-2348
immune system4.77e-2348
hematopoietic system5.28e-2345
blood island5.28e-2345
hemopoietic organ1.46e-1629
immune organ1.46e-1629
lateral plate mesoderm2.60e-1387
mixed endoderm/mesoderm-derived structure9.52e-1335
gland of gut8.28e-1224
thymus5.99e-1123
neck5.99e-1123
respiratory system epithelium5.99e-1123
hemolymphoid system gland5.99e-1123
pharyngeal epithelium5.99e-1123
thymic region5.99e-1123
pharyngeal gland5.99e-1123
entire pharyngeal arch endoderm5.99e-1123
thymus primordium5.99e-1123
early pharyngeal endoderm5.99e-1123
pharynx2.48e-1024
upper respiratory tract2.48e-1024
chordate pharynx2.48e-1024
pharyngeal arch system2.48e-1024
pharyngeal region of foregut2.48e-1024
mesoderm5.87e-10120
mesoderm-derived structure5.87e-10120
presumptive mesoderm5.87e-10120
segment of respiratory tract9.13e-0927
bone element1.22e-0822
skeletal element1.22e-0822
skeletal system1.22e-0822
foregut1.23e-0880
musculoskeletal system3.40e-0832
spleen1.70e-076
cavity lining1.70e-076
serous membrane1.70e-076
gastrointestinal system mesentery1.70e-076
stomach region1.70e-076
mesentery1.70e-076
gastrointestinal system serosa1.70e-076
mesentery of stomach1.70e-076
gut mesentery1.70e-076
dorsal mesentery1.70e-076
dorsal mesogastrium1.70e-076
peritoneal cavity1.70e-076
spleen primordium1.70e-076
intraembryonic coelom2.84e-0710
bone marrow3.23e-0716
connective tissue3.40e-0746
unilaminar epithelium3.96e-0766
gut epithelium7.02e-0755







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