FFCP PHASE1:Mm9::chr2:79094846..79094877,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=712|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:79094846..79094877,-|id=chr2:79094846..79094877,-|ontology_enrichment_celltype=CL:0000988!3.43e-13!32;CL:0002032!3.43e-13!32;CL:0000037!3.43e-13!32;CL:0000566!3.43e-13!32;CL:0000837!3.43e-13!32;CL:0000838!3.26e-11!12;CL:0000084!2.37e-10!11;CL:0000827!2.37e-10!11;CL:0000542!4.99e-10!13;CL:0000051!4.99e-10!13;CL:0002031!7.91e-10!25;CL:0000791!2.51e-08!9;CL:0000789!2.51e-08!9;CL:0002420!2.51e-08!9;CL:0002419!2.51e-08!9;CL:0000790!2.51e-08!9;CL:0000624!1.39e-07!8;CL:0000738!9.65e-07!17;CL:0002087!9.65e-07!17;CL:0002320!9.79e-07!46;CL:0000134!9.79e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,9.94e-18,32;CL:0002032,9.94e-18,32;CL:0000037,9.94e-18,32;CL:0000837,9.94e-18,32;CL:0000838,1.30e-16,12;CL:0000542,3.62e-15,13;CL:0000051,3.62e-15,13;CL:0000084,7.45e-15,11;CL:0000827,7.45e-15,11;CL:0002031,1.96e-14,25;CL:0000738,4.25e-11,17;CL:0002087,4.25e-11,17;CL:0002320,5.38e-11,46;CL:0000134,5.38e-11,46;CL:0000791,7.22e-11,9;CL:0000789,7.22e-11,9;CL:0002420,7.22e-11,9;CL:0002419,7.22e-11,9;CL:0000790,7.22e-11,9;CL:0000624,2.27e-09,8;CL:0000219,9.71e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.40e-07,3;DOID:4045,3.40e-07,3|ontology_enrichment_uberon=UBERON:0002193!2.17e-22!48;UBERON:0002390!4.44e-20!45;UBERON:0003061!4.44e-20!45;UBERON:0002405!2.39e-19!70;UBERON:0004177!1.76e-18!29;UBERON:0003408!3.57e-15!24;UBERON:0002370!1.33e-14!23;UBERON:0000974!1.33e-14!23;UBERON:0004807!1.33e-14!23;UBERON:0005058!1.33e-14!23;UBERON:0003351!1.33e-14!23;UBERON:0009113!1.33e-14!23;UBERON:0003295!1.33e-14!23;UBERON:0009722!1.33e-14!23;UBERON:0005562!1.33e-14!23;UBERON:0007690!1.33e-14!23;UBERON:0005057!3.23e-14!51;UBERON:0006562!1.12e-13!24;UBERON:0001557!1.12e-13!24;UBERON:0001042!1.12e-13!24;UBERON:0008814!1.12e-13!24;UBERON:0009145!1.12e-13!24;UBERON:0001004!3.36e-12!42;UBERON:0000065!1.14e-11!41;UBERON:0000072!2.44e-11!27;UBERON:0003081!1.52e-08!88;UBERON:0005911!1.57e-08!69;UBERON:0001041!1.58e-08!92;UBERON:0000063!7.52e-08!35;UBERON:0000077!1.96e-07!97;UBERON:0003929!3.38e-07!55;UBERON:0002384!9.79e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.70e-27,48;UBERON:0002405,6.70e-27,48;UBERON:0002390,1.65e-26,45;UBERON:0003061,1.65e-26,45;UBERON:0002370,2.33e-23,23;UBERON:0000974,2.33e-23,23;UBERON:0004807,2.33e-23,23;UBERON:0005058,2.33e-23,23;UBERON:0003351,2.33e-23,23;UBERON:0009113,2.33e-23,23;UBERON:0003295,2.33e-23,23;UBERON:0009722,2.33e-23,23;UBERON:0005562,2.33e-23,23;UBERON:0007690,2.33e-23,23;UBERON:0004177,1.71e-22,29;UBERON:0005057,1.71e-22,29;UBERON:0006562,3.30e-22,24;UBERON:0003408,3.30e-22,24;UBERON:0001557,3.30e-22,24;UBERON:0001042,3.30e-22,24;UBERON:0008814,3.30e-22,24;UBERON:0009145,3.30e-22,24;UBERON:0000072,2.88e-19,27;UBERON:0000077,8.08e-18,35;UBERON:0007811,2.10e-13,36;UBERON:0003081,1.11e-11,87;UBERON:0000065,2.85e-11,41;UBERON:0002384,5.38e-11,46;UBERON:0001004,6.60e-11,42;UBERON:0000153,1.47e-10,43;UBERON:0000490,2.35e-09,66;UBERON:0000926,2.92e-09,120;UBERON:0004120,2.92e-09,120;UBERON:0006603,2.92e-09,120;UBERON:0003929,2.24e-08,55;UBERON:0002368,2.44e-07,60|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,9.15126693985834,7.0219357896598,0.68487187290202,0.159544317990673,1.36960583944965,1.31130603628496,0.666219523631325,1.41732687172878,0.699561878128147,3.94327706697797,3.42786084014347,5.51706547337439,0.255129870453209,3.47518329203099,5.22399578277871,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,4.6880120671428,1.57057123192139,2.35292595212406,2.04913645487534,4.85510353031154,0,0,0,0,0,0,0,0,0,1.67782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21450920753212,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,1.32504911076236,0.484875253135222,0,0,0,0,1.1981512450592,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,1.01430060694251,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.565105371014073,1.50363650493128,2.28778173206523,0.849892149969277,1.53946597556024,0.967399816630967,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,2.63542779877213,3.08132871494482,2.33857481360031,3.40150721768215,1.58945083825012,1.20195449519969,1.47689527174577,1.71642964911851,1.5241361331,1.10908803650525,0.877120926657772,1.92423683280659,4.79195298944433,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.695603506861264|short_description=p@chr2:79094846..79094877,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=712 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:79094846..79094877,- | |||
|id=chr2:79094846..79094877,- | |||
|ontology_enrichment_celltype=CL:0000988!3.43e-13!32;CL:0002032!3.43e-13!32;CL:0000037!3.43e-13!32;CL:0000566!3.43e-13!32;CL:0000837!3.43e-13!32;CL:0000838!3.26e-11!12;CL:0000084!2.37e-10!11;CL:0000827!2.37e-10!11;CL:0000542!4.99e-10!13;CL:0000051!4.99e-10!13;CL:0002031!7.91e-10!25;CL:0000791!2.51e-08!9;CL:0000789!2.51e-08!9;CL:0002420!2.51e-08!9;CL:0002419!2.51e-08!9;CL:0000790!2.51e-08!9;CL:0000624!1.39e-07!8;CL:0000738!9.65e-07!17;CL:0002087!9.65e-07!17;CL:0002320!9.79e-07!46;CL:0000134!9.79e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.94e-18,32;CL:0002032,9.94e-18,32;CL:0000037,9.94e-18,32;CL:0000837,9.94e-18,32;CL:0000838,1.30e-16,12;CL:0000542,3.62e-15,13;CL:0000051,3.62e-15,13;CL:0000084,7.45e-15,11;CL:0000827,7.45e-15,11;CL:0002031,1.96e-14,25;CL:0000738,4.25e-11,17;CL:0002087,4.25e-11,17;CL:0002320,5.38e-11,46;CL:0000134,5.38e-11,46;CL:0000791,7.22e-11,9;CL:0000789,7.22e-11,9;CL:0002420,7.22e-11,9;CL:0002419,7.22e-11,9;CL:0000790,7.22e-11,9;CL:0000624,2.27e-09,8;CL:0000219,9.71e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.40e-07,3;DOID:4045,3.40e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.17e-22!48;UBERON:0002390!4.44e-20!45;UBERON:0003061!4.44e-20!45;UBERON:0002405!2.39e-19!70;UBERON:0004177!1.76e-18!29;UBERON:0003408!3.57e-15!24;UBERON:0002370!1.33e-14!23;UBERON:0000974!1.33e-14!23;UBERON:0004807!1.33e-14!23;UBERON:0005058!1.33e-14!23;UBERON:0003351!1.33e-14!23;UBERON:0009113!1.33e-14!23;UBERON:0003295!1.33e-14!23;UBERON:0009722!1.33e-14!23;UBERON:0005562!1.33e-14!23;UBERON:0007690!1.33e-14!23;UBERON:0005057!3.23e-14!51;UBERON:0006562!1.12e-13!24;UBERON:0001557!1.12e-13!24;UBERON:0001042!1.12e-13!24;UBERON:0008814!1.12e-13!24;UBERON:0009145!1.12e-13!24;UBERON:0001004!3.36e-12!42;UBERON:0000065!1.14e-11!41;UBERON:0000072!2.44e-11!27;UBERON:0003081!1.52e-08!88;UBERON:0005911!1.57e-08!69;UBERON:0001041!1.58e-08!92;UBERON:0000063!7.52e-08!35;UBERON:0000077!1.96e-07!97;UBERON:0003929!3.38e-07!55;UBERON:0002384!9.79e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.70e-27,48;UBERON:0002405,6.70e-27,48;UBERON:0002390,1.65e-26,45;UBERON:0003061,1.65e-26,45;UBERON:0002370,2.33e-23,23;UBERON:0000974,2.33e-23,23;UBERON:0004807,2.33e-23,23;UBERON:0005058,2.33e-23,23;UBERON:0003351,2.33e-23,23;UBERON:0009113,2.33e-23,23;UBERON:0003295,2.33e-23,23;UBERON:0009722,2.33e-23,23;UBERON:0005562,2.33e-23,23;UBERON:0007690,2.33e-23,23;UBERON:0004177,1.71e-22,29;UBERON:0005057,1.71e-22,29;UBERON:0006562,3.30e-22,24;UBERON:0003408,3.30e-22,24;UBERON:0001557,3.30e-22,24;UBERON:0001042,3.30e-22,24;UBERON:0008814,3.30e-22,24;UBERON:0009145,3.30e-22,24;UBERON:0000072,2.88e-19,27;UBERON:0000077,8.08e-18,35;UBERON:0007811,2.10e-13,36;UBERON:0003081,1.11e-11,87;UBERON:0000065,2.85e-11,41;UBERON:0002384,5.38e-11,46;UBERON:0001004,6.60e-11,42;UBERON:0000153,1.47e-10,43;UBERON:0000490,2.35e-09,66;UBERON:0000926,2.92e-09,120;UBERON:0004120,2.92e-09,120;UBERON:0006603,2.92e-09,120;UBERON:0003929,2.24e-08,55;UBERON:0002368,2.44e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,9.15126693985834,7.0219357896598,0.68487187290202,0.159544317990673,1.36960583944965,1.31130603628496,0.666219523631325,1.41732687172878,0.699561878128147,3.94327706697797,3.42786084014347,5.51706547337439,0.255129870453209,3.47518329203099,5.22399578277871,0.47997726838022,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,4.6880120671428,1.57057123192139,2.35292595212406,2.04913645487534,4.85510353031154,0,0,0,0,0,0,0,0,0,1.67782606057736,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21450920753212,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,1.32504911076236,0.484875253135222,0,0,0,0,1.1981512450592,0.599902730993408,0.889491589511453,0,0,0,0,0,0,0,0,0.870848794270651,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,1.98914449576915,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,1.01430060694251,0.482354319504834,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,0,0,0.624075346229121,0,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.341741761595705,0.619160603889667,0.370389054739423,0.565105371014073,1.50363650493128,2.28778173206523,0.849892149969277,1.53946597556024,0.967399816630967,0,0,0,0.108005340821801,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,2.63542779877213,3.08132871494482,2.33857481360031,3.40150721768215,1.58945083825012,1.20195449519969,1.47689527174577,1.71642964911851,1.5241361331,1.10908803650525,0.877120926657772,1.92423683280659,4.79195298944433,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0.695603506861264 | |||
|short_description=p@chr2:79094846..79094877,- | |||
}} |
Revision as of 00:42, 14 September 2013
Short description: | p@chr2:79094846..79094877, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79094846..79094877, - |
Coexpression cluster: | MCL_coexpression_mm9:712 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.94e-18 | 32 |
hematopoietic oligopotent progenitor cell | 9.94e-18 | 32 |
hematopoietic stem cell | 9.94e-18 | 32 |
hematopoietic multipotent progenitor cell | 9.94e-18 | 32 |
lymphoid lineage restricted progenitor cell | 1.30e-16 | 12 |
lymphocyte | 3.62e-15 | 13 |
common lymphoid progenitor | 3.62e-15 | 13 |
T cell | 7.45e-15 | 11 |
pro-T cell | 7.45e-15 | 11 |
hematopoietic lineage restricted progenitor cell | 1.96e-14 | 25 |
leukocyte | 4.25e-11 | 17 |
nongranular leukocyte | 4.25e-11 | 17 |
connective tissue cell | 5.38e-11 | 46 |
mesenchymal cell | 5.38e-11 | 46 |
mature alpha-beta T cell | 7.22e-11 | 9 |
alpha-beta T cell | 7.22e-11 | 9 |
immature T cell | 7.22e-11 | 9 |
mature T cell | 7.22e-11 | 9 |
immature alpha-beta T cell | 7.22e-11 | 9 |
CD4-positive, alpha-beta T cell | 2.27e-09 | 8 |
motile cell | 9.71e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.40e-07 | 3 |
muscle cancer | 3.40e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.