FFCP PHASE1:Mm9::chr1:192752452..192752531,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52477|HGNC=|UniProt=Q8K1C0|association_with_transcript=68bp_to_NM_021421,NR_037578,NR_037579,uc007ebk.2,uc007ebl.2,uc007ebm.2,uc007ebn.2,uc007ebo.2_5end|description=CAGE_peak_1_at_Angel2_5end|id=chr1:192752452..192752531,+|ontology_enrichment_celltype=CL:0000117!3.75e-10!23;CL:0000337!3.75e-10!23;CL:0000540!6.75e-09!33;CL:0000047!6.75e-09!33;CL:0000031!6.75e-09!33;CL:0000404!6.75e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.75e-10,23;CL:0000337,3.75e-10,23;CL:0000540,6.75e-09,33;CL:0000047,6.75e-09,33;CL:0000031,6.75e-09,33;CL:0000404,6.75e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.52e-20!94;UBERON:0007811!1.85e-19!86;UBERON:0000064!4.02e-15!99;UBERON:0002020!7.08e-14!34;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0003056!9.28e-12!49;UBERON:0001049!1.09e-11!52;UBERON:0005068!1.09e-11!52;UBERON:0006241!1.09e-11!52;UBERON:0007135!1.09e-11!52;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0000033!2.40e-11!63;UBERON:0000073!4.17e-11!75;UBERON:0001016!4.17e-11!75;UBERON:0000955!4.84e-11!50;UBERON:0006238!4.84e-11!50;UBERON:0003080!6.74e-11!40;UBERON:0002780!1.09e-10!39;UBERON:0001890!1.09e-10!39;UBERON:0006240!1.09e-10!39;UBERON:0002616!1.64e-10!49;UBERON:0000956!2.92e-09!21;UBERON:0001869!2.92e-09!21;UBERON:0000203!2.92e-09!21;UBERON:0002346!8.21e-09!71;UBERON:0003075!8.21e-09!71;UBERON:0007284!8.21e-09!71;UBERON:0002370!2.31e-08!23;UBERON:0000974!2.31e-08!23;UBERON:0004807!2.31e-08!23;UBERON:0005058!2.31e-08!23;UBERON:0003351!2.31e-08!23;UBERON:0009113!2.31e-08!23;UBERON:0003295!2.31e-08!23;UBERON:0009722!2.31e-08!23;UBERON:0005562!2.31e-08!23;UBERON:0007690!2.31e-08!23;UBERON:0004121!4.08e-08!102;UBERON:0000924!4.08e-08!102;UBERON:0006601!4.08e-08!102;UBERON:0006562!4.14e-08!24;UBERON:0001557!4.14e-08!24;UBERON:0001042!4.14e-08!24;UBERON:0008814!4.14e-08!24;UBERON:0009145!4.14e-08!24;UBERON:0003408!2.51e-07!24;UBERON:0002619!6.77e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.08e-14,34;UBERON:0002346,1.99e-12,64;UBERON:0003075,1.99e-12,64;UBERON:0007284,1.99e-12,64;UBERON:0003528,3.30e-12,29;UBERON:0002791,3.30e-12,29;UBERON:0001893,3.30e-12,29;UBERON:0000073,3.55e-12,54;UBERON:0010371,4.84e-12,73;UBERON:0003056,9.28e-12,49;UBERON:0001049,1.09e-11,52;UBERON:0005068,1.09e-11,52;UBERON:0006241,1.09e-11,52;UBERON:0007135,1.09e-11,52;UBERON:0001017,1.16e-11,73;UBERON:0001016,4.17e-11,75;UBERON:0003080,6.74e-11,40;UBERON:0004121,7.67e-11,95;UBERON:0000924,7.67e-11,95;UBERON:0006601,7.67e-11,95;UBERON:0002780,1.09e-10,39;UBERON:0001890,1.09e-10,39;UBERON:0006240,1.09e-10,39;UBERON:0000955,2.00e-10,47;UBERON:0006238,2.00e-10,47;UBERON:0002616,6.69e-10,46;UBERON:0000956,2.92e-09,21;UBERON:0001869,2.92e-09,21;UBERON:0000203,2.92e-09,21;UBERON:0002370,2.31e-08,23;UBERON:0000974,2.31e-08,23;UBERON:0004807,2.31e-08,23;UBERON:0005058,2.31e-08,23;UBERON:0003351,2.31e-08,23;UBERON:0009113,2.31e-08,23;UBERON:0003295,2.31e-08,23;UBERON:0009722,2.31e-08,23;UBERON:0005562,2.31e-08,23;UBERON:0007690,2.31e-08,23;UBERON:0000153,4.12e-08,43;UBERON:0006562,4.14e-08,24;UBERON:0001557,4.14e-08,24;UBERON:0001042,4.14e-08,24;UBERON:0008814,4.14e-08,24;UBERON:0009145,4.14e-08,24;UBERON:0007811,4.78e-08,36;UBERON:0010314,1.55e-07,92;UBERON:0003408,2.51e-07,24;UBERON:0000483,2.51e-07,174;UBERON:0002619,6.77e-07,17;UBERON:0000119,9.38e-07,176|phase1_expression=10.2495262147068,8.37540978334467,13.6499771816861,16.3330674105688,16.5295590882295,6.71517087647559,9.57811826441655,15.4947988129892,17.8801677132617,17.0867104215055,10.1018601253048,11.1681022593471,15.9216678836021,14.0746847894586,8.66085380720723,11.1361397064404,4.19737126876888,19.4009231695316,16.1795031654772,16.1268067683251,6.37824676133023,5.36171136484781,6.26879493933445,7.35965144849671,8.71755268055246,11.4846392823004,7.75371593086335,8.40337807474967,8.7410772949932,10.3332353201572,6.20845429834853,3.81018404075779,4.92051830067656,0,8.37669697278696,6.4831511689812,5.9209113316087,10.8818223991596,7.813353445238,6.28228492768558,6.47054636834116,8.87959130445979,6.79714494243615,3.65100772129174,3.24406179902447,2.56965453026354,2.34717403304412,1.74420125104357,4.61340983742391,3.30530828426282,4.75953833526233,7.18762821824858,25.5029561207759,20.3101399763176,12.0993767691287,2.82985379639542,4.29800159908135,3.6097046459421,15.1737345644698,12.1667925232568,15.8457850876545,1.69422266034566,5.33576877666684,0.899899717281399,0.988866362566974,1.4209602298922,1.79760066311043,2.68952813725088,19.8047159509192,17.010748229793,18.0879466762189,10.8547374073445,12.589506834242,18.741092279888,19.6483215587385,18.3843757322004,8.8092704799511,11.2364857514965,10.1380311949121,14.2437190748609,18.9379422256988,13.5437476344758,13.959149950069,7.31591393041184,10.0846843532695,10.0173719061047,11.8168495063255,14.7255562201987,6.36100023998746,5.89458168832927,6.08715426273523,1.72084775396277,1.3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1537424671475|short_description=p1@Angel2}} | ||
|EntrezGene=52477 | |||
|HGNC= | |||
|UniProt=Q8K1C0 | |||
|association_with_transcript=68bp_to_NM_021421,NR_037578,NR_037579,uc007ebk.2,uc007ebl.2,uc007ebm.2,uc007ebn.2,uc007ebo.2_5end | |||
|description=CAGE_peak_1_at_Angel2_5end | |||
|id=chr1:192752452..192752531,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.75e-10!23;CL:0000337!3.75e-10!23;CL:0000540!6.75e-09!33;CL:0000047!6.75e-09!33;CL:0000031!6.75e-09!33;CL:0000404!6.75e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.75e-10,23;CL:0000337,3.75e-10,23;CL:0000540,6.75e-09,33;CL:0000047,6.75e-09,33;CL:0000031,6.75e-09,33;CL:0000404,6.75e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.52e-20!94;UBERON:0007811!1.85e-19!86;UBERON:0000064!4.02e-15!99;UBERON:0002020!7.08e-14!34;UBERON:0002791!3.30e-12!29;UBERON:0003528!3.30e-12!29;UBERON:0001893!3.30e-12!29;UBERON:0003056!9.28e-12!49;UBERON:0001049!1.09e-11!52;UBERON:0005068!1.09e-11!52;UBERON:0006241!1.09e-11!52;UBERON:0007135!1.09e-11!52;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0000033!2.40e-11!63;UBERON:0000073!4.17e-11!75;UBERON:0001016!4.17e-11!75;UBERON:0000955!4.84e-11!50;UBERON:0006238!4.84e-11!50;UBERON:0003080!6.74e-11!40;UBERON:0002780!1.09e-10!39;UBERON:0001890!1.09e-10!39;UBERON:0006240!1.09e-10!39;UBERON:0002616!1.64e-10!49;UBERON:0000956!2.92e-09!21;UBERON:0001869!2.92e-09!21;UBERON:0000203!2.92e-09!21;UBERON:0002346!8.21e-09!71;UBERON:0003075!8.21e-09!71;UBERON:0007284!8.21e-09!71;UBERON:0002370!2.31e-08!23;UBERON:0000974!2.31e-08!23;UBERON:0004807!2.31e-08!23;UBERON:0005058!2.31e-08!23;UBERON:0003351!2.31e-08!23;UBERON:0009113!2.31e-08!23;UBERON:0003295!2.31e-08!23;UBERON:0009722!2.31e-08!23;UBERON:0005562!2.31e-08!23;UBERON:0007690!2.31e-08!23;UBERON:0004121!4.08e-08!102;UBERON:0000924!4.08e-08!102;UBERON:0006601!4.08e-08!102;UBERON:0006562!4.14e-08!24;UBERON:0001557!4.14e-08!24;UBERON:0001042!4.14e-08!24;UBERON:0008814!4.14e-08!24;UBERON:0009145!4.14e-08!24;UBERON:0003408!2.51e-07!24;UBERON:0002619!6.77e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,7.08e-14,34;UBERON:0002346,1.99e-12,64;UBERON:0003075,1.99e-12,64;UBERON:0007284,1.99e-12,64;UBERON:0003528,3.30e-12,29;UBERON:0002791,3.30e-12,29;UBERON:0001893,3.30e-12,29;UBERON:0000073,3.55e-12,54;UBERON:0010371,4.84e-12,73;UBERON:0003056,9.28e-12,49;UBERON:0001049,1.09e-11,52;UBERON:0005068,1.09e-11,52;UBERON:0006241,1.09e-11,52;UBERON:0007135,1.09e-11,52;UBERON:0001017,1.16e-11,73;UBERON:0001016,4.17e-11,75;UBERON:0003080,6.74e-11,40;UBERON:0004121,7.67e-11,95;UBERON:0000924,7.67e-11,95;UBERON:0006601,7.67e-11,95;UBERON:0002780,1.09e-10,39;UBERON:0001890,1.09e-10,39;UBERON:0006240,1.09e-10,39;UBERON:0000955,2.00e-10,47;UBERON:0006238,2.00e-10,47;UBERON:0002616,6.69e-10,46;UBERON:0000956,2.92e-09,21;UBERON:0001869,2.92e-09,21;UBERON:0000203,2.92e-09,21;UBERON:0002370,2.31e-08,23;UBERON:0000974,2.31e-08,23;UBERON:0004807,2.31e-08,23;UBERON:0005058,2.31e-08,23;UBERON:0003351,2.31e-08,23;UBERON:0009113,2.31e-08,23;UBERON:0003295,2.31e-08,23;UBERON:0009722,2.31e-08,23;UBERON:0005562,2.31e-08,23;UBERON:0007690,2.31e-08,23;UBERON:0000153,4.12e-08,43;UBERON:0006562,4.14e-08,24;UBERON:0001557,4.14e-08,24;UBERON:0001042,4.14e-08,24;UBERON:0008814,4.14e-08,24;UBERON:0009145,4.14e-08,24;UBERON:0007811,4.78e-08,36;UBERON:0010314,1.55e-07,92;UBERON:0003408,2.51e-07,24;UBERON:0000483,2.51e-07,174;UBERON:0002619,6.77e-07,17;UBERON:0000119,9.38e-07,176 | |||
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| |||
|short_description=p1@Angel2 | |||
}} |
Revision as of 20:05, 13 September 2013
Short description: | p1@Angel2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Angel2_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_NM_021421, NR_037578, NR_037579, uc007ebk.2, uc007ebl.2, uc007ebm.2, uc007ebn.2, uc007ebo.2_5end |
EntrezGene: | Angel2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.75e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.75e-10 | 23 |
neuron | 6.75e-09 | 33 |
neuronal stem cell | 6.75e-09 | 33 |
neuroblast | 6.75e-09 | 33 |
electrically signaling cell | 6.75e-09 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.