FFCP PHASE1:Mm9::chr12:111685453..111685469,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26931|HGNC=|UniProt=F6SCV1|association_with_transcript=-48bp_to_ENSMUST00000065483_5end|description=CAGE_peak_6_at_Ppp2r5c_5end|id=chr12:111685453..111685469,+|ontology_enrichment_celltype=CL:0000117!1.87e-09!23;CL:0000337!1.87e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,7.80e-11,23;CL:0000337,7.80e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.46e-14!34;UBERON:0001049!1.16e-13!52;UBERON:0005068!1.16e-13!52;UBERON:0006241!1.16e-13!52;UBERON:0007135!1.16e-13!52;UBERON:0002616!4.00e-12!49;UBERON:0002791!5.01e-12!29;UBERON:0003528!5.01e-12!29;UBERON:0001893!5.01e-12!29;UBERON:0001017!7.14e-12!73;UBERON:0005743!7.14e-12!73;UBERON:0000955!2.58e-11!50;UBERON:0006238!2.58e-11!50;UBERON:0000073!3.87e-11!75;UBERON:0001016!3.87e-11!75;UBERON:0000033!1.96e-10!63;UBERON:0003080!2.40e-10!40;UBERON:0003056!3.29e-10!49;UBERON:0002346!5.60e-10!71;UBERON:0003075!5.60e-10!71;UBERON:0007284!5.60e-10!71;UBERON:0002780!7.72e-10!39;UBERON:0001890!7.72e-10!39;UBERON:0006240!7.72e-10!39;UBERON:0000956!4.88e-09!21;UBERON:0001869!4.88e-09!21;UBERON:0000203!4.88e-09!21;UBERON:0004121!7.34e-09!102;UBERON:0000924!7.34e-09!102;UBERON:0006601!7.34e-09!102;UBERON:0002619!5.81e-08!17;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.49e-22,54;UBERON:0001049,8.53e-21,52;UBERON:0005068,8.53e-21,52;UBERON:0006241,8.53e-21,52;UBERON:0007135,8.53e-21,52;UBERON:0002020,5.17e-19,34;UBERON:0001017,2.43e-18,73;UBERON:0002346,1.66e-17,64;UBERON:0003075,1.66e-17,64;UBERON:0007284,1.66e-17,64;UBERON:0001016,1.81e-17,75;UBERON:0002616,9.24e-16,46;UBERON:0010371,1.78e-15,73;UBERON:0000955,3.32e-15,47;UBERON:0006238,3.32e-15,47;UBERON:0003528,7.92e-15,29;UBERON:0002791,7.92e-15,29;UBERON:0001893,7.92e-15,29;UBERON:0004121,1.45e-14,95;UBERON:0000924,1.45e-14,95;UBERON:0006601,1.45e-14,95;UBERON:0003080,4.06e-14,40;UBERON:0002780,2.74e-13,39;UBERON:0001890,2.74e-13,39;UBERON:0006240,2.74e-13,39;UBERON:0003056,1.29e-12,49;UBERON:0002021,1.43e-11,10;UBERON:0000411,1.43e-11,10;UBERON:0001950,1.43e-11,10;UBERON:0002619,1.61e-10,17;UBERON:0000956,2.22e-10,21;UBERON:0001869,2.22e-10,21;UBERON:0000203,2.22e-10,21;UBERON:0010314,1.17e-09,92;UBERON:0011216,4.28e-08,194;UBERON:0003076,1.36e-07,12;UBERON:0003057,1.36e-07,12;UBERON:0002240,8.44e-07,6;UBERON:0005174,8.44e-07,6;UBERON:0001137,8.44e-07,6|phase1_expression=0.320297694209588,3.83872948403297,1.36499771816861,10.2837831844322,7.01254021924886,0.503637815735669,0.700837921786577,0.645616617207881,0.140788722151667,0,0.171217968225505,0.159544317990673,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0,0,2.12608225377674,0.397163804803541,0.522399578277871,2.23989391910769,1.83527424853736,1.14846392823004,1.29228598847722,1.50829862880122,2.47030445293286,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,2.09409497589519,0.588231488031014,0.683045484958446,0.971020706062307,0,0,0.183546752161682,0,0.218025156380447,0.439372365468944,1.36100929351998,0.699932108126813,0,0.335565212115473,0.725362142011344,0.672187598284928,1.28629718017973,0.573066879877513,0,1.41621522601718,1.5869729378161,1.90149421051854,0.677689064138264,0,0,1.97773272513395,0,0.299600110518405,1.15265491596466,1.34796496001021,0.945041568321835,0.841299845405528,2.28520787523043,2.42955395046775,0.61245399607477,1.0543001812006,0.919218786610021,1.10115880999389,7.2781782708557,3.99376986466233,1.45074916503213,1.55528994124096,2.6045668527838,3.90856198601933,0.56276261003168,4.27835093775068,3.53554302568401,2.98980529678116,1.1183966749518,0.227178579999552,0.226714680320357,1.44932244350839,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.280888840263504,0.511290967734173,0,0.70667914902068,0,0,0,0,0,0.506719730950197,0,1.59857431606684,1.03575153458869,0.445326417194474,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0.628332956648377,0,0.722996784599558,0.884610551949874,0.323533699894818,0.220841518460394,0.969750506270444,0,1.75668478206928,1.25668024088073,0.766371165625774,0.479260498023681,0,0.254140454146129,2.84602214869163,1.83000241127451,1.00523481690292,2.9550134432687,1.27857728665165,2.49345653471472,1.29793010454206,0.81471491080253,0.622034853050465,0.505445516867349,2.10441855886474,0.390361328888111,0.459804208866946,1.0803727788321,0.150704817835715,0.476255494059295,0.768682321709099,0.655912071918102,1.03481348295606,0.862271971731369,0.378212160335639,0.351902248327898,0.876782929710299,0.556094498451196,1.0447564995665,0.61734640922383,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0,0.946978942340841,1.18058539048442,0.308534225774757,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.985004784474571,0.56748166682099,0.292399974850665,0.878200461164203,0.402619256281115,2.94405927989778,1.23485534855141,3.304187829837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| ||
|EntrezGene=26931 | |||
|HGNC= | |||
|UniProt=F6SCV1 | |||
|association_with_transcript=-48bp_to_ENSMUST00000065483_5end | |||
|description=CAGE_peak_6_at_Ppp2r5c_5end | |||
|id=chr12:111685453..111685469,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.87e-09!23;CL:0000337!1.87e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.80e-11,23;CL:0000337,7.80e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.46e-14!34;UBERON:0001049!1.16e-13!52;UBERON:0005068!1.16e-13!52;UBERON:0006241!1.16e-13!52;UBERON:0007135!1.16e-13!52;UBERON:0002616!4.00e-12!49;UBERON:0002791!5.01e-12!29;UBERON:0003528!5.01e-12!29;UBERON:0001893!5.01e-12!29;UBERON:0001017!7.14e-12!73;UBERON:0005743!7.14e-12!73;UBERON:0000955!2.58e-11!50;UBERON:0006238!2.58e-11!50;UBERON:0000073!3.87e-11!75;UBERON:0001016!3.87e-11!75;UBERON:0000033!1.96e-10!63;UBERON:0003080!2.40e-10!40;UBERON:0003056!3.29e-10!49;UBERON:0002346!5.60e-10!71;UBERON:0003075!5.60e-10!71;UBERON:0007284!5.60e-10!71;UBERON:0002780!7.72e-10!39;UBERON:0001890!7.72e-10!39;UBERON:0006240!7.72e-10!39;UBERON:0000956!4.88e-09!21;UBERON:0001869!4.88e-09!21;UBERON:0000203!4.88e-09!21;UBERON:0004121!7.34e-09!102;UBERON:0000924!7.34e-09!102;UBERON:0006601!7.34e-09!102;UBERON:0002619!5.81e-08!17;UBERON:0002021!2.68e-07!10;UBERON:0000411!2.68e-07!10;UBERON:0001950!2.68e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.49e-22,54;UBERON:0001049,8.53e-21,52;UBERON:0005068,8.53e-21,52;UBERON:0006241,8.53e-21,52;UBERON:0007135,8.53e-21,52;UBERON:0002020,5.17e-19,34;UBERON:0001017,2.43e-18,73;UBERON:0002346,1.66e-17,64;UBERON:0003075,1.66e-17,64;UBERON:0007284,1.66e-17,64;UBERON:0001016,1.81e-17,75;UBERON:0002616,9.24e-16,46;UBERON:0010371,1.78e-15,73;UBERON:0000955,3.32e-15,47;UBERON:0006238,3.32e-15,47;UBERON:0003528,7.92e-15,29;UBERON:0002791,7.92e-15,29;UBERON:0001893,7.92e-15,29;UBERON:0004121,1.45e-14,95;UBERON:0000924,1.45e-14,95;UBERON:0006601,1.45e-14,95;UBERON:0003080,4.06e-14,40;UBERON:0002780,2.74e-13,39;UBERON:0001890,2.74e-13,39;UBERON:0006240,2.74e-13,39;UBERON:0003056,1.29e-12,49;UBERON:0002021,1.43e-11,10;UBERON:0000411,1.43e-11,10;UBERON:0001950,1.43e-11,10;UBERON:0002619,1.61e-10,17;UBERON:0000956,2.22e-10,21;UBERON:0001869,2.22e-10,21;UBERON:0000203,2.22e-10,21;UBERON:0010314,1.17e-09,92;UBERON:0011216,4.28e-08,194;UBERON:0003076,1.36e-07,12;UBERON:0003057,1.36e-07,12;UBERON:0002240,8.44e-07,6;UBERON:0005174,8.44e-07,6;UBERON:0001137,8.44e-07,6 | |||
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| |||
|short_description=p6@Ppp2r5c | |||
}} | |||
Revision as of 22:17, 12 September 2013
| Short description: | p6@Ppp2r5c |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Ppp2r5c_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -48bp_to_ENSMUST00000065483_5end |
| EntrezGene: | Ppp2r5c |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 7.80e-11 | 23 |
| neuroblast (sensu Vertebrata) | 7.80e-11 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
