FFCP PHASE1:Mm9::chrX:133572653..133572666,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133572653..133572666,+|id=chrX:133572653..133572666,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000624,1.51e-09,8;CL:0000815,3.04e-09,1;CL:0000792,3.04e-09,1;CL:0000355,1.41e-08,9;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000084,4.30e-07,11;CL:0000827,4.30e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.96e-24,3;DOID:4045,1.96e-24,3;DOID:0050686,2.18e-21,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-08,9;UBERON:0002036,1.41e-08,9;UBERON:0002385,1.41e-08,9;UBERON:0000486,1.41e-08,9;UBERON:0007503,1.41e-08,9;UBERON:0001015,1.41e-08,9;UBERON:0002329,1.41e-08,9;UBERON:0003082,1.41e-08,9;UBERON:0003059,1.41e-08,9;UBERON:0007282,1.41e-08,9;UBERON:0004290,1.41e-08,9;UBERON:0009618,1.41e-08,9;UBERON:0000383,8.98e-08,10;UBERON:0007524,4.09e-07,11;UBERON:0003077,4.09e-07,11;UBERON:0007285,4.09e-07,11|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,1.67860320474049,0.422366166455,0.234064526321993,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0.577703239502549,0.166234645358492,0,2.09265815368454,2.3440060335714,1.0470474879476,9.99993529652724,5.46436387966757,4.36959317728038,0,0.101376931219515,0,0,0,0,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.760079596425296,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,1.09899109488962,0.493588655687202,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0.23467170806371,0.847328283455281,0,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0.234714477291508,0.2604087696879,0.314578033277133,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p@chrX:133572653..133572666,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133572653..133572666,+ | |||
|id=chrX:133572653..133572666,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.51e-09,8;CL:0000815,3.04e-09,1;CL:0000792,3.04e-09,1;CL:0000355,1.41e-08,9;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000084,4.30e-07,11;CL:0000827,4.30e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.96e-24,3;DOID:4045,1.96e-24,3;DOID:0050686,2.18e-21,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.41e-08,9;UBERON:0002036,1.41e-08,9;UBERON:0002385,1.41e-08,9;UBERON:0000486,1.41e-08,9;UBERON:0007503,1.41e-08,9;UBERON:0001015,1.41e-08,9;UBERON:0002329,1.41e-08,9;UBERON:0003082,1.41e-08,9;UBERON:0003059,1.41e-08,9;UBERON:0007282,1.41e-08,9;UBERON:0004290,1.41e-08,9;UBERON:0009618,1.41e-08,9;UBERON:0000383,8.98e-08,10;UBERON:0007524,4.09e-07,11;UBERON:0003077,4.09e-07,11;UBERON:0007285,4.09e-07,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,1.67860320474049,0.422366166455,0.234064526321993,0.34243593645101,0.239316476986009,1.71200729931206,1.31130603628496,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0.61506478758457,0,0.577703239502549,0.166234645358492,0,2.09265815368454,2.3440060335714,1.0470474879476,9.99993529652724,5.46436387966757,4.36959317728038,0,0.101376931219515,0,0,0,0,0,0,0,0.503347818173209,0,0.672187598284928,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0.182975287204819,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.760079596425296,0,0,0.776813650941515,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0.433798070759735,0.884610551949874,0,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.239630249011841,0.599902730993408,0.127070227073065,0.449371918214468,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0.442830443938806,1.09899109488962,0.493588655687202,0,0,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0,0.534196811001766,0.162886959353576,0,0,0,0,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0.23467170806371,0.847328283455281,0,0.49465875882444,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,0.56369293868419,0,0,0,0,0,0.234714477291508,0.2604087696879,0.314578033277133,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0.443971906748129,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.377252682772152,0.37456602987953,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p@chrX:133572653..133572666,+ | |||
}} |
Revision as of 19:22, 14 September 2013
Short description: | p@chrX:133572653..133572666, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133572653..133572666, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.51e-09 | 8 |
regulatory T cell | 3.04e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.04e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.41e-08 | 9 |
mature alpha-beta T cell | 1.50e-08 | 9 |
alpha-beta T cell | 1.50e-08 | 9 |
immature T cell | 1.50e-08 | 9 |
mature T cell | 1.50e-08 | 9 |
immature alpha-beta T cell | 1.50e-08 | 9 |
T cell | 4.30e-07 | 11 |
pro-T cell | 4.30e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.41e-08 | 9 |
striated muscle tissue | 1.41e-08 | 9 |
muscle tissue | 1.41e-08 | 9 |
multilaminar epithelium | 1.41e-08 | 9 |
epithelial vesicle | 1.41e-08 | 9 |
musculature | 1.41e-08 | 9 |
somite | 1.41e-08 | 9 |
myotome | 1.41e-08 | 9 |
presomitic mesoderm | 1.41e-08 | 9 |
presumptive segmental plate | 1.41e-08 | 9 |
dermomyotome | 1.41e-08 | 9 |
trunk paraxial mesoderm | 1.41e-08 | 9 |
musculature of body | 8.98e-08 | 10 |
dense mesenchyme tissue | 4.09e-07 | 11 |
paraxial mesoderm | 4.09e-07 | 11 |
presumptive paraxial mesoderm | 4.09e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.96e-24 | 3 |
muscle cancer | 1.96e-24 | 3 |
organ system cancer | 2.18e-21 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.