FFCP PHASE1:Mm9::chr6:48650528..48650539,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=962|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48650528..48650539,+|id=chr6:48650528..48650539,+|ontology_enrichment_celltype=CL:0000838!5.44e-12!12;CL:0000988!5.79e-12!32;CL:0002032!5.79e-12!32;CL:0000037!5.79e-12!32;CL:0000566!5.79e-12!32;CL:0000837!5.79e-12!32;CL:0002031!9.24e-12!25;CL:0000542!5.97e-11!13;CL:0000051!5.97e-11!13;CL:0000624!1.10e-10!8;CL:0000893!4.55e-10!6;CL:0002489!4.55e-10!6;CL:0000898!4.55e-10!6;CL:0000809!4.55e-10!6;CL:0000810!4.55e-10!6;CL:0000895!4.55e-10!6;CL:0000808!4.55e-10!6;CL:0000894!4.55e-10!6;CL:0000806!4.55e-10!6;CL:0000807!4.55e-10!6;CL:0000805!4.55e-10!6;CL:0002425!4.55e-10!6;CL:0002436!4.55e-10!6;CL:0002427!4.55e-10!6;CL:0002428!4.55e-10!6;CL:0002429!4.55e-10!6;CL:0002433!4.55e-10!6;CL:0002431!4.55e-10!6;CL:0002432!4.55e-10!6;CL:0000084!5.41e-10!11;CL:0000827!5.41e-10!11;CL:0000791!2.11e-09!9;CL:0000789!2.11e-09!9;CL:0002420!2.11e-09!9;CL:0002419!2.11e-09!9;CL:0000790!2.11e-09!9;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000738!5.12e-08!17;CL:0002087!5.12e-08!17;CL:0000553!7.31e-07!6;CL:0000556!7.31e-07!6;CL:0000219!7.79e-07!54|ontology_enrichment_celltype_v019_2=CL:0002031,2.47e-15,25;CL:0000553,1.58e-12,6;CL:0000556,1.58e-12,6;CL:0000988,6.58e-12,32;CL:0002032,6.58e-12,32;CL:0000037,6.58e-12,32;CL:0000837,6.58e-12,32;CL:0000838,4.59e-11,12;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000542,3.08e-10,13;CL:0000051,3.08e-10,13;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000815,1.19e-09,1;CL:0000792,1.19e-09,1;CL:0000624,1.51e-09,8;CL:0000213,2.09e-09,1;CL:0002078,2.09e-09,1;CL:0000115,2.09e-09,1;CL:0002262,2.09e-09,1;CL:1000398,2.09e-09,1;CL:0000034,2.81e-09,97;CL:0000219,5.46e-09,54;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000050,1.50e-08,9;CL:0000738,6.84e-08,17;CL:0002087,6.84e-08,17;CL:0000084,4.30e-07,11;CL:0000827,4.30e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.25e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-10,46;UBERON:0002394,2.09e-09,1;UBERON:0001281,2.09e-09,1;UBERON:0000353,2.09e-09,1;UBERON:0003497,2.09e-09,1;UBERON:0003909,2.09e-09,1;UBERON:0003928,2.09e-09,1;UBERON:0003835,2.09e-09,1;UBERON:0003513,2.09e-09,1;UBERON:0001280,2.09e-09,1;UBERON:0004647,2.09e-09,1;UBERON:0002294,2.09e-09,1;UBERON:0001173,2.09e-09,1;UBERON:0004912,2.09e-09,1;UBERON:0005171,2.09e-09,1|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.84071311571468,1.40788722151667,0.936258105287974,0.34243593645101,0,1.19840510951844,0.961624426608971,0,0.404950534779652,0,1.57731082679119,1.64537320326887,1.69755860719212,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.457556346413045,2.71965487990169,2.37917468950219,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:48650528..48650539,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=962 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:48650528..48650539,+ | |||
|id=chr6:48650528..48650539,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.44e-12!12;CL:0000988!5.79e-12!32;CL:0002032!5.79e-12!32;CL:0000037!5.79e-12!32;CL:0000566!5.79e-12!32;CL:0000837!5.79e-12!32;CL:0002031!9.24e-12!25;CL:0000542!5.97e-11!13;CL:0000051!5.97e-11!13;CL:0000624!1.10e-10!8;CL:0000893!4.55e-10!6;CL:0002489!4.55e-10!6;CL:0000898!4.55e-10!6;CL:0000809!4.55e-10!6;CL:0000810!4.55e-10!6;CL:0000895!4.55e-10!6;CL:0000808!4.55e-10!6;CL:0000894!4.55e-10!6;CL:0000806!4.55e-10!6;CL:0000807!4.55e-10!6;CL:0000805!4.55e-10!6;CL:0002425!4.55e-10!6;CL:0002436!4.55e-10!6;CL:0002427!4.55e-10!6;CL:0002428!4.55e-10!6;CL:0002429!4.55e-10!6;CL:0002433!4.55e-10!6;CL:0002431!4.55e-10!6;CL:0002432!4.55e-10!6;CL:0000084!5.41e-10!11;CL:0000827!5.41e-10!11;CL:0000791!2.11e-09!9;CL:0000789!2.11e-09!9;CL:0002420!2.11e-09!9;CL:0002419!2.11e-09!9;CL:0000790!2.11e-09!9;CL:0002320!1.25e-08!46;CL:0000134!1.25e-08!46;CL:0000738!5.12e-08!17;CL:0002087!5.12e-08!17;CL:0000553!7.31e-07!6;CL:0000556!7.31e-07!6;CL:0000219!7.79e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.47e-15,25;CL:0000553,1.58e-12,6;CL:0000556,1.58e-12,6;CL:0000988,6.58e-12,32;CL:0002032,6.58e-12,32;CL:0000037,6.58e-12,32;CL:0000837,6.58e-12,32;CL:0000838,4.59e-11,12;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000542,3.08e-10,13;CL:0000051,3.08e-10,13;CL:0000945,9.82e-10,1;CL:0000236,9.82e-10,1;CL:0000826,9.82e-10,1;CL:0000815,1.19e-09,1;CL:0000792,1.19e-09,1;CL:0000624,1.51e-09,8;CL:0000213,2.09e-09,1;CL:0002078,2.09e-09,1;CL:0000115,2.09e-09,1;CL:0002262,2.09e-09,1;CL:1000398,2.09e-09,1;CL:0000034,2.81e-09,97;CL:0000219,5.46e-09,54;CL:0000791,1.50e-08,9;CL:0000789,1.50e-08,9;CL:0002420,1.50e-08,9;CL:0002419,1.50e-08,9;CL:0000790,1.50e-08,9;CL:0000050,1.50e-08,9;CL:0000738,6.84e-08,17;CL:0002087,6.84e-08,17;CL:0000084,4.30e-07,11;CL:0000827,4.30e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.25e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-10,46;UBERON:0002394,2.09e-09,1;UBERON:0001281,2.09e-09,1;UBERON:0000353,2.09e-09,1;UBERON:0003497,2.09e-09,1;UBERON:0003909,2.09e-09,1;UBERON:0003928,2.09e-09,1;UBERON:0003835,2.09e-09,1;UBERON:0003513,2.09e-09,1;UBERON:0001280,2.09e-09,1;UBERON:0004647,2.09e-09,1;UBERON:0002294,2.09e-09,1;UBERON:0001173,2.09e-09,1;UBERON:0004912,2.09e-09,1;UBERON:0005171,2.09e-09,1 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,2.84071311571468,1.40788722151667,0.936258105287974,0.34243593645101,0,1.19840510951844,0.961624426608971,0,0.404950534779652,0,1.57731082679119,1.64537320326887,1.69755860719212,0,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.838705871541442,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0,0,0,0,0.457556346413045,2.71965487990169,2.37917468950219,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:48650528..48650539,+ | |||
}} |
Revision as of 10:07, 14 September 2013
Short description: | p@chr6:48650528..48650539, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48650528..48650539, + |
Coexpression cluster: | MCL_coexpression_mm9:962 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.19e-10 | 46 |
bile duct | 2.09e-09 | 1 |
hepatic sinusoid | 2.09e-09 | 1 |
parenchyma | 2.09e-09 | 1 |
abdomen blood vessel | 2.09e-09 | 1 |
sinusoid | 2.09e-09 | 1 |
digestive system duct | 2.09e-09 | 1 |
abdominal segment blood vessel | 2.09e-09 | 1 |
trunk blood vessel | 2.09e-09 | 1 |
liver parenchyma | 2.09e-09 | 1 |
liver lobule | 2.09e-09 | 1 |
biliary system | 2.09e-09 | 1 |
biliary tree | 2.09e-09 | 1 |
biliary bud | 2.09e-09 | 1 |
hepatic duct | 2.09e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.