FFCP PHASE1:Mm9::chr7:30568977..30569047,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22693|HGNC=|MCL_coexpression_id=321|UniProt=Q78FW7|association_with_transcript=0bp_to_ENSMUST00000032803,ENSMUST00000126504_5end|description=CAGE_peak_1_at_Zfp30_5end|id=chr7:30568977..30569047,+|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-07,23;CL:0000337,1.27e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!7.49e-21!63;UBERON:0003056!1.29e-19!49;UBERON:0002346!1.65e-19!71;UBERON:0003075!1.65e-19!71;UBERON:0007284!1.65e-19!71;UBERON:0000955!1.05e-18!50;UBERON:0006238!1.05e-18!50;UBERON:0002616!1.65e-18!49;UBERON:0001049!8.69e-18!52;UBERON:0005068!8.69e-18!52;UBERON:0006241!8.69e-18!52;UBERON:0007135!8.69e-18!52;UBERON:0003080!4.92e-17!40;UBERON:0002780!2.42e-16!39;UBERON:0001890!2.42e-16!39;UBERON:0006240!2.42e-16!39;UBERON:0004121!2.96e-15!102;UBERON:0000924!2.96e-15!102;UBERON:0006601!2.96e-15!102;UBERON:0001017!5.92e-15!73;UBERON:0005743!5.92e-15!73;UBERON:0000073!3.22e-14!75;UBERON:0001016!3.22e-14!75;UBERON:0002791!7.29e-12!29;UBERON:0003528!7.29e-12!29;UBERON:0001893!7.29e-12!29;UBERON:0002020!2.23e-11!34;UBERON:0000025!3.98e-11!114;UBERON:0000153!8.01e-11!94;UBERON:0004111!1.32e-10!122;UBERON:0000468!1.45e-10!333;UBERON:0007811!9.44e-10!86;UBERON:0000956!6.63e-09!21;UBERON:0001869!6.63e-09!21;UBERON:0000203!6.63e-09!21;UBERON:0000922!1.84e-08!328;UBERON:0002619!9.49e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.04e-19,49;UBERON:0010314,1.32e-19,92;UBERON:0002346,1.45e-19,64;UBERON:0003075,1.45e-19,64;UBERON:0007284,1.45e-19,64;UBERON:0000955,3.17e-18,47;UBERON:0006238,3.17e-18,47;UBERON:0000073,3.22e-18,54;UBERON:0002616,4.88e-18,46;UBERON:0001049,7.14e-18,52;UBERON:0005068,7.14e-18,52;UBERON:0006241,7.14e-18,52;UBERON:0007135,7.14e-18,52;UBERON:0010371,2.31e-17,73;UBERON:0003080,4.08e-17,40;UBERON:0002780,2.03e-16,39;UBERON:0001890,2.03e-16,39;UBERON:0006240,2.03e-16,39;UBERON:0001017,5.37e-15,73;UBERON:0004121,8.44e-15,95;UBERON:0000924,8.44e-15,95;UBERON:0006601,8.44e-15,95;UBERON:0001016,2.94e-14,75;UBERON:0003528,6.44e-12,29;UBERON:0002791,6.44e-12,29;UBERON:0001893,6.44e-12,29;UBERON:0002020,1.98e-11,34;UBERON:0000025,5.74e-11,114;UBERON:0004111,1.87e-10,122;UBERON:0000956,6.07e-09,21;UBERON:0001869,6.07e-09,21;UBERON:0000203,6.07e-09,21;UBERON:0000922,9.12e-09,320;UBERON:0002619,8.91e-07,17|phase1_expression=6.88640042550614,0,0,0.30246421130683,0.500895729946347,0.503637815735669,0.700837921786577,1.16210991097419,0,0,0,0.0797721589953364,0.513602189793617,1.39872643870396,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,2.97651515528744,0.595745707205312,0,0.319984845586813,0.22940928106717,0,0,0.646413698057667,0.380046838912748,0.252030129759931,0.221730510655305,2.54012269383853,0.61506478758457,0,0.288851619751275,1.16364251750945,0.408338712524738,0,0,0,0,0,0,4.02869817521847,4.56196190487815,5.32285581268876,2.34717403304412,1.74420125104357,2.41654801007919,1.94429899074283,3.49966054063406,0,0.671130424230945,1.45072428402269,0.336093799142464,1.02903774414379,0.85960031981627,2.06268836910977,10.3181395038395,9.52183762689659,6.97214543856797,1.0165335962074,1.77858959222228,0.899899717281399,0.988866362566974,0,0.898800331555214,1.15265491596466,10.7837196800817,12.2855403881839,10.0955981448663,4.28476476605705,5.52171352379034,11.5141351262057,14.5685115947719,11.9498442259303,8.8092704799511,6.38436690425939,5.9906547969935,9.62769900430415,13.4486836095542,13.022834263919,8.09630697104005,3.37657566019008,8.25110537994775,4.12480019663135,5.69486723196412,7.45597783301202,1.8931548333296,2.79614772395106,4.63783181922684,0.860423876981386,0.679971333707751,3.77792234146472,7.79731700937203,1.79210754838934,3.08977724289854,2.55645483867087,1.81850203222008,1.41335829804136,3.94361575374705,0,0,7.11066703153331,0.865964164044856,0.760079596425296,0.505524445014783,1.94112595522402,0,4.45326417194474,7.28638372417771,4.87144765299426,6.45723392316964,5.27529241934179,5.64425794251383,4.64966387919799,1.73036477414062,4.48258006451726,0,4.69123864847487,3.09178125844551,1.93950101254089,1.86391761218122,12.5895742714965,12.7762491156208,1.02182822083437,0.599075622529601,1.19980546198682,0.254140454146129,13.7807388252437,8.23501085073528,21.9895116197513,11.8200537730748,10.7400492078739,12.4672826735736,11.6813709408785,12.0170449343373,3.73220911830279,1.26361379216837,4.41927897361595,7.93734702072493,6.89706313300419,8.28285797104606,11.1521565198429,9.66118287948856,7.94305065766069,10.9631017734883,5.69147415625834,4.31135985865684,10.4008344092301,8.2697028357056,8.76782929710299,8.34141747676794,6.268538997399,6.37924622864625,11.5439874754726,0,0.257347907114715,0.284163499395593,2.89976081549703,2.57978665979206,4.32148947506436,4.7348947117042,8.26409773339096,5.55361606394562,5.34828072925938,8.04820204198858,9.10769670463922,8.06343264576054,6.07419617092652,8.10688095458557,6.87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| ||
|EntrezGene=22693 | |||
|HGNC= | |||
|MCL_coexpression_id=321 | |||
|UniProt=Q78FW7 | |||
|association_with_transcript=0bp_to_ENSMUST00000032803,ENSMUST00000126504_5end | |||
|description=CAGE_peak_1_at_Zfp30_5end | |||
|id=chr7:30568977..30569047,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.37e-07!23;CL:0000337!1.37e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-07,23;CL:0000337,1.27e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.49e-21!63;UBERON:0003056!1.29e-19!49;UBERON:0002346!1.65e-19!71;UBERON:0003075!1.65e-19!71;UBERON:0007284!1.65e-19!71;UBERON:0000955!1.05e-18!50;UBERON:0006238!1.05e-18!50;UBERON:0002616!1.65e-18!49;UBERON:0001049!8.69e-18!52;UBERON:0005068!8.69e-18!52;UBERON:0006241!8.69e-18!52;UBERON:0007135!8.69e-18!52;UBERON:0003080!4.92e-17!40;UBERON:0002780!2.42e-16!39;UBERON:0001890!2.42e-16!39;UBERON:0006240!2.42e-16!39;UBERON:0004121!2.96e-15!102;UBERON:0000924!2.96e-15!102;UBERON:0006601!2.96e-15!102;UBERON:0001017!5.92e-15!73;UBERON:0005743!5.92e-15!73;UBERON:0000073!3.22e-14!75;UBERON:0001016!3.22e-14!75;UBERON:0002791!7.29e-12!29;UBERON:0003528!7.29e-12!29;UBERON:0001893!7.29e-12!29;UBERON:0002020!2.23e-11!34;UBERON:0000025!3.98e-11!114;UBERON:0000153!8.01e-11!94;UBERON:0004111!1.32e-10!122;UBERON:0000468!1.45e-10!333;UBERON:0007811!9.44e-10!86;UBERON:0000956!6.63e-09!21;UBERON:0001869!6.63e-09!21;UBERON:0000203!6.63e-09!21;UBERON:0000922!1.84e-08!328;UBERON:0002619!9.49e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.04e-19,49;UBERON:0010314,1.32e-19,92;UBERON:0002346,1.45e-19,64;UBERON:0003075,1.45e-19,64;UBERON:0007284,1.45e-19,64;UBERON:0000955,3.17e-18,47;UBERON:0006238,3.17e-18,47;UBERON:0000073,3.22e-18,54;UBERON:0002616,4.88e-18,46;UBERON:0001049,7.14e-18,52;UBERON:0005068,7.14e-18,52;UBERON:0006241,7.14e-18,52;UBERON:0007135,7.14e-18,52;UBERON:0010371,2.31e-17,73;UBERON:0003080,4.08e-17,40;UBERON:0002780,2.03e-16,39;UBERON:0001890,2.03e-16,39;UBERON:0006240,2.03e-16,39;UBERON:0001017,5.37e-15,73;UBERON:0004121,8.44e-15,95;UBERON:0000924,8.44e-15,95;UBERON:0006601,8.44e-15,95;UBERON:0001016,2.94e-14,75;UBERON:0003528,6.44e-12,29;UBERON:0002791,6.44e-12,29;UBERON:0001893,6.44e-12,29;UBERON:0002020,1.98e-11,34;UBERON:0000025,5.74e-11,114;UBERON:0004111,1.87e-10,122;UBERON:0000956,6.07e-09,21;UBERON:0001869,6.07e-09,21;UBERON:0000203,6.07e-09,21;UBERON:0000922,9.12e-09,320;UBERON:0002619,8.91e-07,17 | |||
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| |||
|short_description=p1@Zfp30 | |||
}} |
Revision as of 13:09, 14 September 2013
Short description: | p1@Zfp30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp30_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000032803, ENSMUST00000126504_5end |
EntrezGene: | Zfp30 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.27e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.04e-19 | 49 |
structure with developmental contribution from neural crest | 1.32e-19 | 92 |
neurectoderm | 1.45e-19 | 64 |
neural plate | 1.45e-19 | 64 |
presumptive neural plate | 1.45e-19 | 64 |
brain | 3.17e-18 | 47 |
future brain | 3.17e-18 | 47 |
regional part of nervous system | 3.22e-18 | 54 |
regional part of brain | 4.88e-18 | 46 |
neural tube | 7.14e-18 | 52 |
neural rod | 7.14e-18 | 52 |
future spinal cord | 7.14e-18 | 52 |
neural keel | 7.14e-18 | 52 |
ecto-epithelium | 2.31e-17 | 73 |
anterior neural tube | 4.08e-17 | 40 |
regional part of forebrain | 2.03e-16 | 39 |
forebrain | 2.03e-16 | 39 |
future forebrain | 2.03e-16 | 39 |
central nervous system | 5.37e-15 | 73 |
ectoderm-derived structure | 8.44e-15 | 95 |
ectoderm | 8.44e-15 | 95 |
presumptive ectoderm | 8.44e-15 | 95 |
nervous system | 2.94e-14 | 75 |
brain grey matter | 6.44e-12 | 29 |
regional part of telencephalon | 6.44e-12 | 29 |
telencephalon | 6.44e-12 | 29 |
gray matter | 1.98e-11 | 34 |
tube | 5.74e-11 | 114 |
anatomical conduit | 1.87e-10 | 122 |
cerebral cortex | 6.07e-09 | 21 |
cerebral hemisphere | 6.07e-09 | 21 |
pallium | 6.07e-09 | 21 |
embryo | 9.12e-09 | 320 |
regional part of cerebral cortex | 8.91e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.