FFCP PHASE1:Mm9::chr13:58910044..58910113,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18212|HGNC=|MCL_coexpression_id=283|UniProt=B5BQV4|association_with_transcript=0bp_to_ENSMUST00000078541_5end|description=CAGE_peak_2_at_Ntrk2_5end|id=chr13:58910044..58910113,+|ontology_enrichment_celltype=CL:0000117!1.80e-10!23;CL:0000337!1.80e-10!23;CL:0000221!3.23e-10!44;CL:0000133!3.23e-10!44;CL:0002319!6.82e-10!43;CL:0000333!8.64e-07!10;CL:0000095!8.64e-07!10;CL:0000243!8.64e-07!10;CL:0000123!8.64e-07!10;CL:0000125!8.64e-07!10;CL:0000030!8.64e-07!10;CL:0000339!8.64e-07!10|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-12,23;CL:0000337,3.19e-12,23;CL:0000221,3.28e-12,44;CL:0000133,3.28e-12,44;CL:0002319,8.08e-12,43;CL:0000333,7.99e-08,10;CL:0000095,7.99e-08,10;CL:0000243,7.99e-08,10;CL:0000123,7.99e-08,10;CL:0000125,7.99e-08,10;CL:0000030,7.99e-08,10;CL:0000339,7.99e-08,10;CL:0002453,7.36e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.20e-30!102;UBERON:0000924!4.20e-30!102;UBERON:0006601!4.20e-30!102;UBERON:0000033!5.92e-28!63;UBERON:0000073!2.37e-27!75;UBERON:0001016!2.37e-27!75;UBERON:0001049!6.93e-27!52;UBERON:0005068!6.93e-27!52;UBERON:0006241!6.93e-27!52;UBERON:0007135!6.93e-27!52;UBERON:0000955!2.53e-26!50;UBERON:0006238!2.53e-26!50;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0002616!1.32e-25!49;UBERON:0002346!3.36e-24!71;UBERON:0003075!3.36e-24!71;UBERON:0007284!3.36e-24!71;UBERON:0003056!7.40e-20!49;UBERON:0003080!1.59e-19!40;UBERON:0002780!9.14e-19!39;UBERON:0001890!9.14e-19!39;UBERON:0006240!9.14e-19!39;UBERON:0002020!2.04e-17!34;UBERON:0002791!7.24e-15!29;UBERON:0003528!7.24e-15!29;UBERON:0001893!7.24e-15!29;UBERON:0007811!8.53e-15!86;UBERON:0000153!1.13e-12!94;UBERON:0004111!2.84e-11!122;UBERON:0000956!5.29e-11!21;UBERON:0001869!5.29e-11!21;UBERON:0000203!5.29e-11!21;UBERON:0002619!4.80e-10!17;UBERON:0000025!2.29e-09!114;UBERON:0003076!7.27e-08!12;UBERON:0003057!7.27e-08!12;UBERON:0002021!5.81e-07!10;UBERON:0000411!5.81e-07!10;UBERON:0001950!5.81e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-34,54;UBERON:0001016,7.61e-33,75;UBERON:0004121,9.76e-33,95;UBERON:0000924,9.76e-33,95;UBERON:0006601,9.76e-33,95;UBERON:0001049,6.89e-32,52;UBERON:0005068,6.89e-32,52;UBERON:0006241,6.89e-32,52;UBERON:0007135,6.89e-32,52;UBERON:0001017,1.48e-31,73;UBERON:0000955,1.97e-28,47;UBERON:0006238,1.97e-28,47;UBERON:0002616,1.38e-27,46;UBERON:0002346,3.16e-27,64;UBERON:0003075,3.16e-27,64;UBERON:0007284,3.16e-27,64;UBERON:0010371,3.45e-27,73;UBERON:0003080,4.60e-23,40;UBERON:0002780,3.73e-22,39;UBERON:0001890,3.73e-22,39;UBERON:0006240,3.73e-22,39;UBERON:0003056,3.84e-21,49;UBERON:0002020,1.54e-20,34;UBERON:0003528,1.75e-17,29;UBERON:0002791,1.75e-17,29;UBERON:0001893,1.75e-17,29;UBERON:0010314,4.30e-17,92;UBERON:0000956,7.37e-13,21;UBERON:0001869,7.37e-13,21;UBERON:0000203,7.37e-13,21;UBERON:0004111,2.06e-12,122;UBERON:0002619,1.03e-11,17;UBERON:0000025,3.37e-10,114;UBERON:0003076,4.16e-09,12;UBERON:0003057,4.16e-09,12;UBERON:0002021,4.98e-08,10;UBERON:0000411,4.98e-08,10;UBERON:0001950,4.98e-08,10;UBERON:0007023,1.48e-07,51|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,15.7330086779479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69434806608824,55.8144400333943,89.851648738399,125.018425104764,46.0555327147443,57.5010257459886,0,0,0,0,0,0,3.64169629547276,2.64495489636016,5.07065122804943,2.03306719241479,0.889294796111139,0,0.988866362566974,0,40.745615030503,89.9070834452438,1.97010263386108,2.43010688997043,2.10324961351382,36.8489769880907,35.5598350932098,3.42974237801871,2.49198224647415,3.67687514644008,110.115880999389,91.9348834213352,87.09490435629,2.90149833006426,3.65950574409639,2.08365348222704,91.0136576744502,105.799370685956,87.0950012327818,40.6587447953661,37.0166370077668,11.9295645328192,5.30083353332288,18.2127459857353,2.6087803983151,0,0,0,0,0,4.91555470461132,0,0,0,3.94361575374705,0,0,0,0,0,0,2.2836775943812,1.03575153458869,3.11728492036132,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,1.05829836422134,8.29399502775858,0.247194967734374,65.6481080416399,2.65383165584962,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,58.2633786052979,55.9222707191925,0,0,0,0,109.047585486711,91.5001205637253,5.90575454930463,55.4499581413362,48.3302214354325,87.6865548041344,82.9052854276242,1.01839363850316,1.61729061793121,0.758168275301024,16.6249066150314,0.650602214813519,0.229902104433473,0.900310649026746,0.90422890701429,1.7009124787832,1.92170580427275,2.24884138943349,16.815719098036,0,0,0,0,1.11218899690239,0.696504333044333,0.61734640922383,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.590292695242212,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.56748166682099,0.730999937126662,1.3173006917463,1.20785776884335,70.6574227175468,10.496270462687,0,0,0,0,0,0,0,0,0,0,0,1.193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| ||
|EntrezGene=18212 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|UniProt=B5BQV4 | |||
|association_with_transcript=0bp_to_ENSMUST00000078541_5end | |||
|description=CAGE_peak_2_at_Ntrk2_5end | |||
|id=chr13:58910044..58910113,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.80e-10!23;CL:0000337!1.80e-10!23;CL:0000221!3.23e-10!44;CL:0000133!3.23e-10!44;CL:0002319!6.82e-10!43;CL:0000333!8.64e-07!10;CL:0000095!8.64e-07!10;CL:0000243!8.64e-07!10;CL:0000123!8.64e-07!10;CL:0000125!8.64e-07!10;CL:0000030!8.64e-07!10;CL:0000339!8.64e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.19e-12,23;CL:0000337,3.19e-12,23;CL:0000221,3.28e-12,44;CL:0000133,3.28e-12,44;CL:0002319,8.08e-12,43;CL:0000333,7.99e-08,10;CL:0000095,7.99e-08,10;CL:0000243,7.99e-08,10;CL:0000123,7.99e-08,10;CL:0000125,7.99e-08,10;CL:0000030,7.99e-08,10;CL:0000339,7.99e-08,10;CL:0002453,7.36e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.20e-30!102;UBERON:0000924!4.20e-30!102;UBERON:0006601!4.20e-30!102;UBERON:0000033!5.92e-28!63;UBERON:0000073!2.37e-27!75;UBERON:0001016!2.37e-27!75;UBERON:0001049!6.93e-27!52;UBERON:0005068!6.93e-27!52;UBERON:0006241!6.93e-27!52;UBERON:0007135!6.93e-27!52;UBERON:0000955!2.53e-26!50;UBERON:0006238!2.53e-26!50;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0002616!1.32e-25!49;UBERON:0002346!3.36e-24!71;UBERON:0003075!3.36e-24!71;UBERON:0007284!3.36e-24!71;UBERON:0003056!7.40e-20!49;UBERON:0003080!1.59e-19!40;UBERON:0002780!9.14e-19!39;UBERON:0001890!9.14e-19!39;UBERON:0006240!9.14e-19!39;UBERON:0002020!2.04e-17!34;UBERON:0002791!7.24e-15!29;UBERON:0003528!7.24e-15!29;UBERON:0001893!7.24e-15!29;UBERON:0007811!8.53e-15!86;UBERON:0000153!1.13e-12!94;UBERON:0004111!2.84e-11!122;UBERON:0000956!5.29e-11!21;UBERON:0001869!5.29e-11!21;UBERON:0000203!5.29e-11!21;UBERON:0002619!4.80e-10!17;UBERON:0000025!2.29e-09!114;UBERON:0003076!7.27e-08!12;UBERON:0003057!7.27e-08!12;UBERON:0002021!5.81e-07!10;UBERON:0000411!5.81e-07!10;UBERON:0001950!5.81e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.17e-34,54;UBERON:0001016,7.61e-33,75;UBERON:0004121,9.76e-33,95;UBERON:0000924,9.76e-33,95;UBERON:0006601,9.76e-33,95;UBERON:0001049,6.89e-32,52;UBERON:0005068,6.89e-32,52;UBERON:0006241,6.89e-32,52;UBERON:0007135,6.89e-32,52;UBERON:0001017,1.48e-31,73;UBERON:0000955,1.97e-28,47;UBERON:0006238,1.97e-28,47;UBERON:0002616,1.38e-27,46;UBERON:0002346,3.16e-27,64;UBERON:0003075,3.16e-27,64;UBERON:0007284,3.16e-27,64;UBERON:0010371,3.45e-27,73;UBERON:0003080,4.60e-23,40;UBERON:0002780,3.73e-22,39;UBERON:0001890,3.73e-22,39;UBERON:0006240,3.73e-22,39;UBERON:0003056,3.84e-21,49;UBERON:0002020,1.54e-20,34;UBERON:0003528,1.75e-17,29;UBERON:0002791,1.75e-17,29;UBERON:0001893,1.75e-17,29;UBERON:0010314,4.30e-17,92;UBERON:0000956,7.37e-13,21;UBERON:0001869,7.37e-13,21;UBERON:0000203,7.37e-13,21;UBERON:0004111,2.06e-12,122;UBERON:0002619,1.03e-11,17;UBERON:0000025,3.37e-10,114;UBERON:0003076,4.16e-09,12;UBERON:0003057,4.16e-09,12;UBERON:0002021,4.98e-08,10;UBERON:0000411,4.98e-08,10;UBERON:0001950,4.98e-08,10;UBERON:0007023,1.48e-07,51 | |||
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|short_description=p2@Ntrk2 | |||
}} |
Revision as of 00:56, 13 September 2013
Short description: | p2@Ntrk2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ntrk2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 0bp_to_ENSMUST00000078541_5end |
EntrezGene: | Ntrk2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.19e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.19e-12 | 23 |
ectodermal cell | 3.28e-12 | 44 |
neurectodermal cell | 3.28e-12 | 44 |
neural cell | 8.08e-12 | 43 |
migratory neural crest cell | 7.99e-08 | 10 |
neuron associated cell | 7.99e-08 | 10 |
glial cell (sensu Vertebrata) | 7.99e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 7.99e-08 | 10 |
glial cell | 7.99e-08 | 10 |
glioblast | 7.99e-08 | 10 |
glioblast (sensu Vertebrata) | 7.99e-08 | 10 |
oligodendrocyte precursor cell | 7.36e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.