FFCP PHASE1:Mm9::chrM:5722..5731,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=415|UniProt=|association_with_transcript=395bp_to_uc009vey.1_5end|description=CAGE_peak_6_at_uc009vey.1_5end|id=chrM:5722..5731,+|ontology_enrichment_celltype=CL:0000063!7.09e-22!66;CL:0002031!1.44e-13!25;CL:0000988!1.43e-12!32;CL:0002032!1.43e-12!32;CL:0000037!1.43e-12!32;CL:0000566!1.43e-12!32;CL:0000837!1.43e-12!32;CL:0000144!2.02e-11!121;CL:0000012!2.02e-11!121;CL:0000066!1.24e-10!25;CL:0002320!2.89e-10!46;CL:0000134!2.89e-10!46;CL:0000548!3.79e-10!115;CL:0000004!3.79e-10!115;CL:0000255!3.79e-10!115;CL:0002371!4.27e-10!118;CL:0002076!7.60e-10!15;CL:0000838!1.38e-09!12;CL:0000219!3.41e-09!54;CL:0000791!7.08e-09!9;CL:0000789!7.08e-09!9;CL:0002420!7.08e-09!9;CL:0002419!7.08e-09!9;CL:0000790!7.08e-09!9;CL:0000738!7.69e-09!17;CL:0002087!7.69e-09!17;CL:0000084!1.29e-08!11;CL:0000827!1.29e-08!11;CL:0000542!1.44e-08!13;CL:0000051!1.44e-08!13;CL:0002563!3.30e-08!9;CL:0002251!3.30e-08!9;CL:0000624!7.09e-08!8;CL:0000223!1.36e-07!20;CL:0000075!9.11e-07!7|ontology_enrichment_celltype_v019_2=CL:0002031,1.75e-22,25;CL:0000988,2.05e-20,32;CL:0002032,2.05e-20,32;CL:0000037,2.05e-20,32;CL:0000837,2.05e-20,32;CL:0002320,1.88e-19,46;CL:0000134,1.88e-19,46;CL:0000219,7.03e-19,54;CL:0000738,3.45e-15,17;CL:0002087,3.45e-15,17;CL:0000838,5.50e-15,12;CL:0000542,1.14e-13,13;CL:0000051,1.14e-13,13;CL:0000084,3.82e-13,11;CL:0000827,3.82e-13,11;CL:0000791,7.25e-13,9;CL:0000789,7.25e-13,9;CL:0002420,7.25e-13,9;CL:0002419,7.25e-13,9;CL:0000790,7.25e-13,9;CL:0002076,1.19e-11,15;CL:0000624,5.57e-11,8;CL:0000034,1.45e-10,97;CL:0000066,1.61e-10,25;CL:0000223,5.40e-10,20;CL:0000839,3.77e-09,13;CL:0000763,8.19e-09,16;CL:0000049,1.11e-08,19;CL:0000723,1.58e-08,91;CL:0000048,1.58e-08,91;CL:0000553,3.34e-08,6;CL:0000556,3.34e-08,6;CL:0000893,7.36e-08,6;CL:0002489,7.36e-08,6;CL:0000898,7.36e-08,6;CL:0000809,7.36e-08,6;CL:0000810,7.36e-08,6;CL:0000895,7.36e-08,6;CL:0000808,7.36e-08,6;CL:0000894,7.36e-08,6;CL:0000806,7.36e-08,6;CL:0000807,7.36e-08,6;CL:0000805,7.36e-08,6;CL:0002425,7.36e-08,6;CL:0002436,7.36e-08,6;CL:0002427,7.36e-08,6;CL:0002428,7.36e-08,6;CL:0002429,7.36e-08,6;CL:0002433,7.36e-08,6;CL:0002431,7.36e-08,6;CL:0002432,7.36e-08,6;CL:0000068,1.35e-07,3;CL:0002202,1.35e-07,3;CL:0000069,1.35e-07,3;CL:0002632,1.35e-07,3;CL:0002368,1.35e-07,3;CL:0000307,1.35e-07,3;CL:0000377,1.35e-07,3;CL:0000050,1.85e-07,9;CL:0000349,2.42e-07,3;CL:0000351,2.42e-07,3;CL:0002563,4.02e-07,9;CL:0002251,4.02e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.89e-10!46;UBERON:0000344!1.79e-09!15;UBERON:0000485!2.67e-09!11;UBERON:0003350!3.30e-08!9;UBERON:0004808!3.30e-08!9;UBERON:0001277!3.30e-08!9;UBERON:0001242!1.02e-07!13;UBERON:0000060!1.02e-07!13;UBERON:0001262!1.02e-07!13;UBERON:0004786!1.02e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-19,46;UBERON:0000344,2.87e-09,15;UBERON:0003126,1.35e-07,3;UBERON:0001005,1.35e-07,3;UBERON:0007196,1.35e-07,3;UBERON:0001558,1.35e-07,3;UBERON:0000358,2.42e-07,3;UBERON:0000307,2.42e-07,3;UBERON:0007010,2.42e-07,3;UBERON:0003350,4.02e-07,9;UBERON:0004808,4.02e-07,9;UBERON:0001277,4.02e-07,9;UBERON:0002193,5.20e-07,48;UBERON:0002405,5.20e-07,48;UBERON:0002371,5.61e-07,16|phase1_expression=0.480446541314382,1.04692622291808,0.909998478779072,21.1724947914781,7.01254021924886,0.671517087647559,2.33612640595526,1.42035655785734,2.67498572088167,3.97909694747389,2.39705155515707,0.8774937489487,3.42401459862411,3.05971408466491,0,4.25198061518635,4.19737126876888,3.94327706697797,4.52477630898938,2.54633791078818,0,0,5.48519557191764,6.07971206614945,5.04700418347774,1.14846392823004,0.86152399231815,2.37018355954478,8.17100703662408,0.504060259519861,0,3.81018404075779,0.61506478758457,0,0.577703239502549,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,7.88578248471361,5.80289713609076,8.06625117941913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,4.53429360640713,3.18850937571846,24.9522924324602,0,0,0,0,0.140444420131752,0,2.07828803682295,3.18005617059306,0.563373679106722,2.56652954828636,0,0,12.5564803786504,9.62767488805375,7.07734223020697,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.599075622529601,0,1.14363204365758,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0.350296027101508,0.329119699826961,0,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,34.6819953060326,29.914812610029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0.967399816630967,1.90934123603023,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,6.21560669447381,6.45939767588225,8.39423081820392,0,0,0,0,0,0,0,0,17.3571714167124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0.231867835620421|short_description=p6@uc009vey.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=415 | |||
|UniProt= | |||
|association_with_transcript=395bp_to_uc009vey.1_5end | |||
|description=CAGE_peak_6_at_uc009vey.1_5end | |||
|id=chrM:5722..5731,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.09e-22!66;CL:0002031!1.44e-13!25;CL:0000988!1.43e-12!32;CL:0002032!1.43e-12!32;CL:0000037!1.43e-12!32;CL:0000566!1.43e-12!32;CL:0000837!1.43e-12!32;CL:0000144!2.02e-11!121;CL:0000012!2.02e-11!121;CL:0000066!1.24e-10!25;CL:0002320!2.89e-10!46;CL:0000134!2.89e-10!46;CL:0000548!3.79e-10!115;CL:0000004!3.79e-10!115;CL:0000255!3.79e-10!115;CL:0002371!4.27e-10!118;CL:0002076!7.60e-10!15;CL:0000838!1.38e-09!12;CL:0000219!3.41e-09!54;CL:0000791!7.08e-09!9;CL:0000789!7.08e-09!9;CL:0002420!7.08e-09!9;CL:0002419!7.08e-09!9;CL:0000790!7.08e-09!9;CL:0000738!7.69e-09!17;CL:0002087!7.69e-09!17;CL:0000084!1.29e-08!11;CL:0000827!1.29e-08!11;CL:0000542!1.44e-08!13;CL:0000051!1.44e-08!13;CL:0002563!3.30e-08!9;CL:0002251!3.30e-08!9;CL:0000624!7.09e-08!8;CL:0000223!1.36e-07!20;CL:0000075!9.11e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.75e-22,25;CL:0000988,2.05e-20,32;CL:0002032,2.05e-20,32;CL:0000037,2.05e-20,32;CL:0000837,2.05e-20,32;CL:0002320,1.88e-19,46;CL:0000134,1.88e-19,46;CL:0000219,7.03e-19,54;CL:0000738,3.45e-15,17;CL:0002087,3.45e-15,17;CL:0000838,5.50e-15,12;CL:0000542,1.14e-13,13;CL:0000051,1.14e-13,13;CL:0000084,3.82e-13,11;CL:0000827,3.82e-13,11;CL:0000791,7.25e-13,9;CL:0000789,7.25e-13,9;CL:0002420,7.25e-13,9;CL:0002419,7.25e-13,9;CL:0000790,7.25e-13,9;CL:0002076,1.19e-11,15;CL:0000624,5.57e-11,8;CL:0000034,1.45e-10,97;CL:0000066,1.61e-10,25;CL:0000223,5.40e-10,20;CL:0000839,3.77e-09,13;CL:0000763,8.19e-09,16;CL:0000049,1.11e-08,19;CL:0000723,1.58e-08,91;CL:0000048,1.58e-08,91;CL:0000553,3.34e-08,6;CL:0000556,3.34e-08,6;CL:0000893,7.36e-08,6;CL:0002489,7.36e-08,6;CL:0000898,7.36e-08,6;CL:0000809,7.36e-08,6;CL:0000810,7.36e-08,6;CL:0000895,7.36e-08,6;CL:0000808,7.36e-08,6;CL:0000894,7.36e-08,6;CL:0000806,7.36e-08,6;CL:0000807,7.36e-08,6;CL:0000805,7.36e-08,6;CL:0002425,7.36e-08,6;CL:0002436,7.36e-08,6;CL:0002427,7.36e-08,6;CL:0002428,7.36e-08,6;CL:0002429,7.36e-08,6;CL:0002433,7.36e-08,6;CL:0002431,7.36e-08,6;CL:0002432,7.36e-08,6;CL:0000068,1.35e-07,3;CL:0002202,1.35e-07,3;CL:0000069,1.35e-07,3;CL:0002632,1.35e-07,3;CL:0002368,1.35e-07,3;CL:0000307,1.35e-07,3;CL:0000377,1.35e-07,3;CL:0000050,1.85e-07,9;CL:0000349,2.42e-07,3;CL:0000351,2.42e-07,3;CL:0002563,4.02e-07,9;CL:0002251,4.02e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.89e-10!46;UBERON:0000344!1.79e-09!15;UBERON:0000485!2.67e-09!11;UBERON:0003350!3.30e-08!9;UBERON:0004808!3.30e-08!9;UBERON:0001277!3.30e-08!9;UBERON:0001242!1.02e-07!13;UBERON:0000060!1.02e-07!13;UBERON:0001262!1.02e-07!13;UBERON:0004786!1.02e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.88e-19,46;UBERON:0000344,2.87e-09,15;UBERON:0003126,1.35e-07,3;UBERON:0001005,1.35e-07,3;UBERON:0007196,1.35e-07,3;UBERON:0001558,1.35e-07,3;UBERON:0000358,2.42e-07,3;UBERON:0000307,2.42e-07,3;UBERON:0007010,2.42e-07,3;UBERON:0003350,4.02e-07,9;UBERON:0004808,4.02e-07,9;UBERON:0001277,4.02e-07,9;UBERON:0002193,5.20e-07,48;UBERON:0002405,5.20e-07,48;UBERON:0002371,5.61e-07,16 | |||
|phase1_expression=0.480446541314382,1.04692622291808,0.909998478779072,21.1724947914781,7.01254021924886,0.671517087647559,2.33612640595526,1.42035655785734,2.67498572088167,3.97909694747389,2.39705155515707,0.8774937489487,3.42401459862411,3.05971408466491,0,4.25198061518635,4.19737126876888,3.94327706697797,4.52477630898938,2.54633791078818,0,0,5.48519557191764,6.07971206614945,5.04700418347774,1.14846392823004,0.86152399231815,2.37018355954478,8.17100703662408,0.504060259519861,0,3.81018404075779,0.61506478758457,0,0.577703239502549,1.99481574430191,1.22501613757421,0.418531630736908,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0,0,0,0,7.88578248471361,5.80289713609076,8.06625117941913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36307147999731,4.53429360640713,3.18850937571846,24.9522924324602,0,0,0,0,0.140444420131752,0,2.07828803682295,3.18005617059306,0.563373679106722,2.56652954828636,0,0,12.5564803786504,9.62767488805375,7.07734223020697,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.599075622529601,0,1.14363204365758,0,0.457500602818626,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,1.02939162845886,0,0,0,0,0.23674473558521,0,0,0,0,0.350296027101508,0.329119699826961,0,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.163863314715738,0,0,34.6819953060326,29.914812610029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.509935289981566,0.419854356970974,0.967399816630967,1.90934123603023,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,6.21560669447381,6.45939767588225,8.39423081820392,0,0,0,0,0,0,0,0,17.3571714167124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@uc009vey.1 | |||
}} |
Revision as of 19:08, 14 September 2013
Short description: | p6@uc009vey.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_uc009vey.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:415 |
Association with transcript: | 395bp_to_uc009vey.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.88e-19 | 46 |
mucosa | 2.87e-09 | 15 |
trachea | 1.35e-07 | 3 |
respiratory airway | 1.35e-07 | 3 |
tracheobronchial tree | 1.35e-07 | 3 |
lower respiratory tract | 1.35e-07 | 3 |
blastocyst | 2.42e-07 | 3 |
blastula | 2.42e-07 | 3 |
cleaving embryo | 2.42e-07 | 3 |
epithelium of mucosa | 4.02e-07 | 9 |
gastrointestinal system epithelium | 4.02e-07 | 9 |
intestinal epithelium | 4.02e-07 | 9 |
hemolymphoid system | 5.20e-07 | 48 |
immune system | 5.20e-07 | 48 |
bone marrow | 5.61e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.