FFCP PHASE1:Mm9::chr4:131864583..131864603,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100039864|HGNC=|MCL_coexpression_id=155|UniProt=|association_with_transcript=0bp_to_ENSMUST00000137343,ENSMUST00000144705,NR_029468,uc008vaz.1,uc012dme.1_5end|description=CAGE_peak_1_at_Snhg12_5end|id=chr4:131864583..131864603,+|ontology_enrichment_celltype=CL:0000034!5.10e-22!97;CL:0000548!6.75e-21!115;CL:0000004!6.75e-21!115;CL:0000255!6.75e-21!115;CL:0000723!1.01e-20!91;CL:0000048!1.01e-20!91;CL:0000144!2.09e-20!121;CL:0000012!2.09e-20!121;CL:0002371!1.42e-18!118;CL:0000063!4.53e-14!66;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0002320!4.83e-13!46;CL:0000134!4.83e-13!46;CL:0000219!8.89e-11!54;CL:0002031!6.15e-10!25;CL:0000393!2.66e-08!39;CL:0000211!2.66e-08!39;CL:0000540!7.44e-08!33;CL:0000047!7.44e-08!33;CL:0000031!7.44e-08!33;CL:0000404!7.44e-08!33;CL:0000049!1.03e-07!19;CL:0000542!1.49e-07!13;CL:0000051!1.49e-07!13;CL:0000838!2.78e-07!12;CL:0000791!4.52e-07!9;CL:0000789!4.52e-07!9;CL:0002420!4.52e-07!9;CL:0002419!4.52e-07!9;CL:0000790!4.52e-07!9|ontology_enrichment_celltype_v019_2=CL:0000034,5.10e-22,97;CL:0000723,1.01e-20,91;CL:0000048,1.01e-20,91;CL:0000988,5.55e-14,32;CL:0002032,5.55e-14,32;CL:0000037,5.55e-14,32;CL:0000837,5.55e-14,32;CL:0002320,4.83e-13,46;CL:0000134,4.83e-13,46;CL:0000219,8.89e-11,54;CL:0002031,6.15e-10,25;CL:0000393,2.66e-08,39;CL:0000211,2.66e-08,39;CL:0000540,7.44e-08,33;CL:0000047,7.44e-08,33;CL:0000031,7.44e-08,33;CL:0000404,7.44e-08,33;CL:0000049,1.03e-07,19;CL:0000542,1.49e-07,13;CL:0000051,1.49e-07,13;CL:0000838,2.78e-07,12;CL:0000791,4.52e-07,9;CL:0000789,4.52e-07,9;CL:0002420,4.52e-07,9;CL:0002419,4.52e-07,9;CL:0000790,4.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.83e-13!46;UBERON:0002390!5.22e-09!45;UBERON:0003061!5.22e-09!45;UBERON:0002193!1.13e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.83e-13,46;UBERON:0002390,5.22e-09,45;UBERON:0003061,5.22e-09,45;UBERON:0002193,1.13e-07,48;UBERON:0002405,1.13e-07,48|phase1_expression=66.4617715484895,40.1321718785265,28.6649520815408,17.845388467103,31.0555352566735,70.1735356591699,76.8585587559279,100.587068960988,223.994856943302,217.680009479454,264.189324971954,233.65265369734,115.218091243701,108.663560206814,66.2888426013169,72.081195190778,61.5614452752769,91.4840279538889,80.4861725265687,98.034009565345,27.2138528483423,39.1206347731488,58.7699525562605,30.0785754851605,31.6584807872695,47.0870210574317,51.691439539089,54.9451643349017,25.4631382071541,37.8045194639896,47.2285987695799,209.560122241678,262.017599511027,285.26702582779,96.1875893771744,68.8211431784158,106.372234612694,15.9042019680025,21.8773896466664,7.85285615960697,14.7057872007754,12.294818729252,12.62326917881,53.002560367718,49.6746962975621,34.3232426542344,74.3271777130637,28.343270329458,28.1198313900124,35.5806715305939,41.5759672227327,34.5006154475932,117.280041634358,151.600687680371,153.930960007249,45.7921796143986,60.7450892670164,54.1455696891314,55.4347102755298,76.7036919944448,58.3124891225685,57.9424149838216,40.0182658250013,52.6441334609618,54.3876499411836,53.9964887359036,44.6404164672423,36.1165207002261,51.9484957665473,72.7682007607813,52.7915652991969,45.9898084890124,55.2171352379034,54.3859148514396,52.9067000020665,64.3453150627015,49.5521464497249,42.5198835823675,47.0035991764105,50.2486756252039,60.4733324211928,43.7567231267678,45.7860118362265,74.2846645241817,58.6745271462951,54.8009168981022,47.5521413869004,57.9702276516685,68.6079311598647,24.1828992341714,144.062650884734,23.2314446784974,121.03489739998,29.1439723484421,14.9448576012964,28.2256938871321,19.9431076587088,49.7656541927929,74.8183693256262,65.3678212844129,35.3516983639468,60.3134443847294,61.153257529595,42.6640021891999,50.0094304735905,43.0711771307668,41.4530044912122,23.8644308612835,33.9208627577795,25.5320479191499,35.5644919870578,44.7564253118848,29.0575526542634,38.735718622024,33.1600154122688,11.5613264023301,41.5287545793748,18.7979163995885,37.1536431818947,26.0444628415329,27.6051898075492,32.0017667069247,7.45567044872489,34.8409148443741,24.2958179903608,23.5020490791904,168.100619681806,261.557590713126,181.075073579117,46.8844701337095,43.0050566649509,69.7381654226398,37.8937018019163,37.0787413128979,50.4924948279731,49.1591027095306,42.5688540894322,33.465475094115,51.302719962036,54.9253243863697,46.7132390236106,59.774547152703,47.1762780090015,54.4044392386931,51.6397028558578,48.9394411488126,39.1673208659667,70.6260202117513,28.0238390812695,38.1994281938995,43.9877810409872,61.1556093472934,56.4435915927964,41.0937556496157,50.2108412835382,55.1324919087226,179.064362764875,166.246747996106,106.277148773952,27.5477277472218,34.4753308172211,31.8709848785996,30.7768156260773,29.9081632256054,33.4759634965611,29.7643449280522,24.9494263301646,30.9428157272999,16.785104691175,24.6251196118643,17.5108628619048,17.9825984533159,14.9294078397914,16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| ||
|EntrezGene=100039864 | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000137343,ENSMUST00000144705,NR_029468,uc008vaz.1,uc012dme.1_5end | |||
|description=CAGE_peak_1_at_Snhg12_5end | |||
|id=chr4:131864583..131864603,+ | |||
|ontology_enrichment_celltype=CL:0000034!5.10e-22!97;CL:0000548!6.75e-21!115;CL:0000004!6.75e-21!115;CL:0000255!6.75e-21!115;CL:0000723!1.01e-20!91;CL:0000048!1.01e-20!91;CL:0000144!2.09e-20!121;CL:0000012!2.09e-20!121;CL:0002371!1.42e-18!118;CL:0000063!4.53e-14!66;CL:0000988!5.55e-14!32;CL:0002032!5.55e-14!32;CL:0000037!5.55e-14!32;CL:0000566!5.55e-14!32;CL:0000837!5.55e-14!32;CL:0002320!4.83e-13!46;CL:0000134!4.83e-13!46;CL:0000219!8.89e-11!54;CL:0002031!6.15e-10!25;CL:0000393!2.66e-08!39;CL:0000211!2.66e-08!39;CL:0000540!7.44e-08!33;CL:0000047!7.44e-08!33;CL:0000031!7.44e-08!33;CL:0000404!7.44e-08!33;CL:0000049!1.03e-07!19;CL:0000542!1.49e-07!13;CL:0000051!1.49e-07!13;CL:0000838!2.78e-07!12;CL:0000791!4.52e-07!9;CL:0000789!4.52e-07!9;CL:0002420!4.52e-07!9;CL:0002419!4.52e-07!9;CL:0000790!4.52e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,5.10e-22,97;CL:0000723,1.01e-20,91;CL:0000048,1.01e-20,91;CL:0000988,5.55e-14,32;CL:0002032,5.55e-14,32;CL:0000037,5.55e-14,32;CL:0000837,5.55e-14,32;CL:0002320,4.83e-13,46;CL:0000134,4.83e-13,46;CL:0000219,8.89e-11,54;CL:0002031,6.15e-10,25;CL:0000393,2.66e-08,39;CL:0000211,2.66e-08,39;CL:0000540,7.44e-08,33;CL:0000047,7.44e-08,33;CL:0000031,7.44e-08,33;CL:0000404,7.44e-08,33;CL:0000049,1.03e-07,19;CL:0000542,1.49e-07,13;CL:0000051,1.49e-07,13;CL:0000838,2.78e-07,12;CL:0000791,4.52e-07,9;CL:0000789,4.52e-07,9;CL:0002420,4.52e-07,9;CL:0002419,4.52e-07,9;CL:0000790,4.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.83e-13!46;UBERON:0002390!5.22e-09!45;UBERON:0003061!5.22e-09!45;UBERON:0002193!1.13e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.83e-13,46;UBERON:0002390,5.22e-09,45;UBERON:0003061,5.22e-09,45;UBERON:0002193,1.13e-07,48;UBERON:0002405,1.13e-07,48 | |||
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| |||
|short_description=p1@Snhg12 | |||
}} |
Revision as of 03:58, 14 September 2013
Short description: | p1@Snhg12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snhg12_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000137343, ENSMUST00000144705, NR_029468, uc008vaz.1, uc012dme.1_5end |
EntrezGene: | Snhg12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 5.10e-22 | 97 |
somatic stem cell | 1.01e-20 | 91 |
multi fate stem cell | 1.01e-20 | 91 |
hematopoietic cell | 5.55e-14 | 32 |
hematopoietic oligopotent progenitor cell | 5.55e-14 | 32 |
hematopoietic stem cell | 5.55e-14 | 32 |
hematopoietic multipotent progenitor cell | 5.55e-14 | 32 |
connective tissue cell | 4.83e-13 | 46 |
mesenchymal cell | 4.83e-13 | 46 |
motile cell | 8.89e-11 | 54 |
hematopoietic lineage restricted progenitor cell | 6.15e-10 | 25 |
electrically responsive cell | 2.66e-08 | 39 |
electrically active cell | 2.66e-08 | 39 |
neuron | 7.44e-08 | 33 |
neuronal stem cell | 7.44e-08 | 33 |
neuroblast | 7.44e-08 | 33 |
electrically signaling cell | 7.44e-08 | 33 |
common myeloid progenitor | 1.03e-07 | 19 |
lymphocyte | 1.49e-07 | 13 |
common lymphoid progenitor | 1.49e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.78e-07 | 12 |
mature alpha-beta T cell | 4.52e-07 | 9 |
alpha-beta T cell | 4.52e-07 | 9 |
immature T cell | 4.52e-07 | 9 |
mature T cell | 4.52e-07 | 9 |
immature alpha-beta T cell | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.83e-13 | 46 |
hematopoietic system | 5.22e-09 | 45 |
blood island | 5.22e-09 | 45 |
hemolymphoid system | 1.13e-07 | 48 |
immune system | 1.13e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.