FFCP PHASE1:Mm9::chr12:117724187..117724257,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19276|HGNC=|MCL_coexpression_id=414|UniProt=P80560,Q8C8Z6,A3KN68,Q3UU93|association_with_transcript=0bp_to_ENSMUST00000070733,ENSMUST00000084823,NM_011215,uc007phv.2,uc007phw.2,uc007phx.2,uc011yvq.1_5end|description=CAGE_peak_1_at_Ptprn2_5end|id=chr12:117724187..117724257,+|ontology_enrichment_celltype=CL:0000540!2.50e-11!33;CL:0000047!2.50e-11!33;CL:0000031!2.50e-11!33;CL:0000404!2.50e-11!33;CL:0000117!5.23e-11!23;CL:0000337!5.23e-11!23;CL:0002319!2.44e-09!43;CL:0000221!3.12e-09!44;CL:0000133!3.12e-09!44;CL:0000393!3.87e-07!39;CL:0000211!3.87e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.80e-12,33;CL:0000047,3.80e-12,33;CL:0000031,3.80e-12,33;CL:0000404,3.80e-12,33;CL:0000117,8.44e-12,23;CL:0000337,8.44e-12,23;CL:0002319,3.91e-10,43;CL:0000221,5.13e-10,44;CL:0000133,5.13e-10,44;CL:0000393,4.09e-08,39;CL:0000211,4.09e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.77e-26!73;UBERON:0005743!6.77e-26!73;UBERON:0000073!1.86e-25!75;UBERON:0001016!1.86e-25!75;UBERON:0002346!7.51e-24!71;UBERON:0003075!7.51e-24!71;UBERON:0007284!7.51e-24!71;UBERON:0001049!7.49e-23!52;UBERON:0005068!7.49e-23!52;UBERON:0006241!7.49e-23!52;UBERON:0007135!7.49e-23!52;UBERON:0000955!3.90e-22!50;UBERON:0006238!3.90e-22!50;UBERON:0004121!8.91e-22!102;UBERON:0000924!8.91e-22!102;UBERON:0006601!8.91e-22!102;UBERON:0002616!1.44e-21!49;UBERON:0000033!2.97e-21!63;UBERON:0003080!4.35e-18!40;UBERON:0003056!8.72e-18!49;UBERON:0002780!1.60e-17!39;UBERON:0001890!1.60e-17!39;UBERON:0006240!1.60e-17!39;UBERON:0002020!3.68e-17!34;UBERON:0002791!1.30e-14!29;UBERON:0003528!1.30e-14!29;UBERON:0001893!1.30e-14!29;UBERON:0000956!9.15e-11!21;UBERON:0001869!9.15e-11!21;UBERON:0000203!9.15e-11!21;UBERON:0005409!9.36e-11!59;UBERON:0000160!1.74e-10!43;UBERON:0002619!1.53e-09!17;UBERON:0007811!7.38e-09!86;UBERON:0002108!2.58e-08!16;UBERON:0002021!3.28e-08!10;UBERON:0000411!3.28e-08!10;UBERON:0001950!3.28e-08!10;UBERON:0001045!4.11e-08!13;UBERON:0001264!8.22e-08!12;UBERON:0003922!8.22e-08!12;UBERON:0002114!8.22e-08!12;UBERON:0003923!8.22e-08!12;UBERON:0003924!8.22e-08!12;UBERON:0003921!8.22e-08!12;UBERON:0000468!4.83e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.82e-28,73;UBERON:0001016,1.15e-27,75;UBERON:0000073,2.97e-26,54;UBERON:0002346,1.11e-24,64;UBERON:0003075,1.11e-24,64;UBERON:0007284,1.11e-24,64;UBERON:0001049,1.22e-24,52;UBERON:0005068,1.22e-24,52;UBERON:0006241,1.22e-24,52;UBERON:0007135,1.22e-24,52;UBERON:0004121,8.72e-22,95;UBERON:0000924,8.72e-22,95;UBERON:0006601,8.72e-22,95;UBERON:0000955,1.02e-21,47;UBERON:0006238,1.02e-21,47;UBERON:0002616,4.07e-21,46;UBERON:0003080,1.78e-19,40;UBERON:0010371,5.28e-19,73;UBERON:0002780,7.31e-19,39;UBERON:0001890,7.31e-19,39;UBERON:0006240,7.31e-19,39;UBERON:0003056,1.00e-18,49;UBERON:0002020,1.81e-18,34;UBERON:0003528,1.05e-15,29;UBERON:0002791,1.05e-15,29;UBERON:0001893,1.05e-15,29;UBERON:0010314,8.72e-14,92;UBERON:0000956,1.55e-11,21;UBERON:0001869,1.55e-11,21;UBERON:0000203,1.55e-11,21;UBERON:0002619,3.27e-10,17;UBERON:0002021,9.05e-09,10;UBERON:0000411,9.05e-09,10;UBERON:0001950,9.05e-09,10;UBERON:0001264,2.45e-08,12;UBERON:0011216,4.99e-08,194|phase1_expression=4.00372117761985,1.74487703819681,2.27499619694768,2.41971369045464,2.00358291978539,50.3637815735669,57.0014843053083,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8472294801258,0,0,13.2793710918528,11.6998733344257,4.59385571292016,9.90752591165872,14.0056301245828,27.5533958211742,18.146169342715,12.6386391073524,0,0,0,1.73310971850765,4.65457007003779,2.85837098767317,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,4.14247797122848,7.90870257844099,12.8323733389027,1.53985063787899,0,0,0,0,0,0,0,69.1922296139824,61.8919445748278,75.4259370172353,0,0,0,0,0,1.19840044207362,3.45796474789399,21.048991298621,21.8709620097339,23.135745748652,111.11823293308,102.7038715425,29.275301012374,23.0029130443767,44.122501757281,215.827126758802,226.006588410782,188.321609772154,67.2620067423989,47.3905993860482,57.8213841318004,163.042871416806,176.707459549947,166.397291828946,122.270862971572,106.494017237729,91.3357284543973,1.8931548333296,2.26714680320357,0.289864488701678,0,0,0.539703191637817,0,0,10.1119982494861,0,0,0,2.67602497575693,0,0,0,0,0,0,10.5049169341535,0,29.688427812965,6.24547176358089,11.2652226975492,7.37969591219387,9.79697163592047,14.8161770990988,12.4409925416379,0,0.433798070759735,0,0,0,0,39.1422698558057,90.7620470735796,92.3659977047337,29.6330184041966,0,0,0,155.033311783992,174.307729673897,51.015666957823,235.531953860535,245.742554494448,172.671865028994,190.471242841547,0,0,0,9.6803253707778,0.520481771850815,3.90833577536904,5.04173963454978,6.78171680260718,13.6753363294169,14.3487366719032,15.9292931751539,26.9051505568576,0,0.189106080167819,0,0,0.278047249225598,0,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.402619256281115,194.728492370382,57.1120598705029,26.10308385572,13.2225283331772,1.06644125267617,2.55460339046482,10.5671318284117,16.7397325437374,10.6741461045538,21.6857213768317,18.506633400236,15.481701744057,23.8768448360256,23.8747766449381,24.5654749770091,29.6610404855893,20.7492527879706,22.1046813312348,0.189667900953082,2.62771579002376,0,0.610953983535943,0.193952487167626,1.05203729835478,0.252946148497029,0.295220295959204,0.784993639206874,0.493588655687202,0.592905254174298,0,0.196558995113203,0.224862112384854,0,0,1.01850340712568,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,1.47802552133284,0.568474235311454,0.162964976442026,0.848725428875941,0.469380496577004,1.00503754465089,0,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,116.720278921125,119.907555383824,0,0.252470927204373,13.2513452154828,12.1036010731958,29.7284288871263,4.77937595905104,6.46116154838943,9.90767857760913,10.9298889452221,28.3488182173973,24.903130010631,117.603601810381,0,0.35613120733451,0.81443479676788,0,234.958894861734,46.1283208694465,63.7902705195625,129.948899951814,213.79857044568,163.555498706169,94.8431835927372,181.403331009275,158.284836002816,159.598562757587,264.600707523247,245.462592930685,326.481581917883,3.24109969256358,2.71653235943784,10.2881776815164,25.1823131772028,63.4992990663371,88.6919221045432,106.258267240995,0,0.63549621259146,21.6117830093863,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,20.4036585640896,100.129663085675,0,4.74689796315412,1.66675074632741,0.188368457004691,0.136694227721025,0,0,0,0,82.1016731492998,1.26534397432454,18.2987520414164,19.6569720295678,28.0178316659388,39.7419866018043,43.6960482286819,46.3685886619135,89.5205321585381,14.9057219285562,1.86401793926078,2.25477175473676,0,0.165458490457098,0,0.387479470433193,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0.483168241652012,0,0.316011120628178,0.810900861160657,0.102710957164827,0,0.358053391334963,0,0,0.295379054349154,0,0,0,0.682205165178267,0.384847366561318,0.233753804363138,7.02864189207155,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,3.42989406526505,2.00628841614145,263.73911050217,263.766360518612,296.186980448168,283.901457231772,271.977760348945,253.05695562555,249.083302585536,236.418631692716,238.352907125692,253.702552758392,1.03787347584177,8.77854721482268,11.0976843740187,8.99494853152688,6.70762120409543,6.43452279575049,12.8903102124937,10.9198580336614,15.0832028508153,10.8659801058433,13.1809235942925,12.6379648728671,12.735245015904,14.0855335290712,12.17631941859,10.0021675169445,13.3266974836584,10.0312794641127,14.4230065281157,13.1007038919614,10.9718160763333,12.0683548188349,10.7296285476294,14.3892952466005,12.516547595239,12.6921911837515,13.1708140468396,14.2057644176435,14.5310401815072,11.2228454331548,13.8802971205284,14.5786633915834,14.7323175541088,13.789378865551,12.1531164918119,28.9780270408017,11.462648813825,10.7435527024149,5.35607329792761,2.8676884485537,3.2461496986859|short_description=p1@Ptprn2}} | ||
|EntrezGene=19276 | |||
|HGNC= | |||
|MCL_coexpression_id=414 | |||
|UniProt=P80560,Q8C8Z6,A3KN68,Q3UU93 | |||
|association_with_transcript=0bp_to_ENSMUST00000070733,ENSMUST00000084823,NM_011215,uc007phv.2,uc007phw.2,uc007phx.2,uc011yvq.1_5end | |||
|description=CAGE_peak_1_at_Ptprn2_5end | |||
|id=chr12:117724187..117724257,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.50e-11!33;CL:0000047!2.50e-11!33;CL:0000031!2.50e-11!33;CL:0000404!2.50e-11!33;CL:0000117!5.23e-11!23;CL:0000337!5.23e-11!23;CL:0002319!2.44e-09!43;CL:0000221!3.12e-09!44;CL:0000133!3.12e-09!44;CL:0000393!3.87e-07!39;CL:0000211!3.87e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.80e-12,33;CL:0000047,3.80e-12,33;CL:0000031,3.80e-12,33;CL:0000404,3.80e-12,33;CL:0000117,8.44e-12,23;CL:0000337,8.44e-12,23;CL:0002319,3.91e-10,43;CL:0000221,5.13e-10,44;CL:0000133,5.13e-10,44;CL:0000393,4.09e-08,39;CL:0000211,4.09e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.77e-26!73;UBERON:0005743!6.77e-26!73;UBERON:0000073!1.86e-25!75;UBERON:0001016!1.86e-25!75;UBERON:0002346!7.51e-24!71;UBERON:0003075!7.51e-24!71;UBERON:0007284!7.51e-24!71;UBERON:0001049!7.49e-23!52;UBERON:0005068!7.49e-23!52;UBERON:0006241!7.49e-23!52;UBERON:0007135!7.49e-23!52;UBERON:0000955!3.90e-22!50;UBERON:0006238!3.90e-22!50;UBERON:0004121!8.91e-22!102;UBERON:0000924!8.91e-22!102;UBERON:0006601!8.91e-22!102;UBERON:0002616!1.44e-21!49;UBERON:0000033!2.97e-21!63;UBERON:0003080!4.35e-18!40;UBERON:0003056!8.72e-18!49;UBERON:0002780!1.60e-17!39;UBERON:0001890!1.60e-17!39;UBERON:0006240!1.60e-17!39;UBERON:0002020!3.68e-17!34;UBERON:0002791!1.30e-14!29;UBERON:0003528!1.30e-14!29;UBERON:0001893!1.30e-14!29;UBERON:0000956!9.15e-11!21;UBERON:0001869!9.15e-11!21;UBERON:0000203!9.15e-11!21;UBERON:0005409!9.36e-11!59;UBERON:0000160!1.74e-10!43;UBERON:0002619!1.53e-09!17;UBERON:0007811!7.38e-09!86;UBERON:0002108!2.58e-08!16;UBERON:0002021!3.28e-08!10;UBERON:0000411!3.28e-08!10;UBERON:0001950!3.28e-08!10;UBERON:0001045!4.11e-08!13;UBERON:0001264!8.22e-08!12;UBERON:0003922!8.22e-08!12;UBERON:0002114!8.22e-08!12;UBERON:0003923!8.22e-08!12;UBERON:0003924!8.22e-08!12;UBERON:0003921!8.22e-08!12;UBERON:0000468!4.83e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.82e-28,73;UBERON:0001016,1.15e-27,75;UBERON:0000073,2.97e-26,54;UBERON:0002346,1.11e-24,64;UBERON:0003075,1.11e-24,64;UBERON:0007284,1.11e-24,64;UBERON:0001049,1.22e-24,52;UBERON:0005068,1.22e-24,52;UBERON:0006241,1.22e-24,52;UBERON:0007135,1.22e-24,52;UBERON:0004121,8.72e-22,95;UBERON:0000924,8.72e-22,95;UBERON:0006601,8.72e-22,95;UBERON:0000955,1.02e-21,47;UBERON:0006238,1.02e-21,47;UBERON:0002616,4.07e-21,46;UBERON:0003080,1.78e-19,40;UBERON:0010371,5.28e-19,73;UBERON:0002780,7.31e-19,39;UBERON:0001890,7.31e-19,39;UBERON:0006240,7.31e-19,39;UBERON:0003056,1.00e-18,49;UBERON:0002020,1.81e-18,34;UBERON:0003528,1.05e-15,29;UBERON:0002791,1.05e-15,29;UBERON:0001893,1.05e-15,29;UBERON:0010314,8.72e-14,92;UBERON:0000956,1.55e-11,21;UBERON:0001869,1.55e-11,21;UBERON:0000203,1.55e-11,21;UBERON:0002619,3.27e-10,17;UBERON:0002021,9.05e-09,10;UBERON:0000411,9.05e-09,10;UBERON:0001950,9.05e-09,10;UBERON:0001264,2.45e-08,12;UBERON:0011216,4.99e-08,194 | |||
|phase1_expression=4.00372117761985,1.74487703819681,2.27499619694768,2.41971369045464,2.00358291978539,50.3637815735669,57.0014843053083,0,0,0,0,0,0,0,0,0,0,0,0,0,33.8472294801258,0,0,13.2793710918528,11.6998733344257,4.59385571292016,9.90752591165872,14.0056301245828,27.5533958211742,18.146169342715,12.6386391073524,0,0,0,1.73310971850765,4.65457007003779,2.85837098767317,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,4.14247797122848,7.90870257844099,12.8323733389027,1.53985063787899,0,0,0,0,0,0,0,69.1922296139824,61.8919445748278,75.4259370172353,0,0,0,0,0,1.19840044207362,3.45796474789399,21.048991298621,21.8709620097339,23.135745748652,111.11823293308,102.7038715425,29.275301012374,23.0029130443767,44.122501757281,215.827126758802,226.006588410782,188.321609772154,67.2620067423989,47.3905993860482,57.8213841318004,163.042871416806,176.707459549947,166.397291828946,122.270862971572,106.494017237729,91.3357284543973,1.8931548333296,2.26714680320357,0.289864488701678,0,0,0.539703191637817,0,0,10.1119982494861,0,0,0,2.67602497575693,0,0,0,0,0,0,10.5049169341535,0,29.688427812965,6.24547176358089,11.2652226975492,7.37969591219387,9.79697163592047,14.8161770990988,12.4409925416379,0,0.433798070759735,0,0,0,0,39.1422698558057,90.7620470735796,92.3659977047337,29.6330184041966,0,0,0,155.033311783992,174.307729673897,51.015666957823,235.531953860535,245.742554494448,172.671865028994,190.471242841547,0,0,0,9.6803253707778,0.520481771850815,3.90833577536904,5.04173963454978,6.78171680260718,13.6753363294169,14.3487366719032,15.9292931751539,26.9051505568576,0,0.189106080167819,0,0,0.278047249225598,0,0.823128545631774,1.19420560091096,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0,0,0.402619256281115,194.728492370382,57.1120598705029,26.10308385572,13.2225283331772,1.06644125267617,2.55460339046482,10.5671318284117,16.7397325437374,10.6741461045538,21.6857213768317,18.506633400236,15.481701744057,23.8768448360256,23.8747766449381,24.5654749770091,29.6610404855893,20.7492527879706,22.1046813312348,0.189667900953082,2.62771579002376,0,0.610953983535943,0.193952487167626,1.05203729835478,0.252946148497029,0.295220295959204,0.784993639206874,0.493588655687202,0.592905254174298,0,0.196558995113203,0.224862112384854,0,0,1.01850340712568,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,1.47802552133284,0.568474235311454,0.162964976442026,0.848725428875941,0.469380496577004,1.00503754465089,0,0.975668239288994,0.315270288212382,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0.491764273019036,0,116.720278921125,119.907555383824,0,0.252470927204373,13.2513452154828,12.1036010731958,29.7284288871263,4.77937595905104,6.46116154838943,9.90767857760913,10.9298889452221,28.3488182173973,24.903130010631,117.603601810381,0,0.35613120733451,0.81443479676788,0,234.958894861734,46.1283208694465,63.7902705195625,129.948899951814,213.79857044568,163.555498706169,94.8431835927372,181.403331009275,158.284836002816,159.598562757587,264.600707523247,245.462592930685,326.481581917883,3.24109969256358,2.71653235943784,10.2881776815164,25.1823131772028,63.4992990663371,88.6919221045432,106.258267240995,0,0.63549621259146,21.6117830093863,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0,20.4036585640896,100.129663085675,0,4.74689796315412,1.66675074632741,0.188368457004691,0.136694227721025,0,0,0,0,82.1016731492998,1.26534397432454,18.2987520414164,19.6569720295678,28.0178316659388,39.7419866018043,43.6960482286819,46.3685886619135,89.5205321585381,14.9057219285562,1.86401793926078,2.25477175473676,0,0.165458490457098,0,0.387479470433193,0.675824501963113,0.58678619322877,0.13020438484395,0.209718688851422,0.483168241652012,0,0.316011120628178,0.810900861160657,0.102710957164827,0,0.358053391334963,0,0,0.295379054349154,0,0,0,0.682205165178267,0.384847366561318,0.233753804363138,7.02864189207155,0,0,0,1.15913756419314,0.187682475451182,0.183151624267265,3.42989406526505,2.00628841614145,263.73911050217,263.766360518612,296.186980448168,283.901457231772,271.977760348945,253.05695562555,249.083302585536,236.418631692716,238.352907125692,253.702552758392,1.03787347584177,8.77854721482268,11.0976843740187,8.99494853152688,6.70762120409543,6.43452279575049,12.8903102124937,10.9198580336614,15.0832028508153,10.8659801058433,13.1809235942925,12.6379648728671,12.735245015904,14.0855335290712,12.17631941859,10.0021675169445,13.3266974836584,10.0312794641127,14.4230065281157,13.1007038919614,10.9718160763333,12.0683548188349,10.7296285476294,14.3892952466005,12.516547595239,12.6921911837515,13.1708140468396,14.2057644176435,14.5310401815072,11.2228454331548,13.8802971205284,14.5786633915834,14.7323175541088,13.789378865551,12.1531164918119,28.9780270408017,11.462648813825,10.7435527024149,5.35607329792761,2.8676884485537,3.2461496986859 | |||
|short_description=p1@Ptprn2 | |||
}} |
Revision as of 22:30, 12 September 2013
Short description: | p1@Ptprn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptprn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:414 |
Association with transcript: | 0bp_to_ENSMUST00000070733, ENSMUST00000084823, NM_011215, uc007phv.2, uc007phw.2, uc007phx.2, uc011yvq.1_5end |
EntrezGene: | Ptprn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.80e-12 | 33 |
neuronal stem cell | 3.80e-12 | 33 |
neuroblast | 3.80e-12 | 33 |
electrically signaling cell | 3.80e-12 | 33 |
CNS neuron (sensu Vertebrata) | 8.44e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.44e-12 | 23 |
neural cell | 3.91e-10 | 43 |
ectodermal cell | 5.13e-10 | 44 |
neurectodermal cell | 5.13e-10 | 44 |
electrically responsive cell | 4.09e-08 | 39 |
electrically active cell | 4.09e-08 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.