FFCP PHASE1:Mm9::chr13:83854934..83854950,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=76|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:83854934..83854950,+|id=chr13:83854934..83854950,+|ontology_enrichment_celltype=CL:0000117!1.21e-16!23;CL:0000337!1.21e-16!23;CL:0002319!2.37e-11!43;CL:0000221!7.05e-11!44;CL:0000133!7.05e-11!44;CL:0000540!2.83e-09!33;CL:0000047!2.83e-09!33;CL:0000031!2.83e-09!33;CL:0000404!2.83e-09!33;CL:0000055!1.75e-08!50;CL:0002609!6.99e-08!6;CL:0000393!8.53e-07!39;CL:0000211!8.53e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.08e-15,23;CL:0000337,2.08e-15,23;CL:0002319,5.77e-10,43;CL:0000221,1.41e-09,44;CL:0000133,1.41e-09,44;CL:0002609,4.03e-09,6;CL:0000540,6.23e-09,33;CL:0000047,6.23e-09,33;CL:0000031,6.23e-09,33;CL:0000404,6.23e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.05e-28!34;UBERON:0001049!5.71e-27!52;UBERON:0005068!5.71e-27!52;UBERON:0006241!5.71e-27!52;UBERON:0007135!5.71e-27!52;UBERON:0000033!3.77e-26!63;UBERON:0001017!6.74e-26!73;UBERON:0005743!6.74e-26!73;UBERON:0000073!1.07e-24!75;UBERON:0001016!1.07e-24!75;UBERON:0002791!2.33e-24!29;UBERON:0003528!2.33e-24!29;UBERON:0001893!2.33e-24!29;UBERON:0002346!2.40e-24!71;UBERON:0003075!2.40e-24!71;UBERON:0007284!2.40e-24!71;UBERON:0003056!4.29e-24!49;UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!1.20e-22!49;UBERON:0004121!3.36e-21!102;UBERON:0000924!3.36e-21!102;UBERON:0006601!3.36e-21!102;UBERON:0002780!8.12e-21!39;UBERON:0001890!8.12e-21!39;UBERON:0006240!8.12e-21!39;UBERON:0003080!5.49e-20!40;UBERON:0000956!2.20e-19!21;UBERON:0001869!2.20e-19!21;UBERON:0000203!2.20e-19!21;UBERON:0002619!2.82e-15!17;UBERON:0007811!1.34e-14!86;UBERON:0000153!5.23e-12!94;UBERON:0002021!3.57e-09!10;UBERON:0000411!3.57e-09!10;UBERON:0001950!3.57e-09!10;UBERON:0001954!1.52e-07!7;UBERON:0003022!1.52e-07!7;UBERON:0002421!1.52e-07!7;UBERON:0000349!1.52e-07!7;UBERON:0002600!1.52e-07!7;UBERON:0003076!1.81e-07!12;UBERON:0003057!1.81e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.08e-30,34;UBERON:0003528,1.35e-25,29;UBERON:0002791,1.35e-25,29;UBERON:0001893,1.35e-25,29;UBERON:0001049,4.79e-23,52;UBERON:0005068,4.79e-23,52;UBERON:0006241,4.79e-23,52;UBERON:0007135,4.79e-23,52;UBERON:0000073,6.64e-23,54;UBERON:0000956,7.08e-23,21;UBERON:0001869,7.08e-23,21;UBERON:0000203,7.08e-23,21;UBERON:0002346,4.24e-22,64;UBERON:0003075,4.24e-22,64;UBERON:0007284,4.24e-22,64;UBERON:0001017,6.22e-21,73;UBERON:0000955,1.92e-20,47;UBERON:0006238,1.92e-20,47;UBERON:0001016,5.29e-20,75;UBERON:0002616,2.57e-19,46;UBERON:0002780,3.93e-19,39;UBERON:0001890,3.93e-19,39;UBERON:0006240,3.93e-19,39;UBERON:0003056,5.07e-19,49;UBERON:0003080,2.05e-18,40;UBERON:0002619,5.83e-18,17;UBERON:0010371,9.56e-18,73;UBERON:0004121,3.40e-17,95;UBERON:0000924,3.40e-17,95;UBERON:0006601,3.40e-17,95;UBERON:0010314,1.75e-11,92;UBERON:0002021,1.16e-10,10;UBERON:0000411,1.16e-10,10;UBERON:0001950,1.16e-10,10;UBERON:0001954,1.02e-08,7;UBERON:0003022,1.02e-08,7;UBERON:0002421,1.02e-08,7;UBERON:0000349,1.02e-08,7;UBERON:0002600,1.02e-08,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,3.95435128922049,1.94429899074283,0.979904951377538,2.87505128729943,0,0,0,0,0,0,4.24864567805155,5.28990979272033,3.1691570175309,0.677689064138264,0,0,0,0,0.299600110518405,1.92109152660777,44.3791540680284,47.9271081077502,48.5850660721692,2.28520787523043,2.20868540951614,21.8033622602618,20.8943126819755,8.27296907949019,0,0.893811366596314,1.0752457327937,3.69281605644543,3.11057988248193,8.85552729946492,1.11673199600552,0.56276261003168,0.763991238884051,5.59794312399969,4.9830088279686,6.89677949553612,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02673912827713,6.91174132484402,0,0,0,0,0,1.83000241127451,8.41884159156192,3.47648640384553,1.79000820131231,1.24672826735736,1.46017136760982,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,2.41127708537144,6.25935792192216,13.4519406299092,12.8371362646828,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,18.7286394530298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,23.4564560987919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,7.34177395402186,5.52390283808612,6.30185064783336,7.21783365843488,3.42541259885321,2.2661816921691,4.05013500139084,2.2516060161211,4.53142408984205,2.5888015587591,2.28332164685189,8.77854721482268,5.9756762013947,3.40349403895612,0.209613162627982,0.919217542250071,2.00022055021454,2.47242068686673,4.49286893428541,1.26348605881899,1.52087579934144,3.58390048633545,2.90288673156635,2.4969809437899,1.78049953762401,2.85776214769844,1.85414921511769,2.70072908649187,2.47251540481984,1.32479028120958,3.08582327146874,2.30718548007139,1.43061713968393,1.45346416632329,2.91739079287525,2.62305284464197,1.28049581010941,2.36762740294059,2.44447404922551,4.48913817326191,2.13543032623513,2.26560309463796,2.45538625901814,1.85924209423159,1.92906610981141,7.74412791607632,1.40358965067245,1.50409737833809,0,0,0.231867835620421|short_description=p@chr13:83854934..83854950,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:83854934..83854950,+ | |||
|id=chr13:83854934..83854950,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.21e-16!23;CL:0000337!1.21e-16!23;CL:0002319!2.37e-11!43;CL:0000221!7.05e-11!44;CL:0000133!7.05e-11!44;CL:0000540!2.83e-09!33;CL:0000047!2.83e-09!33;CL:0000031!2.83e-09!33;CL:0000404!2.83e-09!33;CL:0000055!1.75e-08!50;CL:0002609!6.99e-08!6;CL:0000393!8.53e-07!39;CL:0000211!8.53e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.08e-15,23;CL:0000337,2.08e-15,23;CL:0002319,5.77e-10,43;CL:0000221,1.41e-09,44;CL:0000133,1.41e-09,44;CL:0002609,4.03e-09,6;CL:0000540,6.23e-09,33;CL:0000047,6.23e-09,33;CL:0000031,6.23e-09,33;CL:0000404,6.23e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.05e-28!34;UBERON:0001049!5.71e-27!52;UBERON:0005068!5.71e-27!52;UBERON:0006241!5.71e-27!52;UBERON:0007135!5.71e-27!52;UBERON:0000033!3.77e-26!63;UBERON:0001017!6.74e-26!73;UBERON:0005743!6.74e-26!73;UBERON:0000073!1.07e-24!75;UBERON:0001016!1.07e-24!75;UBERON:0002791!2.33e-24!29;UBERON:0003528!2.33e-24!29;UBERON:0001893!2.33e-24!29;UBERON:0002346!2.40e-24!71;UBERON:0003075!2.40e-24!71;UBERON:0007284!2.40e-24!71;UBERON:0003056!4.29e-24!49;UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!1.20e-22!49;UBERON:0004121!3.36e-21!102;UBERON:0000924!3.36e-21!102;UBERON:0006601!3.36e-21!102;UBERON:0002780!8.12e-21!39;UBERON:0001890!8.12e-21!39;UBERON:0006240!8.12e-21!39;UBERON:0003080!5.49e-20!40;UBERON:0000956!2.20e-19!21;UBERON:0001869!2.20e-19!21;UBERON:0000203!2.20e-19!21;UBERON:0002619!2.82e-15!17;UBERON:0007811!1.34e-14!86;UBERON:0000153!5.23e-12!94;UBERON:0002021!3.57e-09!10;UBERON:0000411!3.57e-09!10;UBERON:0001950!3.57e-09!10;UBERON:0001954!1.52e-07!7;UBERON:0003022!1.52e-07!7;UBERON:0002421!1.52e-07!7;UBERON:0000349!1.52e-07!7;UBERON:0002600!1.52e-07!7;UBERON:0003076!1.81e-07!12;UBERON:0003057!1.81e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.08e-30,34;UBERON:0003528,1.35e-25,29;UBERON:0002791,1.35e-25,29;UBERON:0001893,1.35e-25,29;UBERON:0001049,4.79e-23,52;UBERON:0005068,4.79e-23,52;UBERON:0006241,4.79e-23,52;UBERON:0007135,4.79e-23,52;UBERON:0000073,6.64e-23,54;UBERON:0000956,7.08e-23,21;UBERON:0001869,7.08e-23,21;UBERON:0000203,7.08e-23,21;UBERON:0002346,4.24e-22,64;UBERON:0003075,4.24e-22,64;UBERON:0007284,4.24e-22,64;UBERON:0001017,6.22e-21,73;UBERON:0000955,1.92e-20,47;UBERON:0006238,1.92e-20,47;UBERON:0001016,5.29e-20,75;UBERON:0002616,2.57e-19,46;UBERON:0002780,3.93e-19,39;UBERON:0001890,3.93e-19,39;UBERON:0006240,3.93e-19,39;UBERON:0003056,5.07e-19,49;UBERON:0003080,2.05e-18,40;UBERON:0002619,5.83e-18,17;UBERON:0010371,9.56e-18,73;UBERON:0004121,3.40e-17,95;UBERON:0000924,3.40e-17,95;UBERON:0006601,3.40e-17,95;UBERON:0010314,1.75e-11,92;UBERON:0002021,1.16e-10,10;UBERON:0000411,1.16e-10,10;UBERON:0001950,1.16e-10,10;UBERON:0001954,1.02e-08,7;UBERON:0003022,1.02e-08,7;UBERON:0002421,1.02e-08,7;UBERON:0000349,1.02e-08,7;UBERON:0002600,1.02e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48840250208714,3.95435128922049,1.94429899074283,0.979904951377538,2.87505128729943,0,0,0,0,0,0,4.24864567805155,5.28990979272033,3.1691570175309,0.677689064138264,0,0,0,0,0.299600110518405,1.92109152660777,44.3791540680284,47.9271081077502,48.5850660721692,2.28520787523043,2.20868540951614,21.8033622602618,20.8943126819755,8.27296907949019,0,0.893811366596314,1.0752457327937,3.69281605644543,3.11057988248193,8.85552729946492,1.11673199600552,0.56276261003168,0.763991238884051,5.59794312399969,4.9830088279686,6.89677949553612,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02673912827713,6.91174132484402,0,0,0,0,0,1.83000241127451,8.41884159156192,3.47648640384553,1.79000820131231,1.24672826735736,1.46017136760982,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,2.41127708537144,6.25935792192216,13.4519406299092,12.8371362646828,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,18.7286394530298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,23.4564560987919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,7.34177395402186,5.52390283808612,6.30185064783336,7.21783365843488,3.42541259885321,2.2661816921691,4.05013500139084,2.2516060161211,4.53142408984205,2.5888015587591,2.28332164685189,8.77854721482268,5.9756762013947,3.40349403895612,0.209613162627982,0.919217542250071,2.00022055021454,2.47242068686673,4.49286893428541,1.26348605881899,1.52087579934144,3.58390048633545,2.90288673156635,2.4969809437899,1.78049953762401,2.85776214769844,1.85414921511769,2.70072908649187,2.47251540481984,1.32479028120958,3.08582327146874,2.30718548007139,1.43061713968393,1.45346416632329,2.91739079287525,2.62305284464197,1.28049581010941,2.36762740294059,2.44447404922551,4.48913817326191,2.13543032623513,2.26560309463796,2.45538625901814,1.85924209423159,1.92906610981141,7.74412791607632,1.40358965067245,1.50409737833809,0,0,0.231867835620421 | |||
|short_description=p@chr13:83854934..83854950,+ | |||
}} |
Revision as of 01:11, 13 September 2013
Short description: | p@chr13:83854934..83854950, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:83854934..83854950, + |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.08e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.08e-15 | 23 |
neural cell | 5.77e-10 | 43 |
ectodermal cell | 1.41e-09 | 44 |
neurectodermal cell | 1.41e-09 | 44 |
neuron of cerebral cortex | 4.03e-09 | 6 |
neuron | 6.23e-09 | 33 |
neuronal stem cell | 6.23e-09 | 33 |
neuroblast | 6.23e-09 | 33 |
electrically signaling cell | 6.23e-09 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.