FFCP PHASE1:Mm9::chr8:26711959..26711969,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=234135|HGNC=|MCL_coexpression_id=1501|UniProt=Q6P2L6|association_with_transcript=-103bp_to_ENSMUST00000155861_5end|description=CAGE_peak_17_at_Whsc1l1_5end|id=chr8:26711959..26711969,+|ontology_enrichment_celltype=CL:0000084!5.94e-09!11;CL:0000827!5.94e-09!11;CL:0000838!4.58e-08!12;CL:0000542!2.57e-07!13;CL:0000051!2.57e-07!13|ontology_enrichment_celltype_v019_2=CL:0000182,5.17e-18,5;CL:0000815,2.31e-11,1;CL:0000792,2.31e-11,1;CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1;CL:0000625,8.99e-11,1;CL:0000791,2.07e-10,9;CL:0000789,2.07e-10,9;CL:0002420,2.07e-10,9;CL:0002419,2.07e-10,9;CL:0000790,2.07e-10,9;CL:0000084,1.25e-08,11;CL:0000827,1.25e-08,11;CL:0000838,5.86e-08,12;CL:0002320,1.45e-07,46;CL:0000134,1.45e-07,46;CL:0000542,2.17e-07,13;CL:0000051,2.17e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000490!1.43e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.83e-11,1;UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1;UBERON:0002384,1.45e-07,46;UBERON:0002107,2.22e-07,22;UBERON:0007499,2.22e-07,22;UBERON:0006925,2.22e-07,22;UBERON:0009497,2.22e-07,22;UBERON:0000015,2.22e-07,22;UBERON:0002423,2.22e-07,22;UBERON:0006235,2.22e-07,22;UBERON:0008835,2.22e-07,22;UBERON:0003894,2.22e-07,22;UBERON:0004161,2.22e-07,22;UBERON:0008836,2.22e-07,22;UBERON:0009854,4.52e-07,23;UBERON:0009856,4.52e-07,23|phase1_expression=0,0,0,0,0,0.16787927191189,0,4.77756296733832,0,0.468129052643987,0,0.0797721589953364,1.54080656938085,0.874204024189974,0.333109761815663,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,1.44932244350839,0.860423876981386,0,0.539703191637817,1.29955283489534,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,8.40462890296871,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0.441182838239031,0|short_description=p17@Whsc1l1}} | ||
|EntrezGene=234135 | |||
|HGNC= | |||
|MCL_coexpression_id=1501 | |||
|UniProt=Q6P2L6 | |||
|association_with_transcript=-103bp_to_ENSMUST00000155861_5end | |||
|description=CAGE_peak_17_at_Whsc1l1_5end | |||
|id=chr8:26711959..26711969,+ | |||
|ontology_enrichment_celltype=CL:0000084!5.94e-09!11;CL:0000827!5.94e-09!11;CL:0000838!4.58e-08!12;CL:0000542!2.57e-07!13;CL:0000051!2.57e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.17e-18,5;CL:0000815,2.31e-11,1;CL:0000792,2.31e-11,1;CL:0000213,5.74e-11,1;CL:0002078,5.74e-11,1;CL:0000115,5.74e-11,1;CL:0002262,5.74e-11,1;CL:1000398,5.74e-11,1;CL:0000625,8.99e-11,1;CL:0000791,2.07e-10,9;CL:0000789,2.07e-10,9;CL:0002420,2.07e-10,9;CL:0002419,2.07e-10,9;CL:0000790,2.07e-10,9;CL:0000084,1.25e-08,11;CL:0000827,1.25e-08,11;CL:0000838,5.86e-08,12;CL:0002320,1.45e-07,46;CL:0000134,1.45e-07,46;CL:0000542,2.17e-07,13;CL:0000051,2.17e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.43e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.83e-11,1;UBERON:0002394,5.74e-11,1;UBERON:0001281,5.74e-11,1;UBERON:0000353,5.74e-11,1;UBERON:0003497,5.74e-11,1;UBERON:0003909,5.74e-11,1;UBERON:0003928,5.74e-11,1;UBERON:0003835,5.74e-11,1;UBERON:0003513,5.74e-11,1;UBERON:0001280,5.74e-11,1;UBERON:0004647,5.74e-11,1;UBERON:0002294,5.74e-11,1;UBERON:0001173,5.74e-11,1;UBERON:0004912,5.74e-11,1;UBERON:0005171,5.74e-11,1;UBERON:0002384,1.45e-07,46;UBERON:0002107,2.22e-07,22;UBERON:0007499,2.22e-07,22;UBERON:0006925,2.22e-07,22;UBERON:0009497,2.22e-07,22;UBERON:0000015,2.22e-07,22;UBERON:0002423,2.22e-07,22;UBERON:0006235,2.22e-07,22;UBERON:0008835,2.22e-07,22;UBERON:0003894,2.22e-07,22;UBERON:0004161,2.22e-07,22;UBERON:0008836,2.22e-07,22;UBERON:0009854,4.52e-07,23;UBERON:0009856,4.52e-07,23 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,4.77756296733832,0,0.468129052643987,0,0.0797721589953364,1.54080656938085,0.874204024189974,0.333109761815663,0,0,0,0,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,1.44932244350839,0.860423876981386,0,0.539703191637817,1.29955283489534,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0,0,8.40462890296871,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0.365855945745545,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0.382576664137687,0.441182838239031,0 | |||
|short_description=p17@Whsc1l1 | |||
}} |
Revision as of 15:25, 14 September 2013
Short description: | p17@Whsc1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Whsc1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1501 |
Association with transcript: | -103bp_to_ENSMUST00000155861_5end |
EntrezGene: | Whsc1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.17e-18 | 5 |
regulatory T cell | 2.31e-11 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.31e-11 | 1 |
lining cell | 5.74e-11 | 1 |
meso-epithelial cell | 5.74e-11 | 1 |
endothelial cell | 5.74e-11 | 1 |
endothelial cell of sinusoid | 5.74e-11 | 1 |
endothelial cell of hepatic sinusoid | 5.74e-11 | 1 |
CD8-positive, alpha-beta T cell | 8.99e-11 | 1 |
mature alpha-beta T cell | 2.07e-10 | 9 |
alpha-beta T cell | 2.07e-10 | 9 |
immature T cell | 2.07e-10 | 9 |
mature T cell | 2.07e-10 | 9 |
immature alpha-beta T cell | 2.07e-10 | 9 |
T cell | 1.25e-08 | 11 |
pro-T cell | 1.25e-08 | 11 |
lymphoid lineage restricted progenitor cell | 5.86e-08 | 12 |
connective tissue cell | 1.45e-07 | 46 |
mesenchymal cell | 1.45e-07 | 46 |
lymphocyte | 2.17e-07 | 13 |
common lymphoid progenitor | 2.17e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.83e-11 | 1 |
bile duct | 5.74e-11 | 1 |
hepatic sinusoid | 5.74e-11 | 1 |
parenchyma | 5.74e-11 | 1 |
abdomen blood vessel | 5.74e-11 | 1 |
sinusoid | 5.74e-11 | 1 |
digestive system duct | 5.74e-11 | 1 |
abdominal segment blood vessel | 5.74e-11 | 1 |
trunk blood vessel | 5.74e-11 | 1 |
liver parenchyma | 5.74e-11 | 1 |
liver lobule | 5.74e-11 | 1 |
biliary system | 5.74e-11 | 1 |
biliary tree | 5.74e-11 | 1 |
biliary bud | 5.74e-11 | 1 |
hepatic duct | 5.74e-11 | 1 |
connective tissue | 1.45e-07 | 46 |
liver | 2.22e-07 | 22 |
epithelial sac | 2.22e-07 | 22 |
digestive gland | 2.22e-07 | 22 |
epithelium of foregut-midgut junction | 2.22e-07 | 22 |
anatomical boundary | 2.22e-07 | 22 |
hepatobiliary system | 2.22e-07 | 22 |
foregut-midgut junction | 2.22e-07 | 22 |
hepatic diverticulum | 2.22e-07 | 22 |
liver primordium | 2.22e-07 | 22 |
septum transversum | 2.22e-07 | 22 |
liver bud | 2.22e-07 | 22 |
digestive tract diverticulum | 4.52e-07 | 23 |
sac | 4.52e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.