FFCP PHASE1:Mm9::chr7:107425158..107425160,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=145|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:107425158..107425160,+|id=chr7:107425158..107425160,+|ontology_enrichment_celltype=CL:0000117!2.66e-11!23;CL:0000337!2.66e-11!23;CL:0000540!3.39e-07!33;CL:0000047!3.39e-07!33;CL:0000031!3.39e-07!33;CL:0000404!3.39e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-15,23;CL:0000337,1.51e-15,23;CL:0002612,4.54e-13,3;CL:0002610,2.31e-12,3;CL:0000540,2.43e-10,33;CL:0000047,2.43e-10,33;CL:0000031,2.43e-10,33;CL:0000404,2.43e-10,33;CL:0000393,1.69e-08,39;CL:0000211,1.69e-08,39;CL:0002319,1.48e-07,43;CL:0000221,2.40e-07,44;CL:0000133,2.40e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.68e-15!34;UBERON:0001049!1.29e-13!52;UBERON:0005068!1.29e-13!52;UBERON:0006241!1.29e-13!52;UBERON:0007135!1.29e-13!52;UBERON:0000955!1.69e-12!50;UBERON:0006238!1.69e-12!50;UBERON:0000073!4.36e-12!75;UBERON:0001016!4.36e-12!75;UBERON:0002616!4.64e-12!49;UBERON:0001017!6.51e-12!73;UBERON:0005743!6.51e-12!73;UBERON:0002791!1.12e-11!29;UBERON:0003528!1.12e-11!29;UBERON:0001893!1.12e-11!29;UBERON:0000033!6.37e-11!63;UBERON:0002346!1.66e-10!71;UBERON:0003075!1.66e-10!71;UBERON:0007284!1.66e-10!71;UBERON:0003080!2.01e-09!40;UBERON:0002021!2.12e-09!10;UBERON:0000411!2.12e-09!10;UBERON:0001950!2.12e-09!10;UBERON:0003056!4.57e-09!49;UBERON:0002780!6.18e-09!39;UBERON:0001890!6.18e-09!39;UBERON:0006240!6.18e-09!39;UBERON:0004121!3.94e-08!102;UBERON:0000924!3.94e-08!102;UBERON:0006601!3.94e-08!102;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0007811!4.57e-08!86;UBERON:0000153!1.10e-07!94;UBERON:0002619!5.78e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.31e-24,10;UBERON:0000411,1.31e-24,10;UBERON:0001950,1.31e-24,10;UBERON:0002020,1.05e-23,34;UBERON:0000073,9.32e-21,54;UBERON:0003528,1.04e-14,29;UBERON:0002791,1.04e-14,29;UBERON:0001893,1.04e-14,29;UBERON:0001049,1.46e-14,52;UBERON:0005068,1.46e-14,52;UBERON:0006241,1.46e-14,52;UBERON:0007135,1.46e-14,52;UBERON:0001017,1.58e-14,73;UBERON:0001016,4.69e-14,75;UBERON:0002619,4.99e-14,17;UBERON:0001948,4.07e-13,5;UBERON:0002315,4.07e-13,5;UBERON:0002257,4.54e-13,3;UBERON:0002346,5.69e-13,64;UBERON:0003075,5.69e-13,64;UBERON:0007284,5.69e-13,64;UBERON:0004684,2.31e-12,3;UBERON:0002275,2.31e-12,3;UBERON:0004121,9.03e-12,95;UBERON:0000924,9.03e-12,95;UBERON:0006601,9.03e-12,95;UBERON:0000956,3.84e-11,21;UBERON:0001869,3.84e-11,21;UBERON:0000203,3.84e-11,21;UBERON:0010371,5.18e-11,73;UBERON:0002240,5.95e-11,6;UBERON:0005174,5.95e-11,6;UBERON:0001137,5.95e-11,6;UBERON:0002780,1.87e-10,39;UBERON:0001890,1.87e-10,39;UBERON:0006240,1.87e-10,39;UBERON:0003080,3.82e-10,40;UBERON:0003056,1.84e-09,49;UBERON:0002616,1.42e-08,46;UBERON:0010147,1.91e-08,2;UBERON:0003937,1.91e-08,2;UBERON:0005399,1.91e-08,2;UBERON:0000955,2.37e-08,47;UBERON:0006238,2.37e-08,47;UBERON:0010314,3.94e-08,92;UBERON:0004111,2.78e-07,122|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0.699561878128147,0.157731082679119,0,0.42438965179803,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,1.32521124570968,0.122490799214954,0.191690942036473,0,1.10115880999389,2.29837208553338,3.5329502648936,0.395658863190582,0.731901148819277,1.04182674111352,0.279182999001381,3.37657566019008,2.29197371665215,9.42811473515737,5.12538050876771,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,1.07940638327563,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0.239630249011841,0,0,0.449371918214468,0,0.502617408451458,0.521472960576829,2.30143911597297,0.83115217823824,0.973447578406546,0,0.248813941220186,0.505445516867349,0,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0.485561272309963,0,0,0,0,0,0,0.712994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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=145 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:107425158..107425160,+ | |||
|id=chr7:107425158..107425160,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.66e-11!23;CL:0000337!2.66e-11!23;CL:0000540!3.39e-07!33;CL:0000047!3.39e-07!33;CL:0000031!3.39e-07!33;CL:0000404!3.39e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-15,23;CL:0000337,1.51e-15,23;CL:0002612,4.54e-13,3;CL:0002610,2.31e-12,3;CL:0000540,2.43e-10,33;CL:0000047,2.43e-10,33;CL:0000031,2.43e-10,33;CL:0000404,2.43e-10,33;CL:0000393,1.69e-08,39;CL:0000211,1.69e-08,39;CL:0002319,1.48e-07,43;CL:0000221,2.40e-07,44;CL:0000133,2.40e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.68e-15!34;UBERON:0001049!1.29e-13!52;UBERON:0005068!1.29e-13!52;UBERON:0006241!1.29e-13!52;UBERON:0007135!1.29e-13!52;UBERON:0000955!1.69e-12!50;UBERON:0006238!1.69e-12!50;UBERON:0000073!4.36e-12!75;UBERON:0001016!4.36e-12!75;UBERON:0002616!4.64e-12!49;UBERON:0001017!6.51e-12!73;UBERON:0005743!6.51e-12!73;UBERON:0002791!1.12e-11!29;UBERON:0003528!1.12e-11!29;UBERON:0001893!1.12e-11!29;UBERON:0000033!6.37e-11!63;UBERON:0002346!1.66e-10!71;UBERON:0003075!1.66e-10!71;UBERON:0007284!1.66e-10!71;UBERON:0003080!2.01e-09!40;UBERON:0002021!2.12e-09!10;UBERON:0000411!2.12e-09!10;UBERON:0001950!2.12e-09!10;UBERON:0003056!4.57e-09!49;UBERON:0002780!6.18e-09!39;UBERON:0001890!6.18e-09!39;UBERON:0006240!6.18e-09!39;UBERON:0004121!3.94e-08!102;UBERON:0000924!3.94e-08!102;UBERON:0006601!3.94e-08!102;UBERON:0000956!4.19e-08!21;UBERON:0001869!4.19e-08!21;UBERON:0000203!4.19e-08!21;UBERON:0007811!4.57e-08!86;UBERON:0000153!1.10e-07!94;UBERON:0002619!5.78e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.31e-24,10;UBERON:0000411,1.31e-24,10;UBERON:0001950,1.31e-24,10;UBERON:0002020,1.05e-23,34;UBERON:0000073,9.32e-21,54;UBERON:0003528,1.04e-14,29;UBERON:0002791,1.04e-14,29;UBERON:0001893,1.04e-14,29;UBERON:0001049,1.46e-14,52;UBERON:0005068,1.46e-14,52;UBERON:0006241,1.46e-14,52;UBERON:0007135,1.46e-14,52;UBERON:0001017,1.58e-14,73;UBERON:0001016,4.69e-14,75;UBERON:0002619,4.99e-14,17;UBERON:0001948,4.07e-13,5;UBERON:0002315,4.07e-13,5;UBERON:0002257,4.54e-13,3;UBERON:0002346,5.69e-13,64;UBERON:0003075,5.69e-13,64;UBERON:0007284,5.69e-13,64;UBERON:0004684,2.31e-12,3;UBERON:0002275,2.31e-12,3;UBERON:0004121,9.03e-12,95;UBERON:0000924,9.03e-12,95;UBERON:0006601,9.03e-12,95;UBERON:0000956,3.84e-11,21;UBERON:0001869,3.84e-11,21;UBERON:0000203,3.84e-11,21;UBERON:0010371,5.18e-11,73;UBERON:0002240,5.95e-11,6;UBERON:0005174,5.95e-11,6;UBERON:0001137,5.95e-11,6;UBERON:0002780,1.87e-10,39;UBERON:0001890,1.87e-10,39;UBERON:0006240,1.87e-10,39;UBERON:0003080,3.82e-10,40;UBERON:0003056,1.84e-09,49;UBERON:0002616,1.42e-08,46;UBERON:0010147,1.91e-08,2;UBERON:0003937,1.91e-08,2;UBERON:0005399,1.91e-08,2;UBERON:0000955,2.37e-08,47;UBERON:0006238,2.37e-08,47;UBERON:0010314,3.94e-08,92;UBERON:0004111,2.78e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0.699561878128147,0.157731082679119,0,0.42438965179803,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0.404632921719196,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,1.32521124570968,0.122490799214954,0.191690942036473,0,1.10115880999389,2.29837208553338,3.5329502648936,0.395658863190582,0.731901148819277,1.04182674111352,0.279182999001381,3.37657566019008,2.29197371665215,9.42811473515737,5.12538050876771,2.05039390407831,0.075726193333184,0.0755715601067855,0,0,0,1.07940638327563,0,0,0,0,0,0.35333957451034,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.628340120440365,0,0.239630249011841,0,0,0.449371918214468,0,0.502617408451458,0.521472960576829,2.30143911597297,0.83115217823824,0.973447578406546,0,0.248813941220186,0.505445516867349,0,0,0,0,0.150704817835715,0.204109497453984,0.384341160854549,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0.141940085208269,0,0,0.494910368917606,0,0.485561272309963,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,1.54369878638473,0,0,0,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0,0.241584120826006,0,0,0,0.102710957164827,0.25984164595559,0,0,0.240390899039938,0,0.100966449948148,0.15241361331,0,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,1.50471631210609,2.25900737046827,3.68260189205742,4.01026859407578,7.04598047609119,1.37016503954128,3.0215755895588,0.675022500231806,0.45032120322422,1.81256963593682,2.07104124700728,0.31136204275253,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0,0,0,0.231768651889711,0.38581844092741,0.824171801606613,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.526139422875686,0,0,0.355905054372522,0.29551344712669,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr7:107425158..107425160,+ | |||
}} |
Revision as of 11:14, 14 September 2013
Short description: | p@chr7:107425158..107425160, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:107425158..107425160, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-15 | 23 |
neuron of the ventral spinal cord | 4.54e-13 | 3 |
raphe nuclei neuron | 2.31e-12 | 3 |
neuron | 2.43e-10 | 33 |
neuronal stem cell | 2.43e-10 | 33 |
neuroblast | 2.43e-10 | 33 |
electrically signaling cell | 2.43e-10 | 33 |
electrically responsive cell | 1.69e-08 | 39 |
electrically active cell | 1.69e-08 | 39 |
neural cell | 1.48e-07 | 43 |
ectodermal cell | 2.40e-07 | 44 |
neurectodermal cell | 2.40e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.