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FFCP PHASE1:Mm9::chr3:123393768..123393801,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=83398|HGNC=|MCL_coexpression_id=30|UniProt=Q9EQH7|association_with_transcript=0bp_to_ENSMUST00000137404,uc008rfq.1_5end|description=CAGE_peak_3_at_Ndst3_5end|id=chr3:123393768..123393801,-|ontology_enrichment_celltype=CL:0002319!1.50e-17!43;CL:0000221!1.92e-17!44;CL:0000133!1.92e-17!44;CL:0000540!6.91e-17!33;CL:0000047!6.91e-17!33;CL:0000031!6.91e-17!33;CL:0000404!6.91e-17!33;CL:0000055!8.83e-16!50;CL:0000393!1.65e-15!39;CL:0000211!1.65e-15!39;CL:0000117!7.14e-12!23;CL:0000337!7.14e-12!23|ontology_enrichment_celltype_v019_2=CL:0000540,3.87e-25,33;CL:0000047,3.87e-25,33;CL:0000031,3.87e-25,33;CL:0000404,3.87e-25,33;CL:0000393,3.73e-23,39;CL:0000211,3.73e-23,39;CL:0002319,2.77e-22,43;CL:0000221,1.42e-21,44;CL:0000133,1.42e-21,44;CL:0000117,8.25e-18,23;CL:0000337,8.25e-18,23;CL:0002321,3.91e-12,70;CL:0000107,2.27e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0001017!2.91e-31!73;UBERON:0005743!2.91e-31!73;UBERON:0004121!1.59e-28!102;UBERON:0000924!1.59e-28!102;UBERON:0006601!1.59e-28!102;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0001049!6.25e-21!52;UBERON:0005068!6.25e-21!52;UBERON:0006241!6.25e-21!52;UBERON:0007135!6.25e-21!52;UBERON:0000955!2.01e-20!50;UBERON:0006238!2.01e-20!50;UBERON:0002616!6.72e-20!49;UBERON:0000033!2.24e-19!63;UBERON:0002020!3.65e-16!34;UBERON:0003056!1.41e-15!49;UBERON:0003080!5.02e-15!40;UBERON:0002780!2.47e-14!39;UBERON:0001890!2.47e-14!39;UBERON:0006240!2.47e-14!39;UBERON:0002791!6.23e-14!29;UBERON:0003528!6.23e-14!29;UBERON:0001893!6.23e-14!29;UBERON:0000956!9.24e-11!21;UBERON:0001869!9.24e-11!21;UBERON:0000203!9.24e-11!21;UBERON:0002619!4.38e-09!17;UBERON:0007811!4.58e-08!86;UBERON:0000153!1.73e-07!94;UBERON:0000010!2.00e-07!11;UBERON:0002021!5.38e-07!10;UBERON:0000411!5.38e-07!10;UBERON:0001950!5.38e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-42,75;UBERON:0001017,3.50e-40,73;UBERON:0004121,2.79e-32,95;UBERON:0000924,2.79e-32,95;UBERON:0006601,2.79e-32,95;UBERON:0000073,8.70e-27,54;UBERON:0001049,2.35e-24,52;UBERON:0005068,2.35e-24,52;UBERON:0006241,2.35e-24,52;UBERON:0007135,2.35e-24,52;UBERON:0002346,4.36e-22,64;UBERON:0003075,4.36e-22,64;UBERON:0007284,4.36e-22,64;UBERON:0000955,7.94e-21,47;UBERON:0006238,7.94e-21,47;UBERON:0002616,6.31e-20,46;UBERON:0002020,6.55e-20,34;UBERON:0010371,4.82e-18,73;UBERON:0003528,9.44e-17,29;UBERON:0002791,9.44e-17,29;UBERON:0001893,9.44e-17,29;UBERON:0003080,1.58e-16,40;UBERON:0002780,2.27e-15,39;UBERON:0001890,2.27e-15,39;UBERON:0006240,2.27e-15,39;UBERON:0010314,7.48e-14,92;UBERON:0003056,1.86e-13,49;UBERON:0000956,1.68e-12,21;UBERON:0001869,1.68e-12,21;UBERON:0000203,1.68e-12,21;UBERON:0000010,1.61e-11,11;UBERON:0002021,7.29e-11,10;UBERON:0000411,7.29e-11,10;UBERON:0001950,7.29e-11,10;UBERON:0002619,2.66e-10,17;UBERON:0002410,2.27e-09,9;UBERON:0011216,3.41e-09,194;UBERON:0003076,1.34e-08,12;UBERON:0003057,1.34e-08,12;UBERON:0000025,4.06e-07,114|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,0.540023753326763,1.26194976810829,1.14260393761521,1.10434270475807,1.10241719293459,0.575072826109418,3.67687514644008,4.40463523997555,2.93680877595932,1.68967186581868,2.2420668914133,1.55528994124096,2.08365348222704,0.279182999001381,1.12552522006336,1.83357897332172,0.589257170947335,1.99320353118744,2.79599168737951,1.36307147999731,2.49386148352392,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,0,18.1524094147159,13.823482649688,0,0,0,0,3.2953940669061,1.37250180845588,0.753926112677186,4.17178368461463,4.34716277461562,1.66230435647648,2.43361894601636,0.407357455401265,0,0,0.420883711772948,0,0.229902104433473,0.720248519221397,0.150704817835715,0.95251098811859,0.640568601424249,0.749613796477831,2.32833033665114,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0,0.32833492815819,0.486412857275134,0.146199987425332,0.219550115291051,0,3.57492912559016,0.823236899034275,0,0,0.426576501070468,0.928946687441754,1.15980715189884,0.605050573870028,0.889512175379481,0.380451252225118,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0.342745537829186,0,0.61095398353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|EntrezGene=83398
|HGNC=
|MCL_coexpression_id=30
|UniProt=Q9EQH7
|association_with_transcript=0bp_to_ENSMUST00000137404,uc008rfq.1_5end
|description=CAGE_peak_3_at_Ndst3_5end
|id=chr3:123393768..123393801,-
|ontology_enrichment_celltype=CL:0002319!1.50e-17!43;CL:0000221!1.92e-17!44;CL:0000133!1.92e-17!44;CL:0000540!6.91e-17!33;CL:0000047!6.91e-17!33;CL:0000031!6.91e-17!33;CL:0000404!6.91e-17!33;CL:0000055!8.83e-16!50;CL:0000393!1.65e-15!39;CL:0000211!1.65e-15!39;CL:0000117!7.14e-12!23;CL:0000337!7.14e-12!23
|ontology_enrichment_celltype_v019_2=CL:0000540,3.87e-25,33;CL:0000047,3.87e-25,33;CL:0000031,3.87e-25,33;CL:0000404,3.87e-25,33;CL:0000393,3.73e-23,39;CL:0000211,3.73e-23,39;CL:0002319,2.77e-22,43;CL:0000221,1.42e-21,44;CL:0000133,1.42e-21,44;CL:0000117,8.25e-18,23;CL:0000337,8.25e-18,23;CL:0002321,3.91e-12,70;CL:0000107,2.27e-09,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.24e-32!75;UBERON:0001016!1.24e-32!75;UBERON:0001017!2.91e-31!73;UBERON:0005743!2.91e-31!73;UBERON:0004121!1.59e-28!102;UBERON:0000924!1.59e-28!102;UBERON:0006601!1.59e-28!102;UBERON:0002346!1.82e-21!71;UBERON:0003075!1.82e-21!71;UBERON:0007284!1.82e-21!71;UBERON:0001049!6.25e-21!52;UBERON:0005068!6.25e-21!52;UBERON:0006241!6.25e-21!52;UBERON:0007135!6.25e-21!52;UBERON:0000955!2.01e-20!50;UBERON:0006238!2.01e-20!50;UBERON:0002616!6.72e-20!49;UBERON:0000033!2.24e-19!63;UBERON:0002020!3.65e-16!34;UBERON:0003056!1.41e-15!49;UBERON:0003080!5.02e-15!40;UBERON:0002780!2.47e-14!39;UBERON:0001890!2.47e-14!39;UBERON:0006240!2.47e-14!39;UBERON:0002791!6.23e-14!29;UBERON:0003528!6.23e-14!29;UBERON:0001893!6.23e-14!29;UBERON:0000956!9.24e-11!21;UBERON:0001869!9.24e-11!21;UBERON:0000203!9.24e-11!21;UBERON:0002619!4.38e-09!17;UBERON:0007811!4.58e-08!86;UBERON:0000153!1.73e-07!94;UBERON:0000010!2.00e-07!11;UBERON:0002021!5.38e-07!10;UBERON:0000411!5.38e-07!10;UBERON:0001950!5.38e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-42,75;UBERON:0001017,3.50e-40,73;UBERON:0004121,2.79e-32,95;UBERON:0000924,2.79e-32,95;UBERON:0006601,2.79e-32,95;UBERON:0000073,8.70e-27,54;UBERON:0001049,2.35e-24,52;UBERON:0005068,2.35e-24,52;UBERON:0006241,2.35e-24,52;UBERON:0007135,2.35e-24,52;UBERON:0002346,4.36e-22,64;UBERON:0003075,4.36e-22,64;UBERON:0007284,4.36e-22,64;UBERON:0000955,7.94e-21,47;UBERON:0006238,7.94e-21,47;UBERON:0002616,6.31e-20,46;UBERON:0002020,6.55e-20,34;UBERON:0010371,4.82e-18,73;UBERON:0003528,9.44e-17,29;UBERON:0002791,9.44e-17,29;UBERON:0001893,9.44e-17,29;UBERON:0003080,1.58e-16,40;UBERON:0002780,2.27e-15,39;UBERON:0001890,2.27e-15,39;UBERON:0006240,2.27e-15,39;UBERON:0010314,7.48e-14,92;UBERON:0003056,1.86e-13,49;UBERON:0000956,1.68e-12,21;UBERON:0001869,1.68e-12,21;UBERON:0000203,1.68e-12,21;UBERON:0000010,1.61e-11,11;UBERON:0002021,7.29e-11,10;UBERON:0000411,7.29e-11,10;UBERON:0001950,7.29e-11,10;UBERON:0002619,2.66e-10,17;UBERON:0002410,2.27e-09,9;UBERON:0011216,3.41e-09,194;UBERON:0003076,1.34e-08,12;UBERON:0003057,1.34e-08,12;UBERON:0000025,4.06e-07,114
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0.782391344348039,0.218025156380447,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,3.03474691289397,3.1739458756322,3.1691570175309,0,0,0,0,0,0.599200221036809,1.15265491596466,1.24427534770173,0.540023753326763,1.26194976810829,1.14260393761521,1.10434270475807,1.10241719293459,0.575072826109418,3.67687514644008,4.40463523997555,2.93680877595932,1.68967186581868,2.2420668914133,1.55528994124096,2.08365348222704,0.279182999001381,1.12552522006336,1.83357897332172,0.589257170947335,1.99320353118744,2.79599168737951,1.36307147999731,2.49386148352392,0,0,0,0,0,0,0,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.485300549842228,0,0,0,18.1524094147159,13.823482649688,0,0,0,0,3.2953940669061,1.37250180845588,0.753926112677186,4.17178368461463,4.34716277461562,1.66230435647648,2.43361894601636,0.407357455401265,0,0,0.420883711772948,0,0.229902104433473,0.720248519221397,0.150704817835715,0.95251098811859,0.640568601424249,0.749613796477831,2.32833033665114,0,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0.467061369468678,0,0.32833492815819,0.486412857275134,0.146199987425332,0.219550115291051,0,3.57492912559016,0.823236899034275,0,0,0.426576501070468,0.928946687441754,1.15980715189884,0.605050573870028,0.889512175379481,0.380451252225118,0,0.329397909448022,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.648414149624083,0.199141273254367,0,0.342745537829186,0,0.610953983535943,0.775809948670503,0.280543279561274,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0,0,0,0.315270288212382,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,2.56880943980467,1.99259867206745,0.163934945376675,0,0.94652465824877,1.17131623288992,1.93881057959519,2.38968797952552,2.00518806674155,3.11384183867716,2.42886421004937,2.63030272120181,2.37172666767914,1.28528526568723,0,0.890328018336276,0.488660878060728,0.494910368917606,0,0,0.906970670894253,0,0,0.307435147943927,0.775284879504663,0.727067458955011,0,0.316036757935816,0,0,5.44703369206061,0.36012218806262,0.129358683782755,0,0.886701168211368,0.356737635204141,0.987294123612726,0,0.23467170806371,0,0,0.32977250588296,0.645857706783622,0.72375509913787,0.954978752025092,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,1.90934123603023,0.949007980743406,0.203319467126849,0.756037385752609,0.836353184057875,0.218362563746178,0.134864346384821,0.330613822901344,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,4.01026859407578,1.3748254587495,2.74033007908257,0.755393897389701,2.02506750069542,3.15224842256954,2.71885445390523,4.65984280576638,0.31136204275253,0.798049746802062,1.36586884603307,0.729320151204882,0.209613162627982,0.183843508450014,1.11123363900808,1.03017528619447,0.320919209591815,0.505394423527595,1.01391719956096,0.754505365544305,0.561849044819294,0.640251524048693,0.516919220600519,0,0.695305955669133,0.964546102318525,0.824171801606613,1.03039244094078,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,1.03520318456864,0.592302255241736,0.914639864363863,2.10455769150274,0.407412341537585,0,0.593175090620871,0.591026894253381,0.409231043169689,0.77468420592983,0.385813221962283,0.999242311751784,0,1.28922632428979,0.191288332068843,0,0.463735671240843
|short_description=p3@Ndst3
}}

Revision as of 01:26, 14 September 2013

Short description:p3@Ndst3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ndst3_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 0bp_to_ENSMUST00000137404, uc008rfq.1_5end
EntrezGene:Ndst3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ndst3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.23e-4275
central nervous system3.50e-4073
ectoderm-derived structure2.79e-3295
ectoderm2.79e-3295
presumptive ectoderm2.79e-3295
regional part of nervous system8.70e-2754
neural tube2.35e-2452
neural rod2.35e-2452
future spinal cord2.35e-2452
neural keel2.35e-2452
neurectoderm4.36e-2264
neural plate4.36e-2264
presumptive neural plate4.36e-2264
brain7.94e-2147
future brain7.94e-2147
regional part of brain6.31e-2046
gray matter6.55e-2034
ecto-epithelium4.82e-1873
brain grey matter9.44e-1729
regional part of telencephalon9.44e-1729
telencephalon9.44e-1729
anterior neural tube1.58e-1640
regional part of forebrain2.27e-1539
forebrain2.27e-1539
future forebrain2.27e-1539
structure with developmental contribution from neural crest7.48e-1492
pre-chordal neural plate1.86e-1349
cerebral cortex1.68e-1221
cerebral hemisphere1.68e-1221
pallium1.68e-1221
peripheral nervous system1.61e-1111
occipital lobe7.29e-1110
visual cortex7.29e-1110
neocortex7.29e-1110
regional part of cerebral cortex2.66e-1017
autonomic nervous system2.27e-099
organ system subdivision3.41e-09194
posterior neural tube1.34e-0812
chordal neural plate1.34e-0812
tube4.06e-07114







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