FFCP PHASE1:Mm9::chr19:42160809..42160824,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226123|HGNC=|MCL_coexpression_id=643|UniProt=Q6PGF2|association_with_transcript=35bp_to_ENSMUST00000051772,NM_198108,uc008hne.1_5end|description=CAGE_peak_2_at_Morn4_5end|id=chr19:42160809..42160824,-|ontology_enrichment_celltype=CL:0000221!4.65e-18!44;CL:0000133!4.65e-18!44;CL:0002319!1.43e-17!43;CL:0000540!7.91e-15!33;CL:0000047!7.91e-15!33;CL:0000031!7.91e-15!33;CL:0000404!7.91e-15!33;CL:0000055!1.45e-14!50;CL:0000117!2.97e-13!23;CL:0000337!2.97e-13!23;CL:0000393!1.64e-12!39;CL:0000211!1.64e-12!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.74e-24,44;CL:0000133,1.74e-24,44;CL:0002319,9.94e-24,43;CL:0000117,6.65e-21,23;CL:0000337,6.65e-21,23;CL:0000540,2.47e-19,33;CL:0000047,2.47e-19,33;CL:0000031,2.47e-19,33;CL:0000404,2.47e-19,33;CL:0000393,8.02e-15,39;CL:0000211,8.02e-15,39;CL:0002321,1.12e-11,70;CL:0002609,1.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!9.46e-27!75;UBERON:0001016!9.46e-27!75;UBERON:0001017!5.15e-26!73;UBERON:0005743!5.15e-26!73;UBERON:0004121!5.43e-26!102;UBERON:0000924!5.43e-26!102;UBERON:0006601!5.43e-26!102;UBERON:0002346!1.92e-21!71;UBERON:0003075!1.92e-21!71;UBERON:0007284!1.92e-21!71;UBERON:0001049!7.35e-20!52;UBERON:0005068!7.35e-20!52;UBERON:0006241!7.35e-20!52;UBERON:0007135!7.35e-20!52;UBERON:0000033!1.47e-19!63;UBERON:0003056!1.98e-17!49;UBERON:0000955!4.18e-17!50;UBERON:0006238!4.18e-17!50;UBERON:0002616!1.34e-16!49;UBERON:0003080!1.81e-14!40;UBERON:0002020!2.46e-14!34;UBERON:0002780!4.92e-14!39;UBERON:0001890!4.92e-14!39;UBERON:0006240!4.92e-14!39;UBERON:0002791!1.22e-11!29;UBERON:0003528!1.22e-11!29;UBERON:0001893!1.22e-11!29;UBERON:0007811!1.07e-08!86;UBERON:0000153!2.85e-08!94;UBERON:0000956!2.64e-07!21;UBERON:0001869!2.64e-07!21;UBERON:0000203!2.64e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.04e-33,75;UBERON:0001017,1.40e-32,73;UBERON:0004121,1.54e-32,95;UBERON:0000924,1.54e-32,95;UBERON:0006601,1.54e-32,95;UBERON:0002346,6.14e-28,64;UBERON:0003075,6.14e-28,64;UBERON:0007284,6.14e-28,64;UBERON:0000073,5.70e-26,54;UBERON:0001049,5.90e-26,52;UBERON:0005068,5.90e-26,52;UBERON:0006241,5.90e-26,52;UBERON:0007135,5.90e-26,52;UBERON:0010371,1.17e-24,73;UBERON:0000955,1.24e-21,47;UBERON:0006238,1.24e-21,47;UBERON:0003056,4.48e-21,49;UBERON:0002020,7.15e-21,34;UBERON:0002616,7.33e-21,46;UBERON:0003080,1.21e-18,40;UBERON:0002780,5.68e-18,39;UBERON:0001890,5.68e-18,39;UBERON:0006240,5.68e-18,39;UBERON:0003528,1.27e-16,29;UBERON:0002791,1.27e-16,29;UBERON:0001893,1.27e-16,29;UBERON:0010314,2.43e-15,92;UBERON:0000956,7.38e-10,21;UBERON:0001869,7.38e-10,21;UBERON:0000203,7.38e-10,21;UBERON:0002420,1.57e-08,8;UBERON:0007245,1.57e-08,8;UBERON:0010009,1.57e-08,8;UBERON:0010011,1.57e-08,8;UBERON:0000454,1.57e-08,8;UBERON:0003076,7.16e-08,12;UBERON:0003057,7.16e-08,12;UBERON:0001954,8.88e-08,7;UBERON:0003022,8.88e-08,7;UBERON:0002421,8.88e-08,7;UBERON:0000349,8.88e-08,7;UBERON:0002600,8.88e-08,7|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,1.56478268869608,1.52617609466313,2.19686182734472,1.55543919259427,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,8.09265843438391,4.7609188134483,8.87363964908651,1.0165335962074,0,0.899899717281399,0,0,1.79760066311043,1.92109152660777,5.08079100311541,3.51015439662396,4.83747411108179,3.99911378165325,3.09215957332259,5.38959516545798,4.2172007248024,7.35375029288017,0,2.29837208553338,1.99688493233117,6.3305418110493,5.6722339033494,3.64639359389732,1.95428099300967,2.8138130501584,3.66715794664344,1.17851434189467,3.27454865837937,5.03278503728312,1.06016670666458,1.5870027622425,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,2.11265129665021,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.823120949949934,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,1.9472783122627,1.37250180845588,9.42407640846483,2.78118912307642,2.04572365864264,1.45451631191692,2.75810147215188,0.916554274652847,0.248813941220186,1.51633655060205,0.420883711772948,1.30120442962704,2.5289231487682,2.34080768746954,0.90422890701429,3.12967896096108,2.43416068541215,2.52994656311268,0.517406741478031,1.94011193639558,0.567318240503458,0.879755620819744,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,2.94405927989778,7.9236551532049,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,2.26201687920243,1.79060824837036,1.559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| ||
|EntrezGene=226123 | |||
|HGNC= | |||
|MCL_coexpression_id=643 | |||
|UniProt=Q6PGF2 | |||
|association_with_transcript=35bp_to_ENSMUST00000051772,NM_198108,uc008hne.1_5end | |||
|description=CAGE_peak_2_at_Morn4_5end | |||
|id=chr19:42160809..42160824,- | |||
|ontology_enrichment_celltype=CL:0000221!4.65e-18!44;CL:0000133!4.65e-18!44;CL:0002319!1.43e-17!43;CL:0000540!7.91e-15!33;CL:0000047!7.91e-15!33;CL:0000031!7.91e-15!33;CL:0000404!7.91e-15!33;CL:0000055!1.45e-14!50;CL:0000117!2.97e-13!23;CL:0000337!2.97e-13!23;CL:0000393!1.64e-12!39;CL:0000211!1.64e-12!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.74e-24,44;CL:0000133,1.74e-24,44;CL:0002319,9.94e-24,43;CL:0000117,6.65e-21,23;CL:0000337,6.65e-21,23;CL:0000540,2.47e-19,33;CL:0000047,2.47e-19,33;CL:0000031,2.47e-19,33;CL:0000404,2.47e-19,33;CL:0000393,8.02e-15,39;CL:0000211,8.02e-15,39;CL:0002321,1.12e-11,70;CL:0002609,1.05e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.46e-27!75;UBERON:0001016!9.46e-27!75;UBERON:0001017!5.15e-26!73;UBERON:0005743!5.15e-26!73;UBERON:0004121!5.43e-26!102;UBERON:0000924!5.43e-26!102;UBERON:0006601!5.43e-26!102;UBERON:0002346!1.92e-21!71;UBERON:0003075!1.92e-21!71;UBERON:0007284!1.92e-21!71;UBERON:0001049!7.35e-20!52;UBERON:0005068!7.35e-20!52;UBERON:0006241!7.35e-20!52;UBERON:0007135!7.35e-20!52;UBERON:0000033!1.47e-19!63;UBERON:0003056!1.98e-17!49;UBERON:0000955!4.18e-17!50;UBERON:0006238!4.18e-17!50;UBERON:0002616!1.34e-16!49;UBERON:0003080!1.81e-14!40;UBERON:0002020!2.46e-14!34;UBERON:0002780!4.92e-14!39;UBERON:0001890!4.92e-14!39;UBERON:0006240!4.92e-14!39;UBERON:0002791!1.22e-11!29;UBERON:0003528!1.22e-11!29;UBERON:0001893!1.22e-11!29;UBERON:0007811!1.07e-08!86;UBERON:0000153!2.85e-08!94;UBERON:0000956!2.64e-07!21;UBERON:0001869!2.64e-07!21;UBERON:0000203!2.64e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.04e-33,75;UBERON:0001017,1.40e-32,73;UBERON:0004121,1.54e-32,95;UBERON:0000924,1.54e-32,95;UBERON:0006601,1.54e-32,95;UBERON:0002346,6.14e-28,64;UBERON:0003075,6.14e-28,64;UBERON:0007284,6.14e-28,64;UBERON:0000073,5.70e-26,54;UBERON:0001049,5.90e-26,52;UBERON:0005068,5.90e-26,52;UBERON:0006241,5.90e-26,52;UBERON:0007135,5.90e-26,52;UBERON:0010371,1.17e-24,73;UBERON:0000955,1.24e-21,47;UBERON:0006238,1.24e-21,47;UBERON:0003056,4.48e-21,49;UBERON:0002020,7.15e-21,34;UBERON:0002616,7.33e-21,46;UBERON:0003080,1.21e-18,40;UBERON:0002780,5.68e-18,39;UBERON:0001890,5.68e-18,39;UBERON:0006240,5.68e-18,39;UBERON:0003528,1.27e-16,29;UBERON:0002791,1.27e-16,29;UBERON:0001893,1.27e-16,29;UBERON:0010314,2.43e-15,92;UBERON:0000956,7.38e-10,21;UBERON:0001869,7.38e-10,21;UBERON:0000203,7.38e-10,21;UBERON:0002420,1.57e-08,8;UBERON:0007245,1.57e-08,8;UBERON:0010009,1.57e-08,8;UBERON:0010011,1.57e-08,8;UBERON:0000454,1.57e-08,8;UBERON:0003076,7.16e-08,12;UBERON:0003057,7.16e-08,12;UBERON:0001954,8.88e-08,7;UBERON:0003022,8.88e-08,7;UBERON:0002421,8.88e-08,7;UBERON:0000349,8.88e-08,7;UBERON:0002600,8.88e-08,7 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,1.56478268869608,1.52617609466313,2.19686182734472,1.55543919259427,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,0,8.09265843438391,4.7609188134483,8.87363964908651,1.0165335962074,0,0.899899717281399,0,0,1.79760066311043,1.92109152660777,5.08079100311541,3.51015439662396,4.83747411108179,3.99911378165325,3.09215957332259,5.38959516545798,4.2172007248024,7.35375029288017,0,2.29837208553338,1.99688493233117,6.3305418110493,5.6722339033494,3.64639359389732,1.95428099300967,2.8138130501584,3.66715794664344,1.17851434189467,3.27454865837937,5.03278503728312,1.06016670666458,1.5870027622425,0.289864488701678,0,0,0,0,0,0.421333260395256,0.340860645156116,0,0,2.11265129665021,0,2.54805239706646,0,0,0,0,0.5709193985953,0,0.445326417194474,0.173485326766136,0,0.461230994512117,0.301445281105245,0.823120949949934,0.502666365318702,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.67557365450764,0,0,0,0,1.9472783122627,1.37250180845588,9.42407640846483,2.78118912307642,2.04572365864264,1.45451631191692,2.75810147215188,0.916554274652847,0.248813941220186,1.51633655060205,0.420883711772948,1.30120442962704,2.5289231487682,2.34080768746954,0.90422890701429,3.12967896096108,2.43416068541215,2.52994656311268,0.517406741478031,1.94011193639558,0.567318240503458,0.879755620819744,0.657587197282725,0.556094498451196,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,2.94405927989778,7.9236551532049,0,0,0.853153002140936,0.928946687441754,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,2.26201687920243,1.79060824837036,1.55971269695296,0,0,0,0.569003702859245,1.48523066392647,2.25415471346161,0.814605311381257,0.581857461502877,1.1221731182451,0.632365371242573,0.738050739898011,0.470996183524124,0.493588655687202,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0.549122826376163,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,1.50791283939272,0,0,0,1.12385412991454,2.46144541843627,0.327869890753351,0,0.315508219416257,0.390438744296638,2.15423397732799,0.716906393857656,1.33679204449436,0.849229592366497,2.02405350837447,2.92255857911312,3.16230222357219,2.24924921495265,0.709700426041343,0.35613120733451,0.977321756121456,0.329940245945071,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,1.03135543248187,1.70219802876894,1.08036656418786,1.29358683782755,1.71469628025274,0.532020700926821,0.713475270408282,0.822745103010605,1.2178597964584,0.469343416127421,0,0.220528398054962,0.32977250588296,0.161464426695906,0.542816324353403,1.07435109602823,0.984845398470368,0,2.22510362412612,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0.839708713941948,0,0,0.949007980743406,0.406638934253697,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,17.4744810992099,0.897099276263873,0.827292452285488,0.777804753376191,0.516639293910924,0.506868376472335,1.17357238645754,0.2604087696879,0.209718688851422,2.89900944991207,5.76060012515731,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0.358855426437903,0.335769232728157,0.579568782096571,0.375364950902364,0,0.214368379079066,0,1.12950368523413,3.22227665555024,2.29158205375759,2.23409137046794,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,0,1.55681021376265,1.99512436700516,1.02440163452481,0.972426868273176,1.88651846365184,0.735374033800057,0.44449345560323,1.64828045791115,0.962757628775446,1.76888048234658,0.50695859978048,0.377252682772152,0.561849044819294,1.28050304809739,1.37845125493472,1.42888107384922,1.39061191133827,1.54327376370964,0.412085900803307,1.32479028120958,0.342869252385415,0.887379030796687,0.953744759789284,0.436039249896986,0.658765662907314,1.01537529470012,1.28049581010941,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,1.28055827088233,0.818462086339379,0.77468420592983,0.771626443924566,2.74791635731741,0.467863216890817,0.644613162144895,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Morn4 | |||
}} |
Revision as of 17:39, 13 September 2013
Short description: | p2@Morn4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Morn4_5end |
Coexpression cluster: | MCL_coexpression_mm9:643 |
Association with transcript: | 35bp_to_ENSMUST00000051772, NM_198108, uc008hne.1_5end |
EntrezGene: | Morn4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.74e-24 | 44 |
neurectodermal cell | 1.74e-24 | 44 |
neural cell | 9.94e-24 | 43 |
CNS neuron (sensu Vertebrata) | 6.65e-21 | 23 |
neuroblast (sensu Vertebrata) | 6.65e-21 | 23 |
neuron | 2.47e-19 | 33 |
neuronal stem cell | 2.47e-19 | 33 |
neuroblast | 2.47e-19 | 33 |
electrically signaling cell | 2.47e-19 | 33 |
electrically responsive cell | 8.02e-15 | 39 |
electrically active cell | 8.02e-15 | 39 |
embryonic cell | 1.12e-11 | 70 |
neuron of cerebral cortex | 1.05e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.