FFCP PHASE1:Mm9::chr10:59568646..59568658,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=94214|HGNC=|MCL_coexpression_id=1|UniProt=Q9ER58|association_with_transcript=-308bp_to_ENSMUST00000121820,ENSMUST00000138976_5end|description=CAGE_peak_11_at_Spock2_5end|id=chr10:59568646..59568658,+|ontology_enrichment_celltype=CL:0000117!2.37e-15!23;CL:0000337!2.37e-15!23;CL:0000540!2.40e-08!33;CL:0000047!2.40e-08!33;CL:0000031!2.40e-08!33;CL:0000404!2.40e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.79e-20,23;CL:0000337,8.79e-20,23;CL:0000540,1.12e-12,33;CL:0000047,1.12e-12,33;CL:0000031,1.12e-12,33;CL:0000404,1.12e-12,33;CL:0000393,3.52e-10,39;CL:0000211,3.52e-10,39;CL:0002319,6.58e-09,43;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002612,3.88e-08,3;CL:0002610,6.26e-08,3;CL:0002614,2.52e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.54e-24!52;UBERON:0005068!3.54e-24!52;UBERON:0006241!3.54e-24!52;UBERON:0007135!3.54e-24!52;UBERON:0002346!3.94e-23!71;UBERON:0003075!3.94e-23!71;UBERON:0007284!3.94e-23!71;UBERON:0000955!2.60e-22!50;UBERON:0006238!2.60e-22!50;UBERON:0000033!3.03e-22!63;UBERON:0002616!1.51e-21!49;UBERON:0001017!4.85e-20!73;UBERON:0005743!4.85e-20!73;UBERON:0003056!9.22e-20!49;UBERON:0000073!1.89e-19!75;UBERON:0001016!1.89e-19!75;UBERON:0003080!7.10e-18!40;UBERON:0002020!2.32e-17!34;UBERON:0004121!4.04e-17!102;UBERON:0000924!4.04e-17!102;UBERON:0006601!4.04e-17!102;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!2.33e-13!29;UBERON:0003528!2.33e-13!29;UBERON:0001893!2.33e-13!29;UBERON:0007811!1.92e-11!86;UBERON:0000153!8.00e-10!94;UBERON:0000956!9.20e-09!21;UBERON:0001869!9.20e-09!21;UBERON:0000203!9.20e-09!21;UBERON:0002619!5.94e-07!17;UBERON:0003076!6.54e-07!12;UBERON:0003057!6.54e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.43e-27,54;UBERON:0001017,1.64e-25,73;UBERON:0001016,1.23e-24,75;UBERON:0001049,6.48e-24,52;UBERON:0005068,6.48e-24,52;UBERON:0006241,6.48e-24,52;UBERON:0007135,6.48e-24,52;UBERON:0002346,7.09e-20,64;UBERON:0003075,7.09e-20,64;UBERON:0007284,7.09e-20,64;UBERON:0004121,2.78e-19,95;UBERON:0000924,2.78e-19,95;UBERON:0006601,2.78e-19,95;UBERON:0003076,2.28e-18,12;UBERON:0003057,2.28e-18,12;UBERON:0010371,1.26e-16,73;UBERON:0000955,5.86e-16,47;UBERON:0006238,5.86e-16,47;UBERON:0002020,1.33e-15,34;UBERON:0002240,8.43e-15,6;UBERON:0005174,8.43e-15,6;UBERON:0001137,8.43e-15,6;UBERON:0002616,1.21e-14,46;UBERON:0001948,1.46e-12,5;UBERON:0002315,1.46e-12,5;UBERON:0010314,7.20e-12,92;UBERON:0003080,1.60e-10,40;UBERON:0002950,2.01e-09,4;UBERON:0001891,2.01e-09,4;UBERON:0009616,2.01e-09,4;UBERON:0010286,2.01e-09,4;UBERON:0002780,2.50e-09,39;UBERON:0001890,2.50e-09,39;UBERON:0006240,2.50e-09,39;UBERON:0003056,4.36e-09,49;UBERON:0003528,1.85e-08,29;UBERON:0002791,1.85e-08,29;UBERON:0001893,1.85e-08,29;UBERON:0000025,2.24e-08,114;UBERON:0002257,3.88e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0004111,2.01e-07,122;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0002420,7.29e-07,8;UBERON:0007245,7.29e-07,8;UBERON:0010009,7.29e-07,8;UBERON:0010011,7.29e-07,8;UBERON:0000454,7.29e-07,8|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,5.42736870367227,4.41737081903227,0.367472397644862,0.287536413054709,2.75765635983006,5.50579404996943,3.31987079021488,3.22573719838111,0.395658863190582,0.731901148819277,2.6045668527838,1.95428099300967,4.50210088025344,2.75036845998258,4.71405736757868,5.12538050876771,3.54158947068071,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,1.25668024088073,0,0,0,0,3.89455662452539,4.11750542536764,0.376963056338593,3.30266208365325,1.27857728665165,6.2336413367868,1.78465389374533,0.101839363850316,0.124406970610093,0.758168275301024,0,0.650602214813519,0.229902104433473,1.80062129805349,0.753524089178575,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,0.823236899034275,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,5.61927064957272,3.16471553798949,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.89189184779626,0.567760340833074,0.534196811001766,0.488660878060728,1.97964147567043,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,1.02131881726136,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.904118764344118,0.844780627453891,1.05621514781179,4.55715346953825,5.55754525456268,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0.36630324853453,0,0,1.6942555278512,0.460325236507177,0,2.23409137046794,0.685082519770642,0.755393897389701,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0.93408612825759,2.79317411380722,0.512200817262403,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.214871054048298,0.191288332068843,0,0.463735671240843|short_description=p11@Spock2}} | ||
|EntrezGene=94214 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9ER58 | |||
|association_with_transcript=-308bp_to_ENSMUST00000121820,ENSMUST00000138976_5end | |||
|description=CAGE_peak_11_at_Spock2_5end | |||
|id=chr10:59568646..59568658,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.37e-15!23;CL:0000337!2.37e-15!23;CL:0000540!2.40e-08!33;CL:0000047!2.40e-08!33;CL:0000031!2.40e-08!33;CL:0000404!2.40e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.79e-20,23;CL:0000337,8.79e-20,23;CL:0000540,1.12e-12,33;CL:0000047,1.12e-12,33;CL:0000031,1.12e-12,33;CL:0000404,1.12e-12,33;CL:0000393,3.52e-10,39;CL:0000211,3.52e-10,39;CL:0002319,6.58e-09,43;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002612,3.88e-08,3;CL:0002610,6.26e-08,3;CL:0002614,2.52e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.54e-24!52;UBERON:0005068!3.54e-24!52;UBERON:0006241!3.54e-24!52;UBERON:0007135!3.54e-24!52;UBERON:0002346!3.94e-23!71;UBERON:0003075!3.94e-23!71;UBERON:0007284!3.94e-23!71;UBERON:0000955!2.60e-22!50;UBERON:0006238!2.60e-22!50;UBERON:0000033!3.03e-22!63;UBERON:0002616!1.51e-21!49;UBERON:0001017!4.85e-20!73;UBERON:0005743!4.85e-20!73;UBERON:0003056!9.22e-20!49;UBERON:0000073!1.89e-19!75;UBERON:0001016!1.89e-19!75;UBERON:0003080!7.10e-18!40;UBERON:0002020!2.32e-17!34;UBERON:0004121!4.04e-17!102;UBERON:0000924!4.04e-17!102;UBERON:0006601!4.04e-17!102;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!2.33e-13!29;UBERON:0003528!2.33e-13!29;UBERON:0001893!2.33e-13!29;UBERON:0007811!1.92e-11!86;UBERON:0000153!8.00e-10!94;UBERON:0000956!9.20e-09!21;UBERON:0001869!9.20e-09!21;UBERON:0000203!9.20e-09!21;UBERON:0002619!5.94e-07!17;UBERON:0003076!6.54e-07!12;UBERON:0003057!6.54e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.43e-27,54;UBERON:0001017,1.64e-25,73;UBERON:0001016,1.23e-24,75;UBERON:0001049,6.48e-24,52;UBERON:0005068,6.48e-24,52;UBERON:0006241,6.48e-24,52;UBERON:0007135,6.48e-24,52;UBERON:0002346,7.09e-20,64;UBERON:0003075,7.09e-20,64;UBERON:0007284,7.09e-20,64;UBERON:0004121,2.78e-19,95;UBERON:0000924,2.78e-19,95;UBERON:0006601,2.78e-19,95;UBERON:0003076,2.28e-18,12;UBERON:0003057,2.28e-18,12;UBERON:0010371,1.26e-16,73;UBERON:0000955,5.86e-16,47;UBERON:0006238,5.86e-16,47;UBERON:0002020,1.33e-15,34;UBERON:0002240,8.43e-15,6;UBERON:0005174,8.43e-15,6;UBERON:0001137,8.43e-15,6;UBERON:0002616,1.21e-14,46;UBERON:0001948,1.46e-12,5;UBERON:0002315,1.46e-12,5;UBERON:0010314,7.20e-12,92;UBERON:0003080,1.60e-10,40;UBERON:0002950,2.01e-09,4;UBERON:0001891,2.01e-09,4;UBERON:0009616,2.01e-09,4;UBERON:0010286,2.01e-09,4;UBERON:0002780,2.50e-09,39;UBERON:0001890,2.50e-09,39;UBERON:0006240,2.50e-09,39;UBERON:0003056,4.36e-09,49;UBERON:0003528,1.85e-08,29;UBERON:0002791,1.85e-08,29;UBERON:0001893,1.85e-08,29;UBERON:0000025,2.24e-08,114;UBERON:0002257,3.88e-08,3;UBERON:0004684,6.26e-08,3;UBERON:0002275,6.26e-08,3;UBERON:0004111,2.01e-07,122;UBERON:0002038,2.52e-07,3;UBERON:0009663,2.52e-07,3;UBERON:0009661,2.52e-07,3;UBERON:0000125,2.52e-07,3;UBERON:0002308,2.52e-07,3;UBERON:0002420,7.29e-07,8;UBERON:0007245,7.29e-07,8;UBERON:0010009,7.29e-07,8;UBERON:0010011,7.29e-07,8;UBERON:0000454,7.29e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.606949382578793,2.64495489636016,3.1691570175309,0,0,0,0,0,0,0,0.311068836925433,0.540023753326763,0.630974884054146,5.42736870367227,4.41737081903227,0.367472397644862,0.287536413054709,2.75765635983006,5.50579404996943,3.31987079021488,3.22573719838111,0.395658863190582,0.731901148819277,2.6045668527838,1.95428099300967,4.50210088025344,2.75036845998258,4.71405736757868,5.12538050876771,3.54158947068071,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,2.63502717310392,1.25668024088073,0,0,0,0,3.89455662452539,4.11750542536764,0.376963056338593,3.30266208365325,1.27857728665165,6.2336413367868,1.78465389374533,0.101839363850316,0.124406970610093,0.758168275301024,0,0.650602214813519,0.229902104433473,1.80062129805349,0.753524089178575,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,0.823236899034275,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0,0.379335801906163,0.342745537829186,1.1270773567308,0.610953983535943,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,5.61927064957272,3.16471553798949,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.89189184779626,0.567760340833074,0.534196811001766,0.488660878060728,1.97964147567043,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,1.03135543248187,1.02131881726136,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.904118764344118,0.844780627453891,1.05621514781179,4.55715346953825,5.55754525456268,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0,0.187682475451182,0.36630324853453,0,0,1.6942555278512,0.460325236507177,0,2.23409137046794,0.685082519770642,0.755393897389701,2.70009000092722,0.900642406448441,1.35942722695261,0.51776031175182,0.93408612825759,2.79317411380722,0.512200817262403,0,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.214871054048298,0.191288332068843,0,0.463735671240843 | |||
|short_description=p11@Spock2 | |||
}} |
Revision as of 16:58, 12 September 2013
Short description: | p11@Spock2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Spock2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -308bp_to_ENSMUST00000121820, ENSMUST00000138976_5end |
EntrezGene: | Spock2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.79e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.79e-20 | 23 |
neuron | 1.12e-12 | 33 |
neuronal stem cell | 1.12e-12 | 33 |
neuroblast | 1.12e-12 | 33 |
electrically signaling cell | 1.12e-12 | 33 |
electrically responsive cell | 3.52e-10 | 39 |
electrically active cell | 3.52e-10 | 39 |
neural cell | 6.58e-09 | 43 |
ectodermal cell | 1.26e-08 | 44 |
neurectodermal cell | 1.26e-08 | 44 |
neuron of the ventral spinal cord | 3.88e-08 | 3 |
raphe nuclei neuron | 6.26e-08 | 3 |
neuron of the substantia nigra | 2.52e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.