FFCP PHASE1:Mm9::chr18:86881030..86881042,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12405|HGNC=|MCL_coexpression_id=159|UniProt=|association_with_transcript=0bp_to_uc008fvb.1_5end|description=CAGE_peak_3_at_Cbln2_5end|id=chr18:86881030..86881042,+|ontology_enrichment_celltype=CL:0000117!8.67e-16!23;CL:0000337!8.67e-16!23;CL:0000540!5.95e-12!33;CL:0000047!5.95e-12!33;CL:0000031!5.95e-12!33;CL:0000404!5.95e-12!33;CL:0002319!1.91e-10!43;CL:0000221!5.73e-10!44;CL:0000133!5.73e-10!44;CL:0000393!2.68e-09!39;CL:0000211!2.68e-09!39;CL:0000055!4.35e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.48e-32,23;CL:0000337,6.48e-32,23;CL:0000540,3.36e-21,33;CL:0000047,3.36e-21,33;CL:0000031,3.36e-21,33;CL:0000404,3.36e-21,33;CL:0000393,2.09e-17,39;CL:0000211,2.09e-17,39;CL:0002319,1.82e-15,43;CL:0000221,4.89e-15,44;CL:0000133,4.89e-15,44;CL:0002613,1.47e-10,3;CL:0002612,2.11e-10,3;CL:0002610,3.46e-10,3;CL:0002614,9.17e-10,3;CL:0002321,3.45e-08,70;CL:0002611,5.50e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!8.27e-22!71;UBERON:0003075!8.27e-22!71;UBERON:0007284!8.27e-22!71;UBERON:0001017!2.07e-20!73;UBERON:0005743!2.07e-20!73;UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0004121!2.19e-19!102;UBERON:0000924!2.19e-19!102;UBERON:0006601!2.19e-19!102;UBERON:0000033!6.54e-19!63;UBERON:0001049!1.04e-18!52;UBERON:0005068!1.04e-18!52;UBERON:0006241!1.04e-18!52;UBERON:0007135!1.04e-18!52;UBERON:0003056!2.06e-18!49;UBERON:0000955!6.58e-17!50;UBERON:0006238!6.58e-17!50;UBERON:0002616!2.71e-16!49;UBERON:0002020!4.62e-14!34;UBERON:0003080!4.64e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0000153!1.89e-11!94;UBERON:0002791!4.20e-10!29;UBERON:0003528!4.20e-10!29;UBERON:0001893!4.20e-10!29;UBERON:0007811!7.69e-10!86;UBERON:0002240!9.53e-07!6;UBERON:0005174!9.53e-07!6;UBERON:0001137!9.53e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.97e-26,54;UBERON:0001017,6.19e-24,73;UBERON:0001016,3.66e-23,75;UBERON:0001049,5.11e-22,52;UBERON:0005068,5.11e-22,52;UBERON:0006241,5.11e-22,52;UBERON:0007135,5.11e-22,52;UBERON:0002240,2.24e-18,6;UBERON:0005174,2.24e-18,6;UBERON:0001137,2.24e-18,6;UBERON:0002020,1.58e-17,34;UBERON:0004121,3.19e-17,95;UBERON:0000924,3.19e-17,95;UBERON:0006601,3.19e-17,95;UBERON:0002346,4.58e-17,64;UBERON:0003075,4.58e-17,64;UBERON:0007284,4.58e-17,64;UBERON:0001948,9.42e-16,5;UBERON:0002315,9.42e-16,5;UBERON:0003076,2.71e-15,12;UBERON:0003057,2.71e-15,12;UBERON:0010371,2.03e-14,73;UBERON:0002420,7.50e-14,8;UBERON:0007245,7.50e-14,8;UBERON:0010009,7.50e-14,8;UBERON:0010011,7.50e-14,8;UBERON:0000454,7.50e-14,8;UBERON:0002950,1.68e-12,4;UBERON:0001891,1.68e-12,4;UBERON:0009616,1.68e-12,4;UBERON:0010286,1.68e-12,4;UBERON:0002616,5.93e-12,46;UBERON:0000955,1.24e-11,47;UBERON:0006238,1.24e-11,47;UBERON:0010314,1.57e-10,92;UBERON:0003080,1.74e-10,40;UBERON:0002257,2.11e-10,3;UBERON:0004684,3.46e-10,3;UBERON:0002275,3.46e-10,3;UBERON:0002038,9.17e-10,3;UBERON:0009663,9.17e-10,3;UBERON:0009661,9.17e-10,3;UBERON:0000125,9.17e-10,3;UBERON:0002308,9.17e-10,3;UBERON:0002780,4.22e-09,39;UBERON:0001890,4.22e-09,39;UBERON:0006240,4.22e-09,39;UBERON:0003528,7.34e-09,29;UBERON:0002791,7.34e-09,29;UBERON:0001893,7.34e-09,29;UBERON:0003056,4.44e-08,49;UBERON:0000025,1.19e-07,114;UBERON:0002256,5.50e-07,2;UBERON:0004111,7.30e-07,122;UBERON:0001896,8.88e-07,2;UBERON:0002298,8.88e-07,2;UBERON:0005290,8.88e-07,2;UBERON:0010096,8.88e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.540023753326763,0,1.14260393761521,2.65042249141936,0,0.383381884072945,0.919218786610021,3.30347642998166,1.14918604276669,2.76491759861238,2.50583946687368,3.84248103130121,2.08365348222704,1.11673199600552,2.8138130501584,1.5279824777681,2.94628585473668,1.42371680799103,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.64769703345305,0,0.251308704225729,1.21677024134594,1.02286182932132,2.28566849015516,0.648965052271031,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.816437989815934,0.2562274405697,0.562210347358373,0.517406741478031,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,1.11218899690239,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0.902072229254653,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.28932855251423,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,1.92903331528433,0.532020700926821,0.535106452806212,0.822745103010605,0,0,0,0,0,0.322928853391811,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.168956125490778,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0,2.07104124700728,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.512201219238954,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.118635018124174,0.689531376628944,0,0.464810523557898,0.192906610981141,0.999242311751784,0.701794825336225,0,0.382576664137687,0.882365676478062,0.231867835620421|short_description=p3@Cbln2}} | ||
|EntrezGene=12405 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008fvb.1_5end | |||
|description=CAGE_peak_3_at_Cbln2_5end | |||
|id=chr18:86881030..86881042,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.67e-16!23;CL:0000337!8.67e-16!23;CL:0000540!5.95e-12!33;CL:0000047!5.95e-12!33;CL:0000031!5.95e-12!33;CL:0000404!5.95e-12!33;CL:0002319!1.91e-10!43;CL:0000221!5.73e-10!44;CL:0000133!5.73e-10!44;CL:0000393!2.68e-09!39;CL:0000211!2.68e-09!39;CL:0000055!4.35e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.48e-32,23;CL:0000337,6.48e-32,23;CL:0000540,3.36e-21,33;CL:0000047,3.36e-21,33;CL:0000031,3.36e-21,33;CL:0000404,3.36e-21,33;CL:0000393,2.09e-17,39;CL:0000211,2.09e-17,39;CL:0002319,1.82e-15,43;CL:0000221,4.89e-15,44;CL:0000133,4.89e-15,44;CL:0002613,1.47e-10,3;CL:0002612,2.11e-10,3;CL:0002610,3.46e-10,3;CL:0002614,9.17e-10,3;CL:0002321,3.45e-08,70;CL:0002611,5.50e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.27e-22!71;UBERON:0003075!8.27e-22!71;UBERON:0007284!8.27e-22!71;UBERON:0001017!2.07e-20!73;UBERON:0005743!2.07e-20!73;UBERON:0000073!5.05e-20!75;UBERON:0001016!5.05e-20!75;UBERON:0004121!2.19e-19!102;UBERON:0000924!2.19e-19!102;UBERON:0006601!2.19e-19!102;UBERON:0000033!6.54e-19!63;UBERON:0001049!1.04e-18!52;UBERON:0005068!1.04e-18!52;UBERON:0006241!1.04e-18!52;UBERON:0007135!1.04e-18!52;UBERON:0003056!2.06e-18!49;UBERON:0000955!6.58e-17!50;UBERON:0006238!6.58e-17!50;UBERON:0002616!2.71e-16!49;UBERON:0002020!4.62e-14!34;UBERON:0003080!4.64e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0000153!1.89e-11!94;UBERON:0002791!4.20e-10!29;UBERON:0003528!4.20e-10!29;UBERON:0001893!4.20e-10!29;UBERON:0007811!7.69e-10!86;UBERON:0002240!9.53e-07!6;UBERON:0005174!9.53e-07!6;UBERON:0001137!9.53e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.97e-26,54;UBERON:0001017,6.19e-24,73;UBERON:0001016,3.66e-23,75;UBERON:0001049,5.11e-22,52;UBERON:0005068,5.11e-22,52;UBERON:0006241,5.11e-22,52;UBERON:0007135,5.11e-22,52;UBERON:0002240,2.24e-18,6;UBERON:0005174,2.24e-18,6;UBERON:0001137,2.24e-18,6;UBERON:0002020,1.58e-17,34;UBERON:0004121,3.19e-17,95;UBERON:0000924,3.19e-17,95;UBERON:0006601,3.19e-17,95;UBERON:0002346,4.58e-17,64;UBERON:0003075,4.58e-17,64;UBERON:0007284,4.58e-17,64;UBERON:0001948,9.42e-16,5;UBERON:0002315,9.42e-16,5;UBERON:0003076,2.71e-15,12;UBERON:0003057,2.71e-15,12;UBERON:0010371,2.03e-14,73;UBERON:0002420,7.50e-14,8;UBERON:0007245,7.50e-14,8;UBERON:0010009,7.50e-14,8;UBERON:0010011,7.50e-14,8;UBERON:0000454,7.50e-14,8;UBERON:0002950,1.68e-12,4;UBERON:0001891,1.68e-12,4;UBERON:0009616,1.68e-12,4;UBERON:0010286,1.68e-12,4;UBERON:0002616,5.93e-12,46;UBERON:0000955,1.24e-11,47;UBERON:0006238,1.24e-11,47;UBERON:0010314,1.57e-10,92;UBERON:0003080,1.74e-10,40;UBERON:0002257,2.11e-10,3;UBERON:0004684,3.46e-10,3;UBERON:0002275,3.46e-10,3;UBERON:0002038,9.17e-10,3;UBERON:0009663,9.17e-10,3;UBERON:0009661,9.17e-10,3;UBERON:0000125,9.17e-10,3;UBERON:0002308,9.17e-10,3;UBERON:0002780,4.22e-09,39;UBERON:0001890,4.22e-09,39;UBERON:0006240,4.22e-09,39;UBERON:0003528,7.34e-09,29;UBERON:0002791,7.34e-09,29;UBERON:0001893,7.34e-09,29;UBERON:0003056,4.44e-08,49;UBERON:0000025,1.19e-07,114;UBERON:0002256,5.50e-07,2;UBERON:0004111,7.30e-07,122;UBERON:0001896,8.88e-07,2;UBERON:0002298,8.88e-07,2;UBERON:0005290,8.88e-07,2;UBERON:0010096,8.88e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.540023753326763,0,1.14260393761521,2.65042249141936,0,0.383381884072945,0.919218786610021,3.30347642998166,1.14918604276669,2.76491759861238,2.50583946687368,3.84248103130121,2.08365348222704,1.11673199600552,2.8138130501584,1.5279824777681,2.94628585473668,1.42371680799103,2.79599168737951,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520455980298408,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,1.64769703345305,0,0.251308704225729,1.21677024134594,1.02286182932132,2.28566849015516,0.648965052271031,0.203678727700633,0.124406970610093,0,0.420883711772948,0.130120442962704,0.459804208866946,0.360124259610698,0.753524089178575,0.816437989815934,0.2562274405697,0.562210347358373,0.517406741478031,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,1.11218899690239,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0.902072229254653,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,1.28932855251423,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0,0,0,0.292255857911312,0.395287777946524,0.642642632843614,0,0.35613120733451,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,1.92903331528433,0.532020700926821,0.535106452806212,0.822745103010605,0,0,0,0,0,0.322928853391811,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.168956125490778,0.352071715937262,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0,2.07104124700728,0.103787347584177,0,0.682934423016537,0.486213434136588,0.419226325255965,0.367687016900028,0,0.412070114477788,0,0.252697211763798,0.25347929989024,0,0.280924522409647,0.512201219238954,0.17230640686684,0,0.231768651889711,0,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.365855945745545,1.05227884575137,0.543216455383447,0.561142271657738,0.118635018124174,0.689531376628944,0,0.464810523557898,0.192906610981141,0.999242311751784,0.701794825336225,0,0.382576664137687,0.882365676478062,0.231867835620421 | |||
|short_description=p3@Cbln2 | |||
}} |
Revision as of 16:55, 13 September 2013
Short description: | p3@Cbln2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cbln2_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_uc008fvb.1_5end |
EntrezGene: | Cbln2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.48e-32 | 23 |
neuroblast (sensu Vertebrata) | 6.48e-32 | 23 |
neuron | 3.36e-21 | 33 |
neuronal stem cell | 3.36e-21 | 33 |
neuroblast | 3.36e-21 | 33 |
electrically signaling cell | 3.36e-21 | 33 |
electrically responsive cell | 2.09e-17 | 39 |
electrically active cell | 2.09e-17 | 39 |
neural cell | 1.82e-15 | 43 |
ectodermal cell | 4.89e-15 | 44 |
neurectodermal cell | 4.89e-15 | 44 |
striatum neuron | 1.47e-10 | 3 |
neuron of the ventral spinal cord | 2.11e-10 | 3 |
raphe nuclei neuron | 3.46e-10 | 3 |
neuron of the substantia nigra | 9.17e-10 | 3 |
embryonic cell | 3.45e-08 | 70 |
neuron of the dorsal spinal cord | 5.50e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.