FFCP PHASE1:Mm9::chr2:79969097..79969153,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18573|HGNC=|MCL_coexpression_id=2|UniProt=Q8BRR9|association_with_transcript=0bp_to_NM_016744,uc012bxz.1_5end|description=CAGE_peak_2_at_Pde1a_5end|id=chr2:79969097..79969153,-|ontology_enrichment_celltype=CL:0002319!9.26e-13!43;CL:0000221!3.83e-12!44;CL:0000133!3.83e-12!44;CL:0000540!6.15e-12!33;CL:0000047!6.15e-12!33;CL:0000031!6.15e-12!33;CL:0000404!6.15e-12!33;CL:0000055!1.15e-11!50;CL:0000393!3.53e-11!39;CL:0000211!3.53e-11!39;CL:0000117!2.82e-08!23;CL:0000337!2.82e-08!23|ontology_enrichment_celltype_v019_2=CL:0002319,6.78e-08,43;CL:0000221,1.34e-07,44;CL:0000133,1.34e-07,44;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39;CL:0000540,2.08e-07,33;CL:0000047,2.08e-07,33;CL:0000031,2.08e-07,33;CL:0000404,2.08e-07,33;CL:0000117,8.07e-07,23;CL:0000337,8.07e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.48e-32!73;UBERON:0005743!3.48e-32!73;UBERON:0000073!5.00e-32!75;UBERON:0001016!5.00e-32!75;UBERON:0001049!1.18e-24!52;UBERON:0005068!1.18e-24!52;UBERON:0006241!1.18e-24!52;UBERON:0007135!1.18e-24!52;UBERON:0000955!2.79e-24!50;UBERON:0006238!2.79e-24!50;UBERON:0002616!1.65e-23!49;UBERON:0002346!2.76e-22!71;UBERON:0003075!2.76e-22!71;UBERON:0007284!2.76e-22!71;UBERON:0004121!6.06e-22!102;UBERON:0000924!6.06e-22!102;UBERON:0006601!6.06e-22!102;UBERON:0000033!2.11e-21!63;UBERON:0003080!5.31e-21!40;UBERON:0002780!2.92e-20!39;UBERON:0001890!2.92e-20!39;UBERON:0006240!2.92e-20!39;UBERON:0003056!4.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0002791!1.65e-16!29;UBERON:0003528!1.65e-16!29;UBERON:0001893!1.65e-16!29;UBERON:0000956!2.68e-12!21;UBERON:0001869!2.68e-12!21;UBERON:0000203!2.68e-12!21;UBERON:0002619!2.01e-11!17;UBERON:0007811!5.75e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!6.46e-08!94;UBERON:0000025!6.60e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-35,73;UBERON:0000073,4.32e-35,54;UBERON:0001016,4.22e-34,75;UBERON:0001049,2.58e-32,52;UBERON:0005068,2.58e-32,52;UBERON:0006241,2.58e-32,52;UBERON:0007135,2.58e-32,52;UBERON:0000955,3.41e-29,47;UBERON:0006238,3.41e-29,47;UBERON:0002346,7.03e-29,64;UBERON:0003075,7.03e-29,64;UBERON:0007284,7.03e-29,64;UBERON:0002616,6.18e-28,46;UBERON:0003080,3.09e-27,40;UBERON:0002780,5.35e-26,39;UBERON:0001890,5.35e-26,39;UBERON:0006240,5.35e-26,39;UBERON:0004121,3.11e-25,95;UBERON:0000924,3.11e-25,95;UBERON:0006601,3.11e-25,95;UBERON:0010371,8.26e-24,73;UBERON:0002020,1.72e-23,34;UBERON:0003056,6.16e-22,49;UBERON:0003528,1.84e-20,29;UBERON:0002791,1.84e-20,29;UBERON:0001893,1.84e-20,29;UBERON:0002619,6.98e-18,17;UBERON:0010314,2.04e-16,92;UBERON:0002021,4.09e-16,10;UBERON:0000411,4.09e-16,10;UBERON:0001950,4.09e-16,10;UBERON:0000956,7.11e-16,21;UBERON:0001869,7.11e-16,21;UBERON:0000203,7.11e-16,21;UBERON:0000025,3.00e-10,114;UBERON:0004111,7.13e-09,122;UBERON:0011216,3.84e-07,194|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.63580021170738,0.367093504323363,0,1.74420125104357,1.09843091367236,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0,6.60695285996332,8.17198963745201,7.0659005297872,0.659431438650969,0.548925861614458,1.04182674111352,1.95428099300967,6.75315132038016,17.1134037510027,2.94628585473668,3.84403538157578,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.04016005202667,32.4825428001225,4.64921102817598,119.417307972094,116.606248542631,19.1165000994795,34.8818715595679,0,0,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0,0,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,87.2703286541128,10.7020796874456,0,0,1.49301775374664,0,1.03093969057675,1.21010114774006,0.444756087689741,0.760902504450237,0,0.658795818896044,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0,0,0,0,0,0.630540576424764,0.8858587585951,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0,0,5.61927064957272,3.98519734413491,0,0,4.10160685241134,4.29482618726302,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,1.58115111178609,8.03303291054518,0,0,0,0,0,0.728341908464944,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,6.12791290356818,0.18006109403131,0,0.214337035031592,3.01478397191865,4.8159580752559,5.26556865926787,4.26250928760439,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.578574190077352,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,95.4430614022842,109.557406288708,95.6735507443792,85.5828848071564,106.18779056445,119.352235787573,125.554185043116,147.705354657544,154.974703872598,119.084871702919,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,1.32038438970253,0.561849044819294,0.704276676453562,1.43588672389033,0.476293691283074,0.811190281613988,0.192909220463705,2.06042950401653,1.17759136107518,0.342869252385415,0.70990322463735,1.43061713968393,1.16277133305863,0.564656282491984,0.423073039458382,1.46342378298218,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,1.23949472948773,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0|short_description=p2@Pde1a}} | ||
|EntrezGene=18573 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=Q8BRR9 | |||
|association_with_transcript=0bp_to_NM_016744,uc012bxz.1_5end | |||
|description=CAGE_peak_2_at_Pde1a_5end | |||
|id=chr2:79969097..79969153,- | |||
|ontology_enrichment_celltype=CL:0002319!9.26e-13!43;CL:0000221!3.83e-12!44;CL:0000133!3.83e-12!44;CL:0000540!6.15e-12!33;CL:0000047!6.15e-12!33;CL:0000031!6.15e-12!33;CL:0000404!6.15e-12!33;CL:0000055!1.15e-11!50;CL:0000393!3.53e-11!39;CL:0000211!3.53e-11!39;CL:0000117!2.82e-08!23;CL:0000337!2.82e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.78e-08,43;CL:0000221,1.34e-07,44;CL:0000133,1.34e-07,44;CL:0000393,1.79e-07,39;CL:0000211,1.79e-07,39;CL:0000540,2.08e-07,33;CL:0000047,2.08e-07,33;CL:0000031,2.08e-07,33;CL:0000404,2.08e-07,33;CL:0000117,8.07e-07,23;CL:0000337,8.07e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.48e-32!73;UBERON:0005743!3.48e-32!73;UBERON:0000073!5.00e-32!75;UBERON:0001016!5.00e-32!75;UBERON:0001049!1.18e-24!52;UBERON:0005068!1.18e-24!52;UBERON:0006241!1.18e-24!52;UBERON:0007135!1.18e-24!52;UBERON:0000955!2.79e-24!50;UBERON:0006238!2.79e-24!50;UBERON:0002616!1.65e-23!49;UBERON:0002346!2.76e-22!71;UBERON:0003075!2.76e-22!71;UBERON:0007284!2.76e-22!71;UBERON:0004121!6.06e-22!102;UBERON:0000924!6.06e-22!102;UBERON:0006601!6.06e-22!102;UBERON:0000033!2.11e-21!63;UBERON:0003080!5.31e-21!40;UBERON:0002780!2.92e-20!39;UBERON:0001890!2.92e-20!39;UBERON:0006240!2.92e-20!39;UBERON:0003056!4.70e-20!49;UBERON:0002020!4.40e-19!34;UBERON:0002791!1.65e-16!29;UBERON:0003528!1.65e-16!29;UBERON:0001893!1.65e-16!29;UBERON:0000956!2.68e-12!21;UBERON:0001869!2.68e-12!21;UBERON:0000203!2.68e-12!21;UBERON:0002619!2.01e-11!17;UBERON:0007811!5.75e-10!86;UBERON:0002021!1.19e-09!10;UBERON:0000411!1.19e-09!10;UBERON:0001950!1.19e-09!10;UBERON:0000153!6.46e-08!94;UBERON:0000025!6.60e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-35,73;UBERON:0000073,4.32e-35,54;UBERON:0001016,4.22e-34,75;UBERON:0001049,2.58e-32,52;UBERON:0005068,2.58e-32,52;UBERON:0006241,2.58e-32,52;UBERON:0007135,2.58e-32,52;UBERON:0000955,3.41e-29,47;UBERON:0006238,3.41e-29,47;UBERON:0002346,7.03e-29,64;UBERON:0003075,7.03e-29,64;UBERON:0007284,7.03e-29,64;UBERON:0002616,6.18e-28,46;UBERON:0003080,3.09e-27,40;UBERON:0002780,5.35e-26,39;UBERON:0001890,5.35e-26,39;UBERON:0006240,5.35e-26,39;UBERON:0004121,3.11e-25,95;UBERON:0000924,3.11e-25,95;UBERON:0006601,3.11e-25,95;UBERON:0010371,8.26e-24,73;UBERON:0002020,1.72e-23,34;UBERON:0003056,6.16e-22,49;UBERON:0003528,1.84e-20,29;UBERON:0002791,1.84e-20,29;UBERON:0001893,1.84e-20,29;UBERON:0002619,6.98e-18,17;UBERON:0010314,2.04e-16,92;UBERON:0002021,4.09e-16,10;UBERON:0000411,4.09e-16,10;UBERON:0001950,4.09e-16,10;UBERON:0000956,7.11e-16,21;UBERON:0001869,7.11e-16,21;UBERON:0000203,7.11e-16,21;UBERON:0000025,3.00e-10,114;UBERON:0004111,7.13e-09,122;UBERON:0011216,3.84e-07,194 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.2902381082794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.63580021170738,0.367093504323363,0,1.74420125104357,1.09843091367236,1.55543919259427,0.55994568650145,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.405017814995072,0.420649922702764,1.14260393761521,0.662605622854841,1.10241719293459,0.958454710182364,0,6.60695285996332,8.17198963745201,7.0659005297872,0.659431438650969,0.548925861614458,1.04182674111352,1.95428099300967,6.75315132038016,17.1134037510027,2.94628585473668,3.84403538157578,2.60959224155421,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.04016005202667,32.4825428001225,4.64921102817598,119.417307972094,116.606248542631,19.1165000994795,34.8818715595679,0,0,0.252722758433675,0.841767423545896,0.130120442962704,0.229902104433473,0.360124259610698,0.150704817835715,0,0,0.374806898238915,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,0,0,0,0,0,0,0,0,0,0,0,0,87.2703286541128,10.7020796874456,0,0,1.49301775374664,0,1.03093969057675,1.21010114774006,0.444756087689741,0.760902504450237,0,0.658795818896044,0.502670417600539,0,0.38992817423824,0,0,0,0,0,0,0,0.193952487167626,0,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0.162964976442026,0,0,0,0,0,0.630540576424764,0.8858587585951,0.797273843287435,0.163863314715738,0,0.144649058581512,0,0,0,0,5.61927064957272,3.98519734413491,0,0,4.10160685241134,4.29482618726302,0.861693590931196,0.716906393857656,1.55959071857676,0.849229592366497,0.809621403349789,0.292255857911312,1.58115111178609,8.03303291054518,0,0,0,0,0,0.728341908464944,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,6.12791290356818,0.18006109403131,0,0.214337035031592,3.01478397191865,4.8159580752559,5.26556865926787,4.26250928760439,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.406638934253697,0.324016022465404,0.627264888043406,0.218362563746178,0.674321731924103,0.578574190077352,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,95.4430614022842,109.557406288708,95.6735507443792,85.5828848071564,106.18779056445,119.352235787573,125.554185043116,147.705354657544,154.974703872598,119.084871702919,0.103787347584177,0,0.170733605754134,0.729320151204882,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,1.32038438970253,0.561849044819294,0.704276676453562,1.43588672389033,0.476293691283074,0.811190281613988,0.192909220463705,2.06042950401653,1.17759136107518,0.342869252385415,0.70990322463735,1.43061713968393,1.16277133305863,0.564656282491984,0.423073039458382,1.46342378298218,0.789209134313529,1.08643291076689,1.68342681497322,0.593175090620871,1.18205378850676,0.409231043169689,1.23949472948773,0.385813221962283,0.499621155875892,0.233931608445408,0.859484216193193,0.382576664137687,0,0 | |||
|short_description=p2@Pde1a | |||
}} |
Revision as of 00:43, 14 September 2013
Short description: | p2@Pde1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NM_016744, uc012bxz.1_5end |
EntrezGene: | Pde1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.78e-08 | 43 |
ectodermal cell | 1.34e-07 | 44 |
neurectodermal cell | 1.34e-07 | 44 |
electrically responsive cell | 1.79e-07 | 39 |
electrically active cell | 1.79e-07 | 39 |
neuron | 2.08e-07 | 33 |
neuronal stem cell | 2.08e-07 | 33 |
neuroblast | 2.08e-07 | 33 |
electrically signaling cell | 2.08e-07 | 33 |
CNS neuron (sensu Vertebrata) | 8.07e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.07e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.