FFCP PHASE1:Mm9::chr11:6428710..6428783,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=155|UniProt=|association_with_transcript=0bp_to_ENSMUST00000134527,ENSMUST00000147762,uc007hyu.1_5end|description=CAGE_peak_1_at_ENSMUST00000134527_5end,CAGE_peak_1_at_ENSMUST00000147762_5end,CAGE_peak_1_at_uc007hyu.1_5end|id=chr11:6428710..6428783,-|ontology_enrichment_celltype=CL:0000988!1.57e-14!32;CL:0002032!1.57e-14!32;CL:0000037!1.57e-14!32;CL:0000566!1.57e-14!32;CL:0000837!1.57e-14!32;CL:0002031!1.54e-10!25;CL:0002320!8.80e-09!46;CL:0000134!8.80e-09!46;CL:0000542!9.48e-09!13;CL:0000051!9.48e-09!13;CL:0000838!1.19e-08!12;CL:0000084!4.61e-08!11;CL:0000827!4.61e-08!11;CL:0000049!3.01e-07!19;CL:0000738!3.53e-07!17;CL:0002087!3.53e-07!17;CL:0000791!5.68e-07!9;CL:0000789!5.68e-07!9;CL:0002420!5.68e-07!9;CL:0002419!5.68e-07!9;CL:0000790!5.68e-07!9;CL:0000063!6.54e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,1.57e-14,32;CL:0002032,1.57e-14,32;CL:0000037,1.57e-14,32;CL:0000837,1.57e-14,32;CL:0002031,1.54e-10,25;CL:0002320,8.80e-09,46;CL:0000134,8.80e-09,46;CL:0000542,9.48e-09,13;CL:0000051,9.48e-09,13;CL:0000838,1.19e-08,12;CL:0000084,4.61e-08,11;CL:0000827,4.61e-08,11;CL:0000049,3.01e-07,19;CL:0000738,3.53e-07,17;CL:0002087,3.53e-07,17;CL:0000791,5.68e-07,9;CL:0000789,5.68e-07,9;CL:0002420,5.68e-07,9;CL:0002419,5.68e-07,9;CL:0000790,5.68e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.80e-09!46;UBERON:0002193!2.89e-07!48;UBERON:0002390!3.13e-07!45;UBERON:0003061!3.13e-07!45;UBERON:0001264!4.95e-07!12;UBERON:0003922!4.95e-07!12;UBERON:0002114!4.95e-07!12;UBERON:0003923!4.95e-07!12;UBERON:0003924!4.95e-07!12;UBERON:0003921!4.95e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.80e-09,46;UBERON:0002193,2.89e-07,48;UBERON:0002405,2.89e-07,48;UBERON:0002390,3.13e-07,45;UBERON:0003061,3.13e-07,45;UBERON:0001264,4.95e-07,12|phase1_expression=18.5772662641561,5.93258192986914,1.81999695755814,2.41971369045464,5.00895729946347,21.8243053485457,20.5579123724063,48.9377395843574,315.366737619733,309.901432850319,180.292520541457,146.701000392424,45.8817956215631,51.6654578296275,20.9859149943868,20.0450514715928,18.88817070946,26.6565529727711,27.834230021965,30.9804445812562,7.65389611359628,46.3688742108134,56.1579546648711,12.1594241322989,13.0763290208287,8.6134794617253,11.1998119001359,12.9282739611533,11.4014051673824,12.3494763582366,22.3947815761858,217.180490323194,165.452427860249,142.633512913895,62.3919498662753,45.0495888921514,66.5592101415323,3.34825304589526,6.2506827561904,1.57057123192139,3.52938892818609,0.683045484958446,2.42755176515577,39.6574976623068,38.016349207318,38.9119114582765,16.4302182313088,7.84890562969608,7.68901639570651,5.63846707315422,9.23910382727393,11.5002051491977,59.0594773323232,51.5007120828054,57.4720396533613,16.9791227783725,14.3266719969378,14.9544906760458,6.27181028664753,2.64495489636016,7.60597684207415,16.2645375393183,10.6715375533337,15.7482450524245,15.8218618010716,13.4991221839759,14.081205194365,11.9107674649682,5.91030790158323,8.91039192989158,7.78202357000113,8.2838785477103,7.28866185140325,6.49201235839256,6.42164655822184,6.43453150627015,2.20231761998777,3.31987079021488,4.76180253094355,6.06676923558892,6.22115976496386,8.33461392890816,3.90856198601933,5.06486349028512,4.12555268997387,8.54422897873636,5.55249555116501,8.94717339961443,24.8381914132844,6.95258352982427,14.4932244350839,9.46466264679525,31.2786813505565,3.2382191498269,5.84798775702902,5.37632264516803,7.44355426698285,9.20323741921512,9.35229616570328,7.77347063922748,10.140726223921,5.13305909657271,7.64415719119937,7.11066703153331,43.2982082022428,42.3110975343415,37.9143333761088,5.82337786567206,32.1082975722493,15.4379824627418,15.6136794089522,16.7456013071678,9.68585088475446,13.2635923686308,17.9910721917628,7.6656620711102,9.39340877390621,8.6759614151947,10.6153266233985,8.57364304721269,7.50861162765338,12.6067565815158,5.59175283654366,7.90508151931177,6.91174132484402,14.0501380364725,86.5065198932744,122.980059853649,76.7504171521311,5.84183493678809,5.49000723382352,11.1832373380449,5.73620256634512,7.92717917724025,4.77912502486988,5.02947915510049,17.720049309955,9.08170885453679,8.08712826987759,6.52369753248069,16.6554166992261,13.104419952708,9.72335500948886,14.1662528765572,12.5867523429957,13.1957131893395,10.1197862524507,14.2286853906459,14.0119195406347,16.6413350547681,14.2520410572799,20.604398848192,20.2974491934686,17.7608604926305,20.1666493679785,21.4957008163973,109.545257220865,82.0939823695941,59.6743348730745,9.94203708170409,17.12040237862,10.9837857491219,10.8902578369197,13.9702604540657,10.0273623376796,10.2314935690179,9.92611585178591,9.80828875884224,8.55711219550098,10.5067177010621,4.29664690593035,5.11699955988663,5.04965265169416,4.69722465661301,7.57043814830858,9.46722433889417,5.94753809370836,12.4291766331866,20.049095550312,19.043407092556,19.5878541209582,16.9414160683608,16.6783532883653,15.0278244628922,9.96511029243474,8.56434564564857,14.3261069016154,8.95304124185179,14.8172706210531,8.08937467788799,8.42938394511308,10.1562049359727,34.5195579734609,22.8497025219458,13.5249282807697,19.1432248174595,19.7831536910978,20.6199310477537,6.32365371242573,5.01874503130647,7.06494275286187,5.55287237648102,10.9687472022245,24.859920751698,23.5870794135844,17.0895205412489,17.0402501966342,15.1941610644023,26.2264627334862,17.2617682470486,30.1571521801566,10.4333337011471,14.3768206527355,8.93138274404408,7.48890415474945,6.56705082662491,4.84373016509163,7.23665282045051,6.09685527549795,25.9603234125564,18.2520773615069,19.860175035697,12.2038929110021,11.5579317634853,6.9032655856944,8.39074685788535,7.25121662888479,6.42247599981447,7.81328366421687,6.55453258862952,6.38934432903814,6.07526046042349,12.0633027151418,16.3171705145613,15.7364567366092,21.7990029580739,2.56880943980467,5.62616095642575,14.5902101385241,5.55436039849621,31.8663301610419,29.2829058222479,23.0503035574095,36.0842884908354,31.4146130456176,24.9107347094173,31.1704240289669,32.7326560860669,24.5078422326845,9.96096080907602,17.0328102249922,19.2310851960636,14.985600260529,12.3727592229402,47.7882498023866,24.2780636154981,29.0230614686161,41.8703277058094,42.5234725748313,43.0409207121498,38.5058156820649,39.2616427835706,26.3808060004694,66.999792682393,48.4925599444994,48.4737053266478,10.2131881726136,12.9643987702543,15.264324686365,9.64516657642165,10.995094485821,7.31312152168489,10.3665882979336,10.656273219011,8.91752490642099,7.62595455109753,23.5965385918809,15.4993077764991,20.8289110437718,14.8369795323263,15.0409153443952,19.0403443704271,10.7847909553045,3.8939313422207,15.036637510211,15.8917888331681,18.7046472643409,14.8811081033706,18.8638034255015,18.0734756833153,61.3622132277818,53.18155188299,49.0609907005704,23.8667654503778,21.1945115699361,21.1452245811923,19.9809880520332,20.4906530094179,19.4342681734098,13.7561633312517,14.0510874733071,9.6849698534091,8.68420321055012,12.4267862617385,5.6369293868419,16.1477869727497,16.0494735743385,12.8337784307071,9.42866711387437,13.8544022902438,19.3639443765494,10.54655517236,10.0664970648682,10.3881171955183,5.76060012515731,15.1685337901526,21.8943232513377,25.1641845053827,35.3384638499602,22.1993102627677,15.8945083825012,16.8273629327956,20.3811547500917,15.9526990918073,21.49031947671,17.9470609543576,15.6907187991001,18.9537328031449,14.4927358705145,9.29594572822367,31.5220053791172,34.0015516549913,32.4017309582671,15.8415467106396,14.2638681342898,18.1320108024592,14.7914181564555,24.0754609936974,9.60078132449013,7.82552902062201,6.87474616127276,5.15559547031063,7.53590771747707,8.3093328712867,6.07520250208625,7.65546045481175,9.06284817968409,4.65984280576638,10.4825221060018,17.9561193030464,15.0245573063638,16.531256760644,15.3017608718427,12.1336715577009,16.4462578573195,17.1009097508282,17.0087181083662,15.6672271293554,23.5735748897923,13.2038438970253,14.0462261204824,12.9971059381885,11.0276100394777,14.2888107384922,9.85016770531272,10.6100071255038,13.5988347265091,10.3039244094078,19.2006781335833,16.1502983604997,17.1674056762071,13.3718703301742,13.1753132581463,12.7768057916432,16.2805895856768,14.994973551957,11.2717414492065,18.5176949647054,13.4057570480317,13.3966096030766,11.0492381655816,12.7048209772492,14.4679958235856,10.4920442733937,10.9947855969342,12.8922632428979,17.9811032144713,10.8089795368563,9.27471342481686|short_description=p1@ENSMUST00000134527,p1@ENSMUST00000147762,p1@uc007hyu.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=155 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000134527,ENSMUST00000147762,uc007hyu.1_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000134527_5end,CAGE_peak_1_at_ENSMUST00000147762_5end,CAGE_peak_1_at_uc007hyu.1_5end | |||
|id=chr11:6428710..6428783,- | |||
|ontology_enrichment_celltype=CL:0000988!1.57e-14!32;CL:0002032!1.57e-14!32;CL:0000037!1.57e-14!32;CL:0000566!1.57e-14!32;CL:0000837!1.57e-14!32;CL:0002031!1.54e-10!25;CL:0002320!8.80e-09!46;CL:0000134!8.80e-09!46;CL:0000542!9.48e-09!13;CL:0000051!9.48e-09!13;CL:0000838!1.19e-08!12;CL:0000084!4.61e-08!11;CL:0000827!4.61e-08!11;CL:0000049!3.01e-07!19;CL:0000738!3.53e-07!17;CL:0002087!3.53e-07!17;CL:0000791!5.68e-07!9;CL:0000789!5.68e-07!9;CL:0002420!5.68e-07!9;CL:0002419!5.68e-07!9;CL:0000790!5.68e-07!9;CL:0000063!6.54e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.57e-14,32;CL:0002032,1.57e-14,32;CL:0000037,1.57e-14,32;CL:0000837,1.57e-14,32;CL:0002031,1.54e-10,25;CL:0002320,8.80e-09,46;CL:0000134,8.80e-09,46;CL:0000542,9.48e-09,13;CL:0000051,9.48e-09,13;CL:0000838,1.19e-08,12;CL:0000084,4.61e-08,11;CL:0000827,4.61e-08,11;CL:0000049,3.01e-07,19;CL:0000738,3.53e-07,17;CL:0002087,3.53e-07,17;CL:0000791,5.68e-07,9;CL:0000789,5.68e-07,9;CL:0002420,5.68e-07,9;CL:0002419,5.68e-07,9;CL:0000790,5.68e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.80e-09!46;UBERON:0002193!2.89e-07!48;UBERON:0002390!3.13e-07!45;UBERON:0003061!3.13e-07!45;UBERON:0001264!4.95e-07!12;UBERON:0003922!4.95e-07!12;UBERON:0002114!4.95e-07!12;UBERON:0003923!4.95e-07!12;UBERON:0003924!4.95e-07!12;UBERON:0003921!4.95e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.80e-09,46;UBERON:0002193,2.89e-07,48;UBERON:0002405,2.89e-07,48;UBERON:0002390,3.13e-07,45;UBERON:0003061,3.13e-07,45;UBERON:0001264,4.95e-07,12 | |||
|phase1_expression=18.5772662641561,5.93258192986914,1.81999695755814,2.41971369045464,5.00895729946347,21.8243053485457,20.5579123724063,48.9377395843574,315.366737619733,309.901432850319,180.292520541457,146.701000392424,45.8817956215631,51.6654578296275,20.9859149943868,20.0450514715928,18.88817070946,26.6565529727711,27.834230021965,30.9804445812562,7.65389611359628,46.3688742108134,56.1579546648711,12.1594241322989,13.0763290208287,8.6134794617253,11.1998119001359,12.9282739611533,11.4014051673824,12.3494763582366,22.3947815761858,217.180490323194,165.452427860249,142.633512913895,62.3919498662753,45.0495888921514,66.5592101415323,3.34825304589526,6.2506827561904,1.57057123192139,3.52938892818609,0.683045484958446,2.42755176515577,39.6574976623068,38.016349207318,38.9119114582765,16.4302182313088,7.84890562969608,7.68901639570651,5.63846707315422,9.23910382727393,11.5002051491977,59.0594773323232,51.5007120828054,57.4720396533613,16.9791227783725,14.3266719969378,14.9544906760458,6.27181028664753,2.64495489636016,7.60597684207415,16.2645375393183,10.6715375533337,15.7482450524245,15.8218618010716,13.4991221839759,14.081205194365,11.9107674649682,5.91030790158323,8.91039192989158,7.78202357000113,8.2838785477103,7.28866185140325,6.49201235839256,6.42164655822184,6.43453150627015,2.20231761998777,3.31987079021488,4.76180253094355,6.06676923558892,6.22115976496386,8.33461392890816,3.90856198601933,5.06486349028512,4.12555268997387,8.54422897873636,5.55249555116501,8.94717339961443,24.8381914132844,6.95258352982427,14.4932244350839,9.46466264679525,31.2786813505565,3.2382191498269,5.84798775702902,5.37632264516803,7.44355426698285,9.20323741921512,9.35229616570328,7.77347063922748,10.140726223921,5.13305909657271,7.64415719119937,7.11066703153331,43.2982082022428,42.3110975343415,37.9143333761088,5.82337786567206,32.1082975722493,15.4379824627418,15.6136794089522,16.7456013071678,9.68585088475446,13.2635923686308,17.9910721917628,7.6656620711102,9.39340877390621,8.6759614151947,10.6153266233985,8.57364304721269,7.50861162765338,12.6067565815158,5.59175283654366,7.90508151931177,6.91174132484402,14.0501380364725,86.5065198932744,122.980059853649,76.7504171521311,5.84183493678809,5.49000723382352,11.1832373380449,5.73620256634512,7.92717917724025,4.77912502486988,5.02947915510049,17.720049309955,9.08170885453679,8.08712826987759,6.52369753248069,16.6554166992261,13.104419952708,9.72335500948886,14.1662528765572,12.5867523429957,13.1957131893395,10.1197862524507,14.2286853906459,14.0119195406347,16.6413350547681,14.2520410572799,20.604398848192,20.2974491934686,17.7608604926305,20.1666493679785,21.4957008163973,109.545257220865,82.0939823695941,59.6743348730745,9.94203708170409,17.12040237862,10.9837857491219,10.8902578369197,13.9702604540657,10.0273623376796,10.2314935690179,9.92611585178591,9.80828875884224,8.55711219550098,10.5067177010621,4.29664690593035,5.11699955988663,5.04965265169416,4.69722465661301,7.57043814830858,9.46722433889417,5.94753809370836,12.4291766331866,20.049095550312,19.043407092556,19.5878541209582,16.9414160683608,16.6783532883653,15.0278244628922,9.96511029243474,8.56434564564857,14.3261069016154,8.95304124185179,14.8172706210531,8.08937467788799,8.42938394511308,10.1562049359727,34.5195579734609,22.8497025219458,13.5249282807697,19.1432248174595,19.7831536910978,20.6199310477537,6.32365371242573,5.01874503130647,7.06494275286187,5.55287237648102,10.9687472022245,24.859920751698,23.5870794135844,17.0895205412489,17.0402501966342,15.1941610644023,26.2264627334862,17.2617682470486,30.1571521801566,10.4333337011471,14.3768206527355,8.93138274404408,7.48890415474945,6.56705082662491,4.84373016509163,7.23665282045051,6.09685527549795,25.9603234125564,18.2520773615069,19.860175035697,12.2038929110021,11.5579317634853,6.9032655856944,8.39074685788535,7.25121662888479,6.42247599981447,7.81328366421687,6.55453258862952,6.38934432903814,6.07526046042349,12.0633027151418,16.3171705145613,15.7364567366092,21.7990029580739,2.56880943980467,5.62616095642575,14.5902101385241,5.55436039849621,31.8663301610419,29.2829058222479,23.0503035574095,36.0842884908354,31.4146130456176,24.9107347094173,31.1704240289669,32.7326560860669,24.5078422326845,9.96096080907602,17.0328102249922,19.2310851960636,14.985600260529,12.3727592229402,47.7882498023866,24.2780636154981,29.0230614686161,41.8703277058094,42.5234725748313,43.0409207121498,38.5058156820649,39.2616427835706,26.3808060004694,66.999792682393,48.4925599444994,48.4737053266478,10.2131881726136,12.9643987702543,15.264324686365,9.64516657642165,10.995094485821,7.31312152168489,10.3665882979336,10.656273219011,8.91752490642099,7.62595455109753,23.5965385918809,15.4993077764991,20.8289110437718,14.8369795323263,15.0409153443952,19.0403443704271,10.7847909553045,3.8939313422207,15.036637510211,15.8917888331681,18.7046472643409,14.8811081033706,18.8638034255015,18.0734756833153,61.3622132277818,53.18155188299,49.0609907005704,23.8667654503778,21.1945115699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| |||
|short_description=p1@ENSMUST00000134527,p1@ENSMUST00000147762,p1@uc007hyu.1 | |||
}} |
Revision as of 20:21, 12 September 2013
Short description: | p1@ENSMUST00000134527, p1@ENSMUST00000147762, p1@uc007hyu.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000134527_5end, CAGE_peak_1_at_ENSMUST00000147762_5end, CAGE_peak_1_at_uc007hyu.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000134527, ENSMUST00000147762, uc007hyu.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.57e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.57e-14 | 32 |
hematopoietic stem cell | 1.57e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.57e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.54e-10 | 25 |
connective tissue cell | 8.80e-09 | 46 |
mesenchymal cell | 8.80e-09 | 46 |
lymphocyte | 9.48e-09 | 13 |
common lymphoid progenitor | 9.48e-09 | 13 |
lymphoid lineage restricted progenitor cell | 1.19e-08 | 12 |
T cell | 4.61e-08 | 11 |
pro-T cell | 4.61e-08 | 11 |
common myeloid progenitor | 3.01e-07 | 19 |
leukocyte | 3.53e-07 | 17 |
nongranular leukocyte | 3.53e-07 | 17 |
mature alpha-beta T cell | 5.68e-07 | 9 |
alpha-beta T cell | 5.68e-07 | 9 |
immature T cell | 5.68e-07 | 9 |
mature T cell | 5.68e-07 | 9 |
immature alpha-beta T cell | 5.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.80e-09 | 46 |
hemolymphoid system | 2.89e-07 | 48 |
immune system | 2.89e-07 | 48 |
hematopoietic system | 3.13e-07 | 45 |
blood island | 3.13e-07 | 45 |
pancreas | 4.95e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.