FFCP PHASE1:Mm9::chr4:110024515..110024550,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15572|HGNC=|MCL_coexpression_id=22|UniProt=A2A9S3,Q9CXQ0,B1AXZ0|association_with_transcript=0bp_to_NM_001163397,uc008ucz.2_5end|description=CAGE_peak_4_at_Elavl4_5end|id=chr4:110024515..110024550,-|ontology_enrichment_celltype=CL:0000540!3.52e-16!33;CL:0000047!3.52e-16!33;CL:0000031!3.52e-16!33;CL:0000404!3.52e-16!33;CL:0000117!9.97e-16!23;CL:0000337!9.97e-16!23;CL:0002319!9.80e-13!43;CL:0000221!1.39e-12!44;CL:0000133!1.39e-12!44;CL:0000393!7.45e-12!39;CL:0000211!7.45e-12!39;CL:0000055!6.08e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.59e-25,23;CL:0000337,6.59e-25,23;CL:0000540,4.04e-21,33;CL:0000047,4.04e-21,33;CL:0000031,4.04e-21,33;CL:0000404,4.04e-21,33;CL:0000393,1.47e-16,39;CL:0000211,1.47e-16,39;CL:0002319,1.54e-15,43;CL:0000221,5.44e-15,44;CL:0000133,5.44e-15,44;CL:0002609,2.54e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.89e-24!73;UBERON:0005743!8.89e-24!73;UBERON:0000073!1.34e-23!75;UBERON:0001016!1.34e-23!75;UBERON:0002346!1.58e-19!71;UBERON:0003075!1.58e-19!71;UBERON:0007284!1.58e-19!71;UBERON:0001049!2.23e-19!52;UBERON:0005068!2.23e-19!52;UBERON:0006241!2.23e-19!52;UBERON:0007135!2.23e-19!52;UBERON:0002020!6.79e-19!34;UBERON:0004121!1.25e-18!102;UBERON:0000924!1.25e-18!102;UBERON:0006601!1.25e-18!102;UBERON:0003056!9.56e-18!49;UBERON:0002616!5.04e-17!49;UBERON:0000033!9.60e-17!63;UBERON:0000955!2.81e-16!50;UBERON:0006238!2.81e-16!50;UBERON:0003080!7.32e-16!40;UBERON:0002791!1.45e-15!29;UBERON:0003528!1.45e-15!29;UBERON:0001893!1.45e-15!29;UBERON:0002780!2.84e-15!39;UBERON:0001890!2.84e-15!39;UBERON:0006240!2.84e-15!39;UBERON:0000956!1.89e-11!21;UBERON:0001869!1.89e-11!21;UBERON:0000203!1.89e-11!21;UBERON:0002619!1.28e-08!17;UBERON:0000153!6.39e-08!94;UBERON:0007811!1.02e-07!86;UBERON:0002021!3.69e-07!10;UBERON:0000411!3.69e-07!10;UBERON:0001950!3.69e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.05e-28,34;UBERON:0002346,2.01e-24,64;UBERON:0003075,2.01e-24,64;UBERON:0007284,2.01e-24,64;UBERON:0001017,2.33e-24,73;UBERON:0001016,2.44e-23,75;UBERON:0004121,5.49e-23,95;UBERON:0000924,5.49e-23,95;UBERON:0006601,5.49e-23,95;UBERON:0003056,7.92e-23,49;UBERON:0003528,8.86e-23,29;UBERON:0002791,8.86e-23,29;UBERON:0001893,8.86e-23,29;UBERON:0000073,5.54e-22,54;UBERON:0001049,1.54e-20,52;UBERON:0005068,1.54e-20,52;UBERON:0006241,1.54e-20,52;UBERON:0007135,1.54e-20,52;UBERON:0010371,8.12e-20,73;UBERON:0003080,1.36e-18,40;UBERON:0000956,3.61e-18,21;UBERON:0001869,3.61e-18,21;UBERON:0000203,3.61e-18,21;UBERON:0002780,1.13e-17,39;UBERON:0001890,1.13e-17,39;UBERON:0006240,1.13e-17,39;UBERON:0010314,1.39e-16,92;UBERON:0002616,5.23e-15,46;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002619,2.50e-13,17;UBERON:0002021,1.39e-09,10;UBERON:0000411,1.39e-09,10;UBERON:0001950,1.39e-09,10;UBERON:0002240,1.09e-07,6;UBERON:0005174,1.09e-07,6;UBERON:0001137,1.09e-07,6;UBERON:0001948,7.32e-07,5;UBERON:0002315,7.32e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,7.68802551266472,6.87688273053643,4.43681982454325,0,0,0,0,0,0.299600110518405,0,7.56934169851887,6.61529097825284,5.46844899513593,1.99955689082663,2.42955395046775,6.98197555525238,6.22995561618536,5.51531271966013,1.10115880999389,1.27687338085188,1.68967186581868,6.85808696197008,6.03818447775904,4.16730696445408,0.279182999001381,1.68828783009504,1.68078072554491,1.76777151284201,3.70166370077668,4.28718725398191,0.151452386666368,0.226714680320357,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,1.21439728736295,0.913396434936424,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.79748767285787,0.915001205637253,5.52879149296603,2.60736480288415,2.30143911597297,1.66230435647648,0.648965052271031,0.305518091550949,0,0,0,1.04096354370163,1.14951052216736,1.98068342785884,1.05493372485001,1.7009124787832,1.2811372028485,2.62364828767241,0,1.29340795759705,1.13463648100692,0.703804496655795,0.657587197282725,0,0.348252166522167,0,0.59710280045548,0,0,0,0.828503090142008,1.17263029990548,1.08037236876609,0,0.983821158737019,0.462801338662135,0.232533944750408,1.07309360559848,0.467061369468678,0.493679549740441,0.164167464079095,0,0.146199987425332,0,0,2.52347938276953,6.17427674275707,0,0,1.2797295032114,0.696710015581316,0.38660238396628,1.21010114774006,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.571242563048644,0,1.22190796707189,0.581857461502877,0.561086559122548,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.339490171550376,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.780877488593277,1.07711698866399,0.955875191810208,1.11399337041197,1.69845918473299,0.404810701674894,0.292255857911312,1.18586333383957,0,0.425820255624806,0.178065603667255,0.977321756121456,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.857348140126369,0.532020700926821,0.535106452806212,1.31639216481697,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0.139951452323658,0,0,0.949007980743406,0.609958401380546,0.324016022465404,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0,0,10.1464728963154,0.598066184175915,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.821500670520278,0.651021924219751,0.314578033277133,0.241584120826006,1.72818003754719,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,4.51801474093653,3.22227665555024,2.86447756719698,2.92150409984269,1.37016503954128,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,3.10656187051092,1.03787347584177,0.798049746802062,0.341467211508268,0.729320151204882,1.04806581313991,0.735374033800057,1.33348036680969,0.412070114477788,1.92551525755089,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,1.02440243847791,0.861532034334199,0.952587382566147,0.927074607558844,1.73618298417335,0,1.91358596174717,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.761531471025089,0.914639864363863,0.526139422875686,1.22223702461276,0,1.30498519936592,0.689531376628944,0.409231043169689,0.464810523557898,1.73615949883027,2.99772693525535,0.233931608445408,0.644613162144895,0.382576664137687,0,0|short_description=p4@Elavl4}} | ||
|EntrezGene=15572 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=A2A9S3,Q9CXQ0,B1AXZ0 | |||
|association_with_transcript=0bp_to_NM_001163397,uc008ucz.2_5end | |||
|description=CAGE_peak_4_at_Elavl4_5end | |||
|id=chr4:110024515..110024550,- | |||
|ontology_enrichment_celltype=CL:0000540!3.52e-16!33;CL:0000047!3.52e-16!33;CL:0000031!3.52e-16!33;CL:0000404!3.52e-16!33;CL:0000117!9.97e-16!23;CL:0000337!9.97e-16!23;CL:0002319!9.80e-13!43;CL:0000221!1.39e-12!44;CL:0000133!1.39e-12!44;CL:0000393!7.45e-12!39;CL:0000211!7.45e-12!39;CL:0000055!6.08e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.59e-25,23;CL:0000337,6.59e-25,23;CL:0000540,4.04e-21,33;CL:0000047,4.04e-21,33;CL:0000031,4.04e-21,33;CL:0000404,4.04e-21,33;CL:0000393,1.47e-16,39;CL:0000211,1.47e-16,39;CL:0002319,1.54e-15,43;CL:0000221,5.44e-15,44;CL:0000133,5.44e-15,44;CL:0002609,2.54e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.89e-24!73;UBERON:0005743!8.89e-24!73;UBERON:0000073!1.34e-23!75;UBERON:0001016!1.34e-23!75;UBERON:0002346!1.58e-19!71;UBERON:0003075!1.58e-19!71;UBERON:0007284!1.58e-19!71;UBERON:0001049!2.23e-19!52;UBERON:0005068!2.23e-19!52;UBERON:0006241!2.23e-19!52;UBERON:0007135!2.23e-19!52;UBERON:0002020!6.79e-19!34;UBERON:0004121!1.25e-18!102;UBERON:0000924!1.25e-18!102;UBERON:0006601!1.25e-18!102;UBERON:0003056!9.56e-18!49;UBERON:0002616!5.04e-17!49;UBERON:0000033!9.60e-17!63;UBERON:0000955!2.81e-16!50;UBERON:0006238!2.81e-16!50;UBERON:0003080!7.32e-16!40;UBERON:0002791!1.45e-15!29;UBERON:0003528!1.45e-15!29;UBERON:0001893!1.45e-15!29;UBERON:0002780!2.84e-15!39;UBERON:0001890!2.84e-15!39;UBERON:0006240!2.84e-15!39;UBERON:0000956!1.89e-11!21;UBERON:0001869!1.89e-11!21;UBERON:0000203!1.89e-11!21;UBERON:0002619!1.28e-08!17;UBERON:0000153!6.39e-08!94;UBERON:0007811!1.02e-07!86;UBERON:0002021!3.69e-07!10;UBERON:0000411!3.69e-07!10;UBERON:0001950!3.69e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.05e-28,34;UBERON:0002346,2.01e-24,64;UBERON:0003075,2.01e-24,64;UBERON:0007284,2.01e-24,64;UBERON:0001017,2.33e-24,73;UBERON:0001016,2.44e-23,75;UBERON:0004121,5.49e-23,95;UBERON:0000924,5.49e-23,95;UBERON:0006601,5.49e-23,95;UBERON:0003056,7.92e-23,49;UBERON:0003528,8.86e-23,29;UBERON:0002791,8.86e-23,29;UBERON:0001893,8.86e-23,29;UBERON:0000073,5.54e-22,54;UBERON:0001049,1.54e-20,52;UBERON:0005068,1.54e-20,52;UBERON:0006241,1.54e-20,52;UBERON:0007135,1.54e-20,52;UBERON:0010371,8.12e-20,73;UBERON:0003080,1.36e-18,40;UBERON:0000956,3.61e-18,21;UBERON:0001869,3.61e-18,21;UBERON:0000203,3.61e-18,21;UBERON:0002780,1.13e-17,39;UBERON:0001890,1.13e-17,39;UBERON:0006240,1.13e-17,39;UBERON:0010314,1.39e-16,92;UBERON:0002616,5.23e-15,46;UBERON:0000955,1.67e-14,47;UBERON:0006238,1.67e-14,47;UBERON:0002619,2.50e-13,17;UBERON:0002021,1.39e-09,10;UBERON:0000411,1.39e-09,10;UBERON:0001950,1.39e-09,10;UBERON:0002240,1.09e-07,6;UBERON:0005174,1.09e-07,6;UBERON:0001137,1.09e-07,6;UBERON:0001948,7.32e-07,5;UBERON:0002315,7.32e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,7.68802551266472,6.87688273053643,4.43681982454325,0,0,0,0,0,0.299600110518405,0,7.56934169851887,6.61529097825284,5.46844899513593,1.99955689082663,2.42955395046775,6.98197555525238,6.22995561618536,5.51531271966013,1.10115880999389,1.27687338085188,1.68967186581868,6.85808696197008,6.03818447775904,4.16730696445408,0.279182999001381,1.68828783009504,1.68078072554491,1.76777151284201,3.70166370077668,4.28718725398191,0.151452386666368,0.226714680320357,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,1.21439728736295,0.913396434936424,0,0,0.470354828542819,0,0,0,0,0,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.79748767285787,0.915001205637253,5.52879149296603,2.60736480288415,2.30143911597297,1.66230435647648,0.648965052271031,0.305518091550949,0,0,0,1.04096354370163,1.14951052216736,1.98068342785884,1.05493372485001,1.7009124787832,1.2811372028485,2.62364828767241,0,1.29340795759705,1.13463648100692,0.703804496655795,0.657587197282725,0,0.348252166522167,0,0.59710280045548,0,0,0,0.828503090142008,1.17263029990548,1.08037236876609,0,0.983821158737019,0.462801338662135,0.232533944750408,1.07309360559848,0.467061369468678,0.493679549740441,0.164167464079095,0,0.146199987425332,0,0,2.52347938276953,6.17427674275707,0,0,1.2797295032114,0.696710015581316,0.38660238396628,1.21010114774006,0.22237804384487,0.380451252225118,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.948339504765408,0.571242563048644,0,1.22190796707189,0.581857461502877,0.561086559122548,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0.339490171550376,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0.780877488593277,1.07711698866399,0.955875191810208,1.11399337041197,1.69845918473299,0.404810701674894,0.292255857911312,1.18586333383957,0,0.425820255624806,0.178065603667255,0.977321756121456,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0.857348140126369,0.532020700926821,0.535106452806212,1.31639216481697,0,0,0,0,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0.139951452323658,0,0,0.949007980743406,0.609958401380546,0.324016022465404,0.418176592028937,0,0.269728692769641,0.165306911450672,0,0,0,10.1464728963154,0.598066184175915,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.821500670520278,0.651021924219751,0.314578033277133,0.241584120826006,1.72818003754719,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0.179427713218951,0,0,0,0,0,0,4.51801474093653,3.22227665555024,2.86447756719698,2.92150409984269,1.37016503954128,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,3.10656187051092,1.03787347584177,0.798049746802062,0.341467211508268,0.729320151204882,1.04806581313991,0.735374033800057,1.33348036680969,0.412070114477788,1.92551525755089,1.26348605881899,1.01391719956096,1.13175804831646,0.749132059759059,1.02440243847791,0.861532034334199,0.952587382566147,0.927074607558844,1.73618298417335,0,1.91358596174717,1.02860775715625,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.761531471025089,0.914639864363863,0.526139422875686,1.22223702461276,0,1.30498519936592,0.689531376628944,0.409231043169689,0.464810523557898,1.73615949883027,2.99772693525535,0.233931608445408,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p4@Elavl4 | |||
}} |
Revision as of 03:26, 14 September 2013
Short description: | p4@Elavl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Elavl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_NM_001163397, uc008ucz.2_5end |
EntrezGene: | Elavl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.59e-25 | 23 |
neuroblast (sensu Vertebrata) | 6.59e-25 | 23 |
neuron | 4.04e-21 | 33 |
neuronal stem cell | 4.04e-21 | 33 |
neuroblast | 4.04e-21 | 33 |
electrically signaling cell | 4.04e-21 | 33 |
electrically responsive cell | 1.47e-16 | 39 |
electrically active cell | 1.47e-16 | 39 |
neural cell | 1.54e-15 | 43 |
ectodermal cell | 5.44e-15 | 44 |
neurectodermal cell | 5.44e-15 | 44 |
neuron of cerebral cortex | 2.54e-09 | 6 |
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